Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476705
Identifier: 186476705
GI number: 186476705
Start: 2194657
End: 2195055
Strand: Direct
Name: 186476705
Synonym: Bphy_1950
Alternate gene names: NA
Gene position: 2194657-2195055 (Clockwise)
Preceding gene: 186476704
Following gene: 186476706
Centisome position: 63.08
GC content: 59.9
Gene sequence:
>399_bases ATGGCAGACACGAAGGTCACCGCACACATCGGCTCGACGAATTTTCAGGTGCTGTTCGACGACGGAGCACATACGTGGCT CGCCGACGAACCCGAGTCGCTGGGTGGCGGCGATCGCGCCCCGACGCCGAATTCGCTCCTGTTGTCCAGTCTCGGCGCTT GCACCTCGATTACGCTGAAGATGTACGCTCAGCGCAAAGGGTGGCCGCTCGACGAAGTGCGCGTGACGCTGTCGATGCAG AAAGAAGGCGACGGCACGGCGATCGACCGTCAAATCGTTTTGACGGGCAATCTGTCGGACGAACAGCAGGAACGACTCCT GCAAATCGCCAATGCGTGTCCTGTGCACAAGATCCTGACCAATCCGATCTCGATTCGCACGGGCCTGGCTGTTGCTTGA
Upstream 100 bases:
>100_bases CGCGGCGAATTCGTTCACAATAGCGATTCGAGCCGCGCGGCGCGTTCTGCGCCGCGCGGCATCATCCGTTCCAATCCAAT GTCCCCGCACAGGAGCGCGC
Downstream 100 bases:
>100_bases ATCTGCGTGAATCATGAGCTTTAAGAGGAAGCTGCCGTCTTGAACTTCGAACACCTCATTCAGATCAACGATCCGCTCAA CCCGTTCGTCGAAACGATGA
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Hydrolase; Osmc Family Protein; OsmC-Like Family Protein; OsmC-Like Protein Superfamily Protein; Redox Protein Regulator Of Disulfide Bond Formation; OsmC-Like Protein/ Redox Protein; Hydroperoxide Resistance Protein OsmC-Like Protein; OsmC-Like Family; Osmotically Inducible Protein; Regulator Of Disulfide Bond Formation Redox Protein
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MADTKVTAHIGSTNFQVLFDDGAHTWLADEPESLGGGDRAPTPNSLLLSSLGACTSITLKMYAQRKGWPLDEVRVTLSMQ KEGDGTAIDRQIVLTGNLSDEQQERLLQIANACPVHKILTNPISIRTGLAVA
Sequences:
>Translated_132_residues MADTKVTAHIGSTNFQVLFDDGAHTWLADEPESLGGGDRAPTPNSLLLSSLGACTSITLKMYAQRKGWPLDEVRVTLSMQ KEGDGTAIDRQIVLTGNLSDEQQERLLQIANACPVHKILTNPISIRTGLAVA >Mature_131_residues ADTKVTAHIGSTNFQVLFDDGAHTWLADEPESLGGGDRAPTPNSLLLSSLGACTSITLKMYAQRKGWPLDEVRVTLSMQK EGDGTAIDRQIVLTGNLSDEQQERLLQIANACPVHKILTNPISIRTGLAVA
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14185; Mature: 14054
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTKVTAHIGSTNFQVLFDDGAHTWLADEPESLGGGDRAPTPNSLLLSSLGACTSITLK CCCCEEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH MYAQRKGWPLDEVRVTLSMQKEGDGTAIDRQIVLTGNLSDEQQERLLQIANACPVHKILT EECCCCCCCHHHEEEEEEEECCCCCCEECEEEEEECCCCCHHHHHHHHHHCCCCHHHHHC NPISIRTGLAVA CCCEECCCEECC >Mature Secondary Structure ADTKVTAHIGSTNFQVLFDDGAHTWLADEPESLGGGDRAPTPNSLLLSSLGACTSITLK CCCEEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH MYAQRKGWPLDEVRVTLSMQKEGDGTAIDRQIVLTGNLSDEQQERLLQIANACPVHKILT EECCCCCCCHHHEEEEEEEECCCCCCEECEEEEEECCCCCHHHHHHHHHHCCCCHHHHHC NPISIRTGLAVA CCCEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA