| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731923
Identifier: 187731923
GI number: 187731923
Start: 1000725
End: 1001237
Strand: Direct
Name: 187731923
Synonym: SbBS512_E1097
Alternate gene names: NA
Gene position: 1000725-1001237 (Clockwise)
Preceding gene: 187731452
Following gene: 187730881
Centisome position: 21.68
GC content: 47.37
Gene sequence:
>513_bases ATGGGGGTAACATCGGGATGGGTAGGCTCTTCGGCTAAGAGCGAAACAGGTGAGCAGTGGATGGGAGCCGCCGGAACCAA ACTGGGACTGAGTAAACCTTTTATGATGAGCCAAATGGTTGGGCGAACTATGGGCTGTAAAATTGCAACTGAGTACTATA AATGGAAATCCTCTGACAAGGTTGATAACTGGGGCGCAGTTGGCGCTGACTGGCCTTTAGAAGAAAAAAGTAAAGGTACA ATTACAAACGCCGCAAGCTGCGGATCAGGGAGGCTGGTAGGGGCTGTCGTTACACTTTCTCACTTTTTGACGAACTCTAC ACCGACAGCTGCTGTTTATTTAGCCGGTGGTAAAGCAGGTAATATCACCGTAAACGTAGGTGGTGCTACACAAACCATGA TTTATCAGGGCGTTGTTAGTGGGTTCCAGTATTACTGGTCAGGTTCTGTTAGTTCCGCTTTCGTGGAGGCAATGAAAAAG ACGGGAGTACCCCAGGATCTAAAAATTAGTTAA
Upstream 100 bases:
>100_bases CTCCGGGAGAAGTAAACGACAGCTGTTGTAGTTTCTGGTTTCTACTGAATTTAAATTGTGGGGTGACACTCACCCCACGC ATTCAGAAGGGGGAGATGAG
Downstream 100 bases:
>100_bases ATGGTAAATAAATAATTTTAAAAACTTCACGTTCTACATACCGGAGACGCCGGATATATAGGATATTGTTTTAAGTTGCC AGAGAAATTTTTCCGGACGG
Product: putative receptor recognizing protein Gp38
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTMGCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGT ITNAASCGSGRLVGAVVTLSHFLTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK TGVPQDLKIS
Sequences:
>Translated_170_residues MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTMGCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGT ITNAASCGSGRLVGAVVTLSHFLTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK TGVPQDLKIS >Mature_169_residues GVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTMGCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTI TNAASCGSGRLVGAVVTLSHFLTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKKT GVPQDLKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17772; Mature: 17641
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTMGCKIATEYYKWKSSDK CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHCCCCCC VDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHFLTNSTPTAAVYLAGGKAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC NITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKKTGVPQDLKIS EEEEEECCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTMGCKIATEYYKWKSSDK CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHCCCCCC VDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHFLTNSTPTAAVYLAGGKAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC NITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKKTGVPQDLKIS EEEEEECCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA