Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is stfR [C]

Identifier: 187730611

GI number: 187730611

Start: 936922

End: 937980

Strand: Direct

Name: stfR [C]

Synonym: SbBS512_E1014

Alternate gene names: 187730611

Gene position: 936922-937980 (Clockwise)

Preceding gene: 187730104

Following gene: 187733702

Centisome position: 20.3

GC content: 52.22

Gene sequence:

>1059_bases
ATGTCTGTAGTGATATCAGGTGCGCTGACTGATGGCGCAGGCATCCCCATGTCCGGATGCCAGATTATTCTGAAATCCCG
TGTAAACACCTCAGAAGTGGTGATGCGTACCAGGGCTGATGTAGTGACCGGAAATAACGGTGAATATTCGTTTGAGGCAC
AGGTCGGAAAATATTGCGTGTATCTGAAACGGGACTGGCGCGACGAGTACTGTGTTGGCGACATTGCTGTATACGACGAC
TCAAAGCCCGGCACTCTGAAAACGGCTAACCATCTGTCTGAAATCGCAGCAGCAGGCGAAAAGGCACAACAGAAGTCCCG
GGATAATCTGGGGCTGAAAAGTGCGGCCACGATGGAAGCACAGAGCGACATTTACGACCGGACAAAAGGCCGTCTGGCGA
TACCCGGCGCATTCGGCTTTGGGTGTGCTTTTCTGCCTGAAGATGTTATCCGTTTTGACACTAAGAGTGATTTCCAGGCC
TGGGTAAGGAATGCGCTGCCAGGTGAATATTCCGTTGCTGGCCCCTACGACATCATCATACCCGACACACGGTTTGAAGG
GGTGCTCAGCATCCGGTGGACTGATGCACGCCCTGAGACAACAGAACCGCGGTACAGAGCCAAATCCCTTACTTTTTACG
GCATTAACGGCCCCATTTATCACACCCGCTACTGCTACTGGCCCATATCCAGACTGACTGACTGGGTGAAAATAAATATA
ACCACAGAAGATATTATTTACAGAATCGTGGCGAGCTCTGTCCGCAACAGATGGGGAGACCCTGACATTGGCGGGCTGAT
TATTGCTGCGTACCAGGGAGAAGCTGACGGTGATAAAGTCATCAGACTTGTCAGGGGGCAGTCATACAGAGGCTCACGAC
TGGGACCGGTGGGGATTTCAGTGCCCAGTACTCCCACCGGAACGTATATAGCATCCCCACAATTTTTCATTACGGGATGT
TCAGAGCATTCATTACCGGGGTCATATTGCGCCCTGTCCGGGGTGCCGGATGCTCATGTCTCTGGCGCAATGCCCGGGCT
TTTTATTCGCACATCGTGA

Upstream 100 bases:

>100_bases
TGGATTTCAGCGCCATCACTGATAAATCCTCATACAACGCCATTGAATGGCCCGTCTCTCCGGAAGGTTCTTCCTGATTT
AATTTATCGCGAGAAAAACT

Downstream 100 bases:

>100_bases
GGAATGCACCGTGGAAATTAAAAAAACCATTAATCCCCGTTATACCGAAAGTGGCGCAGTAGACTGTGACGTTTTTTTTG
ACGACAGGGACCAGGCAGTT

Product: putative prophage tail fiber protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Phage Tail Fibre Protein; Prophage Tail Fiber Protein

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDD
SKPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQA
WVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINI
TTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGC
SEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS

Sequences:

>Translated_352_residues
MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDD
SKPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQA
WVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINI
TTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGC
SEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
>Mature_351_residues
SVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDS
KPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQAW
VRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINIT
TEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCS
EHSLPGSYCALSGVPDAHVSGAMPGLFIRTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081892, Length=87, Percent_Identity=41.3793103448276, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38518; Mature: 38387

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCV
CEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCEEEEECCCCEEE
YLKRDWRDEYCVGDIAVYDDSKPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEA
EEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQAWVRNALPGEYSVAGPYDIII
HHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCCHHHHHHHHHCCCCCEECCCCEEEEE
PDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINI
CCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEHHHCCCEEEEEE
TTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGIS
EHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHEECCCCCCCCCCCCEEEE
VPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
CCCCCCCCEEECCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEC
>Mature Secondary Structure 
SVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCV
EEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCEEEEECCCCEEE
YLKRDWRDEYCVGDIAVYDDSKPGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEA
EEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFQAWVRNALPGEYSVAGPYDIII
HHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCCHHHHHHHHHCCCCCEECCCCEEEEE
PDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTDWVKINI
CCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEHHHCCCEEEEEE
TTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGIS
EHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHEECCCCCCCCCCCCEEEE
VPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
CCCCCCCCEEECCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA