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The map label for this gene is stfR [H]

Identifier: 187731452

GI number: 187731452

Start: 999404

End: 1000639

Strand: Direct

Name: stfR [H]

Synonym: SbBS512_E1096

Alternate gene names: 187731452

Gene position: 999404-1000639 (Clockwise)

Preceding gene: 187732821

Following gene: 187731923

Centisome position: 21.65

GC content: 52.43

Gene sequence:

>1236_bases
ATGACAGTAAAGATTTCTGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAA
ACGTAACAGTACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGTATGGACGTTG
AGTATGGTCAGTACAGCGTTATTCTGTTGGTGGAGGGATTCCCGCCGTCACATGCCGGGACTATCACCGTGTATGAAGAT
TCTCAACCCGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAGGATGATGCCCGTCCGGAGGCACTGCGTCGCTTTGA
ACTGATGGTGGAAGAGGTGGTGCGTAACGCAGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACGTCAGCGAGGAATG
CCGGCATATCAGCCAGTCAGGCAGAAGAGAGCGCTGCAAATGCTGACACTTCAGCAGGGGATGCATCGGAGTCAGCCCGG
CAGGCGGCAGAAAGTGCAGCCTCAGCAAAGCAGTCAGAGGAGGCGTCCTCGTCCTCGGCCTCTGCGGCCGCTCAAAAAGC
CAGTGAGTCATTACAAAGTGCAACAGATGCTGAGTTGTCAAAAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGTCAGGG
ATGCAACGACCGCAACAGAAAAAGCCCGGGAGTCAACAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCGGCGGAA
GAGGCCGTAAACCGAATCCCCACCGTGGTGGGACCTCCCGGGCCAAAGGGGGAACCGGGGCCCGCGGGTCCTCAGGGGCC
GAAGGGAGACACAGGAGCCCCCGGGCAAGGAACAGAACTGCTTACTACTGCCAATACATGGACTCAGGCACAAACTTTTA
ATGGTGGTATTAATGGCAATTTGACGGTGACCGGAAACGGCTCATTTAACGATATTCAGATCCGTTCGGATAAACGCAAC
AAGCGAAATCTGGTAAAACTGGATAATGCGTTAGATCGTCTGGAGGCACTTACTGGTTATCTTTACGAGATACAGTACTC
TGCCGACGGTTGGCAAACGTCGGTTGGTTTAATTGCTCAGGATGCACAAAAAGCATTGCCTGAACTGGTAACTGAAGACG
CAGACGTTATATCTGGTGAAAAACGTCTGCGTCTTAACTACAACGGCATAATTGCATTGTTAGTCGAGGGCTTTAAAACA
CTTCGTCATGAGATTAAAGAACTCCGGGAGAAGTAA

Upstream 100 bases:

>100_bases
GACGGTTTCATCGTGGGTGTCGGCTATAAATTCTGATTAGCCAGGTAACACAGTGTCATGACAGCCCGCCGGTTCAGGCG
GGCTTTTTTGTGGGGTGAAT

Downstream 100 bases:

>100_bases
ACGACAGCTGTTGTAGTTTCTGGTTTCTACTGAATTTAAATTGTGGGGTGACACTCACCCCACGCATTCAGAAGGGGGAG
ATGAGATGGGGGTAACATCG

Product: side tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTATEKARESTESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRN
KRNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKT
LRHEIKELREK

Sequences:

>Translated_411_residues
MTVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTATEKARESTESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRN
KRNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKT
LRHEIKELREK
>Mature_410_residues
TVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDS
QPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQ
AAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTATEKARESTESAQSAEQSRIAAEE
AVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRNK
RNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKTL
RHEIKELREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=94.3089430894309, Blast_Score=252, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 43323; Mature: 43192

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEA
EEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAASAKQSEEASSSSA
HHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTATEKARESTESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC
LTVTGNGSFNDIQIRSDKRNKRNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQ
EEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHH
DAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKTLRHEIKELREK
HHHHHHHHHHCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSV
EEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEA
EEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAASAKQSEEASSSSA
HHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTATEKARESTESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC
LTVTGNGSFNDIQIRSDKRNKRNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQ
EEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHH
DAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKTLRHEIKELREK
HHHHHHHHHHCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]