Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is 187734081

Identifier: 187734081

GI number: 187734081

Start: 3075404

End: 3076042

Strand: Reverse

Name: 187734081

Synonym: SbBS512_E3301

Alternate gene names: NA

Gene position: 3076042-3075404 (Counterclockwise)

Preceding gene: 187733613

Following gene: 187733179

Centisome position: 66.64

GC content: 48.04

Gene sequence:

>639_bases
GTGTTTGAAGCAGAAGCTTTTAATTGCCCTCACTGCGGTGTATATGCCCGTCAGTTCTGGCGTAGTATGTATGGTAATTC
GAATGTGCTTGCGGTCAAATCAACTGAGTTCCGAATGTCAACATGCTCTCATTGTGGTGAAGATGCCTATTGGTATCAGG
GCAACATGTTGATCCCTGCGGCTGGCAATGTTGAACTCCCAAACCCAGACATGCCCGATGACTGCAAGTCAGACTATATG
GAAGCTAGAAGCATCATTAATCTGTCTCCTAAAGGCGCAGCAGCACTCCTTCGTCTTTGCCTCCAAAAGCTAATGGTCCA
CTTAGGCGAACCGGGAAACAACATTAATGCTGACATTCGGTCACTCGTCCAGAAAGGACTACCTGTACGCATTCAGCAGG
CAGCAGACATCTGTCGTATCGTTGGCAATCAGGCGGTCCATCCAGGAGAGATTAGCCTTGATGACGACCCACAGTTGGCA
CATGGTCTCTTTAAGCTGTTGAACATTATTGTCACTGAGCAGATTACCAGACCGAAAGAAATTGAGGCTATGTTCCAGAG
TATGCCTGAAGGTCCACGCCAAGGTATTGAGAATCAGGACAGACAGGCGAGGGAACAGCAGCAGGCTGCTAATGAATAA

Upstream 100 bases:

>100_bases
TACGACCGTTACGCGAAAGAGGTTGAGGTAGATAGATTGGTTAATGTGATGGCTGGTGTTTATAAGGAGACTGGAGTAAA
TGGCTGAGTATTATCCGGCG

Downstream 100 bases:

>100_bases
AACCCACACTATAGGGGGAAGGGGGACTAAACTATCACTATAGGGAGAGACCCTAAGTCCCCCCGGCTTAATACAGCCAC
CGACCCACACATTCATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEFRMSTCSHCGEDAYWYQGNMLIPAAGNVELPNPDMPDDCKSDYM
EARSIINLSPKGAAALLRLCLQKLMVHLGEPGNNINADIRSLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLA
HGLFKLLNIIVTEQITRPKEIEAMFQSMPEGPRQGIENQDRQAREQQQAANE

Sequences:

>Translated_212_residues
MFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEFRMSTCSHCGEDAYWYQGNMLIPAAGNVELPNPDMPDDCKSDYM
EARSIINLSPKGAAALLRLCLQKLMVHLGEPGNNINADIRSLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLA
HGLFKLLNIIVTEQITRPKEIEAMFQSMPEGPRQGIENQDRQAREQQQAANE
>Mature_212_residues
MFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEFRMSTCSHCGEDAYWYQGNMLIPAAGNVELPNPDMPDDCKSDYM
EARSIINLSPKGAAALLRLCLQKLMVHLGEPGNNINADIRSLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLA
HGLFKLLNIIVTEQITRPKEIEAMFQSMPEGPRQGIENQDRQAREQQQAANE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23644; Mature: 23644

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEFRMSTCSHCGEDAYWYQGNMLIPA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCEEEEC
AGNVELPNPDMPDDCKSDYMEARSIINLSPKGAAALLRLCLQKLMVHLGEPGNNINADIR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLAHGLFKLLNIIVTEQITRPKE
HHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
IEAMFQSMPEGPRQGIENQDRQAREQQQAANE
HHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEFRMSTCSHCGEDAYWYQGNMLIPA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCEEEEC
AGNVELPNPDMPDDCKSDYMEARSIINLSPKGAAALLRLCLQKLMVHLGEPGNNINADIR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLAHGLFKLLNIIVTEQITRPKE
HHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
IEAMFQSMPEGPRQGIENQDRQAREQQQAANE
HHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA