| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733702
Identifier: 187733702
GI number: 187733702
Start: 937937
End: 938554
Strand: Direct
Name: 187733702
Synonym: SbBS512_E1015
Alternate gene names: NA
Gene position: 937937-938554 (Clockwise)
Preceding gene: 187730611
Following gene: 187731059
Centisome position: 20.32
GC content: 53.24
Gene sequence:
>618_bases ATGTCTCTGGCGCAATGCCCGGGCTTTTTATTCGCACATCGTGAGGAATGCACCGTGGAAATTAAAAAAACCATTAATCC CCGTTATACCGAAAGTGGCGCAGTAGACTGTGACGTTTTTTTTGACGACAGGGACCAGGCAGTTCCCTACACAGCCACCG CTGATGATGTCGCACCGACGGGTCAGCAAATCTGGCAGGAACTGCAAAGTGGCAAATGGGGTGAGATAGCCCCATTCACT GTGACACCAGAAATGCTGGAAGCGGCCAGAGAGGCCAGACGTCAGGAAATTGAAGCATGGCGCGCAGAACAGGAGGCGAA GCCGTTCACGTTTGAATGGAACGGTCGTATCTGGAATGCTGGTCCCGACTCACTGGGCCGCCTGTCCCCGGTAGTCATGC TGGCAAAATCTGTCACAGCACAAACACATATGGCGTGGAGCGATGCCGATAATCAGCAGGTGAAACTGTCGATGCCGGAA CTGGAAGAACTGGCGGCAGCAATGGTGCAGGCGCAGGTCGATCGCAACGATGAGATTTATCGCCGTCAGCGTGAAATGAA AGAGGAGCTGAGCGGTCTGGATGATTTGGCTTCAATTCGGGCGTTTGACGTTGAGTAA
Upstream 100 bases:
>100_bases ACCGGAACGTATATAGCATCCCCACAATTTTTCATTACGGGATGTTCAGAGCATTCATTACCGGGGTCATATTGCGCCCT GTCCGGGGTGCCGGATGCTC
Downstream 100 bases:
>100_bases TGAATAAGCCGCAACTGGCGGAATCACAGAAGACCGCTTTGCTTACCGAAGCGGAGTCTGTCATCCGGCCGCGGGGGCGT GCTGTCAGGCTGAACAGGGA
Product: putative tail component of prophage
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFT VTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPE LEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
Sequences:
>Translated_205_residues MSLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFT VTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPE LEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE >Mature_204_residues SLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTV TPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPEL EELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23229; Mature: 23098
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPT CCCCCCCCHHHCCCCHHEEEHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC GQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNA HHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECC GPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIY CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHH RRQREMKEELSGLDDLASIRAFDVE HHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure SLAQCPGFLFAHREECTVEIKKTINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPT CCCCCCCHHHCCCCHHEEEHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC GQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNA HHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECC GPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIY CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHH RRQREMKEELSGLDDLASIRAFDVE HHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA