Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476735

Identifier: 186476735

GI number: 186476735

Start: 2231227

End: 2231742

Strand: Direct

Name: 186476735

Synonym: Bphy_1980

Alternate gene names: NA

Gene position: 2231227-2231742 (Clockwise)

Preceding gene: 186476732

Following gene: 186476736

Centisome position: 64.13

GC content: 66.47

Gene sequence:

>516_bases
ATGCCCGAAACCCCTGCCTCGCCTGAACAGAACGCGCCTGCTGCCATGCTCGCGGCCGTGCCCGCCGTCGTGCTTGATTC
GAACGTGTGGATCGACATTCTCGTGTTCGACGATCCCCACACGCGCCCCATTCTCGCCGCGCTCGAAAGCGGCGCACTGC
GCGCGCTGATCGACGCACGGTGTCTCGCCGAGCTGACGCATGTGCTCGATTATCCGCAGTTCGAGAAGCGCGCCGTCGAC
AAGGCCGCTGCGCTGGCGACGGTCGCGCGCCTCTCGACGTTCGTCCAGCCCGCGCCCGCCGAAGACGCGCGCCCGCTGCC
CAAATGCAAGGACCGCGACGATCAGAAGTTTCTCGAGCTCGCGCATGCGATGCAGGCGGACTGGCTGGTCTCGAAGGATC
GCGCGGTACTGAGGATGGCAAGGCGGATTGCGCGCGACTTCGGTTTCCGGATCGCACAGCCCGCGCCGTTCGTCGCCGAA
TGTGCGTTGACAGCCGAAGAAGCCGCGCAAGCCTGA

Upstream 100 bases:

>100_bases
TCTCGTAGTCGAGCGATTTGGCCGGCGACAGAACGATTATCATAGAGGCTTTCAGGCACGCCGTGCCTGGCGGTCAAAGA
CGAAAGCCAGATTGTAACGA

Downstream 100 bases:

>100_bases
CGCCCGCAAGACGCTACGCAATTCATACGCGCAGTCCCGCACACTCAACCGCCGCGCCCTTTTTCCCTACAATCGACATG
AACGCACCGCACGATCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVD
KAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAE
CALTAEEAAQA

Sequences:

>Translated_171_residues
MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVD
KAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAE
CALTAEEAAQA
>Mature_170_residues
PETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDARCLAELTHVLDYPQFEKRAVDK
AAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLELAHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAEC
ALTAEEAAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18637; Mature: 18505

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDAR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHH
CLAELTHVLDYPQFEKRAVDKAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLEL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
AHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAECALTAEEAAQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PETPASPEQNAPAAMLAAVPAVVLDSNVWIDILVFDDPHTRPILAALESGALRALIDAR
CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHH
CLAELTHVLDYPQFEKRAVDKAAALATVARLSTFVQPAPAEDARPLPKCKDRDDQKFLEL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
AHAMQADWLVSKDRAVLRMARRIARDFGFRIAQPAPFVAECALTAEEAAQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA