Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476706
Identifier: 186476706
GI number: 186476706
Start: 2195095
End: 2195586
Strand: Direct
Name: 186476706
Synonym: Bphy_1951
Alternate gene names: NA
Gene position: 2195095-2195586 (Clockwise)
Preceding gene: 186476705
Following gene: 186476707
Centisome position: 63.09
GC content: 58.94
Gene sequence:
>492_bases TTGAACTTCGAACACCTCATTCAGATCAACGATCCGCTCAACCCGTTCGTCGAAACGATGACGCGCGAACAGCTGTGGGA AGGCCTTGTGCTGCGCGCGGAGCAGCCGCAGTTGTTCGTGATGGGCCTCGACAGCTGCTCGATCCTGTCTCGTACGGAAA GCACGCTGGATCGCGAATTGCACTATGGTCACGCGACCGTGCGCGATCATGTCACGCTCACGCCGAAAGAAAGCGTGCGC TACGACATTCGCGCGACGGCCGACTACGTCGGCGGCTCGTTGACGATGACCATCGAGCAGCCCGACGAACTGCAGCTGTT TCTGCGCTTCGAGTACAAAACGAGCCTCCCTTCCGCTGACGAAAAGGGCGACCCCGATGCGCACCAGACGGAAGAGATTG TGAAATCGGCGTACCGCGAGTCGGATATCGATACCGTTCGCCTGATCCGCCAGTACGTCAGCGCGCGCAATACGCCTGAC CAGTTGCATTAA
Upstream 100 bases:
>100_bases TCCTGTGCACAAGATCCTGACCAATCCGATCTCGATTCGCACGGGCCTGGCTGTTGCTTGAATCTGCGTGAATCATGAGC TTTAAGAGGAAGCTGCCGTC
Downstream 100 bases:
>100_bases GTCCTGCGCTGCCTGACTCCTCGGGCGGCGTCACTTTCCTTGCCTATCGAAACGCCAATCCGATTGAATCCGCAATCTTG TAAATAGGAATGGTTATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNFEHLIQINDPLNPFVETMTREQLWEGLVLRAEQPQLFVMGLDSCSILSRTESTLDRELHYGHATVRDHVTLTPKESVR YDIRATADYVGGSLTMTIEQPDELQLFLRFEYKTSLPSADEKGDPDAHQTEEIVKSAYRESDIDTVRLIRQYVSARNTPD QLH
Sequences:
>Translated_163_residues MNFEHLIQINDPLNPFVETMTREQLWEGLVLRAEQPQLFVMGLDSCSILSRTESTLDRELHYGHATVRDHVTLTPKESVR YDIRATADYVGGSLTMTIEQPDELQLFLRFEYKTSLPSADEKGDPDAHQTEEIVKSAYRESDIDTVRLIRQYVSARNTPD QLH >Mature_163_residues MNFEHLIQINDPLNPFVETMTREQLWEGLVLRAEQPQLFVMGLDSCSILSRTESTLDRELHYGHATVRDHVTLTPKESVR YDIRATADYVGGSLTMTIEQPDELQLFLRFEYKTSLPSADEKGDPDAHQTEEIVKSAYRESDIDTVRLIRQYVSARNTPD QLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18794; Mature: 18794
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEHLIQINDPLNPFVETMTREQLWEGLVLRAEQPQLFVMGLDSCSILSRTESTLDREL CCCCEEEEECCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHH HYGHATVRDHVTLTPKESVRYDIRATADYVGGSLTMTIEQPDELQLFLRFEYKTSLPSAD HCCCCCCCCCEEECCHHHHEEEEEEHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCC EKGDPDAHQTEEIVKSAYRESDIDTVRLIRQYVSARNTPDQLH CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNFEHLIQINDPLNPFVETMTREQLWEGLVLRAEQPQLFVMGLDSCSILSRTESTLDREL CCCCEEEEECCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHH HYGHATVRDHVTLTPKESVRYDIRATADYVGGSLTMTIEQPDELQLFLRFEYKTSLPSAD HCCCCCCCCCEEECCHHHHEEEEEEHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCC EKGDPDAHQTEEIVKSAYRESDIDTVRLIRQYVSARNTPDQLH CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA