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The map label for this gene is lomR [H]

Identifier: 187732821

GI number: 187732821

Start: 999085

End: 999339

Strand: Direct

Name: lomR [H]

Synonym: SbBS512_E1095

Alternate gene names: 187732821

Gene position: 999085-999339 (Clockwise)

Preceding gene: 187730571

Following gene: 187731452

Centisome position: 21.64

GC content: 56.47

Gene sequence:

>255_bases
ATGGCGGGTGTGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGGAAAACGCA
CGACGTGCTGACCGGAAGTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGGGCTGGCGTGCAGTTTAACCCGA
CCGAATCCGTGGCCATTGATATTGCTTATGAAGGTTCCGGTAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTC
GGCTATAAATTCTGA

Upstream 100 bases:

>100_bases
AAACGCACTACAGCGATACCCGCTGGCATGAAGATTCCGTTCGTAACCGCTGGTTCAGCGTAATGGCGGGGCCGTGAATG
AATGGTTCAGCGCGTATGCG

Downstream 100 bases:

>100_bases
TTAGCCAGGTAACACAGTGTCATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGACAGTAAAGATTT
CTGGTGTACTGAAAGACGGC

Product: putative Ail/Lom protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGV
GYKF

Sequences:

>Translated_84_residues
MAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGV
GYKF
>Mature_83_residues
AGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVG
YKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 8925; Mature: 8794

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAID
CCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCEEEE
IAYEGSGSGDWRTDGFIVGVGYKF
EEECCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
AGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAID
CCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCEEEE
IAYEGSGSGDWRTDGFIVGVGYKF
EEECCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]