Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is hisQ [H]
Identifier: 186476915
GI number: 186476915
Start: 2426230
End: 2426919
Strand: Direct
Name: hisQ [H]
Synonym: Bphy_2164
Alternate gene names: 186476915
Gene position: 2426230-2426919 (Clockwise)
Preceding gene: 186476914
Following gene: 186476916
Centisome position: 69.74
GC content: 60.87
Gene sequence:
>690_bases ATGCTCTTTCAAGGCTACGGCCCGATCATCTTTGCCGGCACGGTGCAGACCGTGAAGCTGGCTATCCTGTCGCTCGCGCT CGCATTCCTGCTCGGTCTGCTCGGCGCGGCAGCGAAGCTGTCGAAGAACCGGGTGACATACAGCGTCGGCACGATCTATA CGACGCTGATTCGCGGCGTCCCGGATCTCGTGCTGATGCTGCTGCTCTTCTACAGCATCCAGATCTGGCTGAACAATCTG ACCGACATGCTCGGCTGGGACCAGATCGACATCGATCCGTTCGTCGCCGGCGTCGCCGTGCTCGGCTTCATTTACGGCGC GTACTTCACCGAGACATTCCGCGGCGCATTCCTCGCCGTGCCGCGCGGCCAGCTCGAAGCGGGCGCCGCGTACGGCATGA CGGGCTGGCAGGTATTCTCGCGGATCATGTTTCCACAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAATAACTGGCAG GTGATGGTCAAAGCGACGGCGCTCGTGTCGATCATCGGTCTCGCGGACGTCGTCAAGGCGTCGCAGGACGCCGGCAAAGG CACGTTGCGTTTCTTCTTTTTCACGCTGATGGCAGGCGCCATCTATCTGCTCATCACGACGGCTTCGAACTTCGTGCTGA TGTACCTCGAAAAACGCTACTCGACTGGCGTGCGCAAGGCGGAACTATGA
Upstream 100 bases:
>100_bases GCACGGGAGACATCGAAGGCCATCGGTCTTCGCGCGAACCGCCGCAGCGTACGATTGCCGCGTCTTTCGCGGCGCGCGGA AGCGTCGTCAAGGACTCACT
Downstream 100 bases:
>100_bases TCGAGCTGATCCAGCAATACTGGCGCAACTATCTGTATACGGACGGTTACCGCTTCACGGGCGTCGCCATCACGCTGTGG CTGCTGGTGATTTCCATTGG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLFQGYGPIIFAGTVQTVKLAILSLALAFLLGLLGAAAKLSKNRVTYSVGTIYTTLIRGVPDLVLMLLLFYSIQIWLNNL TDMLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQ VMVKATALVSIIGLADVVKASQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRKAEL
Sequences:
>Translated_229_residues MLFQGYGPIIFAGTVQTVKLAILSLALAFLLGLLGAAAKLSKNRVTYSVGTIYTTLIRGVPDLVLMLLLFYSIQIWLNNL TDMLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQ VMVKATALVSIIGLADVVKASQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRKAEL >Mature_229_residues MLFQGYGPIIFAGTVQTVKLAILSLALAFLLGLLGAAAKLSKNRVTYSVGTIYTTLIRGVPDLVLMLLLFYSIQIWLNNL TDMLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQ VMVKATALVSIIGLADVVKASQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRKAEL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=61.7777777777778, Blast_Score=283, Evalue=6e-78, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=35.4260089686099, Blast_Score=133, Evalue=8e-33, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=30.188679245283, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788226, Length=221, Percent_Identity=28.5067873303167, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=29.3577981651376, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=27.3584905660377, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=30.3867403314917, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=27.7272727272727, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25089; Mature: 25089
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQGYGPIIFAGTVQTVKLAILSLALAFLLGLLGAAAKLSKNRVTYSVGTIYTTLIRGV CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCC PDLVLMLLLFYSIQIWLNNLTDMLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRKAEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLFQGYGPIIFAGTVQTVKLAILSLALAFLLGLLGAAAKLSKNRVTYSVGTIYTTLIRGV CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCC PDLVLMLLLFYSIQIWLNNLTDMLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRKAEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]