Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is yhhW [C]
Identifier: 186476704
GI number: 186476704
Start: 2193636
End: 2194508
Strand: Direct
Name: yhhW [C]
Synonym: Bphy_1949
Alternate gene names: 186476704
Gene position: 2193636-2194508 (Clockwise)
Preceding gene: 186476702
Following gene: 186476705
Centisome position: 63.05
GC content: 65.41
Gene sequence:
>873_bases ATGAGCGCGACCCGCACGATCGAACGCACGTATCCTTCCGTACGCACGGTTGAGGGCGGCGGTTTTGTCGTCCACCGCCC GTTCCCGACCCGCATGCTGATGGACTTCGACCCGTTTCTGCTGCTCGACGAAATGGGCCCGATCGACTACGCGCCCGGCG AGGCGAAAGGCGCGCCCGATCATCCGCACCGCGGCTTCGAAACGGTCACATACGTGCTCGAAGGCCAGTTCGGCCATCAA GATTCGGCGGGCCACTCGGGCACGCTGCGCGCCGGCGACGTCCAGTGGATGACGGCGGGCGCGGGCGTCGTGCACAGCGA AATGCCCGACCCATCGTTCGTCGCGACGGGCGGCCGCGTGCATGGACTGCAGTTGTGGGTGAACCTGCCTAAGCGCGACA AGATGATCGCGCCGCGCTATCAGGAAATGCCGTCTGCGGGCATCCCCGTCGCGACGTCCGACGACGGCAAGGTGCGAGTC AAGGTGATCGCGGGAGAAGCGCTTGGCGTGAAGGCCACGATCGAAACGCGCACGCCGATCCTGTACCAGCATTTCACGCT GCAGCCGGGCGCGCGGATCGTGCATCCCGTGCCGCGCGACTATCGCGTGTTCGCTTACGGATTGACAGGCAAAGGTTTTT ATAGCGACGAGCGGCTCGAAATCGGGCCGCAGCAGATGATCGTGTTTGACAACGACGGCGACACGGTGACGATCGCCGCC GGCGACGAGCCGCTCGATGTGCTGCTGTTCGGCGGCGTGCCGCTGAACGAGCCGGTCGTGCGCTACGGCCCGTTCGTGAT GAACACGGAAGACGAGATCCGTCAGGCGGTGGTCGACTATCAGGCGGGCCGCATGGGGCAGATCGCGCACTAG
Upstream 100 bases:
>100_bases AATCCATTGCGATAGACGGCCTGTCACGGCCAAAAGCGGTCCATATAATAGCCCTATGTTTCAGAAATAACGCTATTCCC CATTTTTCGAGGTGATTTTG
Downstream 100 bases:
>100_bases CGCTGCGCCGGGTTTCGCGAGCCGTCTGACGGCCGCTCAGCCGCGAATCGCGGCGAATTCGTTCACAATAGCGATTCGAG CCGCGCGGCGCGTTCTGCGC
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSATRTIERTYPSVRTVEGGGFVVHRPFPTRMLMDFDPFLLLDEMGPIDYAPGEAKGAPDHPHRGFETVTYVLEGQFGHQ DSAGHSGTLRAGDVQWMTAGAGVVHSEMPDPSFVATGGRVHGLQLWVNLPKRDKMIAPRYQEMPSAGIPVATSDDGKVRV KVIAGEALGVKATIETRTPILYQHFTLQPGARIVHPVPRDYRVFAYGLTGKGFYSDERLEIGPQQMIVFDNDGDTVTIAA GDEPLDVLLFGGVPLNEPVVRYGPFVMNTEDEIRQAVVDYQAGRMGQIAH
Sequences:
>Translated_290_residues MSATRTIERTYPSVRTVEGGGFVVHRPFPTRMLMDFDPFLLLDEMGPIDYAPGEAKGAPDHPHRGFETVTYVLEGQFGHQ DSAGHSGTLRAGDVQWMTAGAGVVHSEMPDPSFVATGGRVHGLQLWVNLPKRDKMIAPRYQEMPSAGIPVATSDDGKVRV KVIAGEALGVKATIETRTPILYQHFTLQPGARIVHPVPRDYRVFAYGLTGKGFYSDERLEIGPQQMIVFDNDGDTVTIAA GDEPLDVLLFGGVPLNEPVVRYGPFVMNTEDEIRQAVVDYQAGRMGQIAH >Mature_289_residues SATRTIERTYPSVRTVEGGGFVVHRPFPTRMLMDFDPFLLLDEMGPIDYAPGEAKGAPDHPHRGFETVTYVLEGQFGHQD SAGHSGTLRAGDVQWMTAGAGVVHSEMPDPSFVATGGRVHGLQLWVNLPKRDKMIAPRYQEMPSAGIPVATSDDGKVRVK VIAGEALGVKATIETRTPILYQHFTLQPGARIVHPVPRDYRVFAYGLTGKGFYSDERLEIGPQQMIVFDNDGDTVTIAAG DEPLDVLLFGGVPLNEPVVRYGPFVMNTEDEIRQAVVDYQAGRMGQIAH
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=290, Percent_Identity=42.4137931034483, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI4505823, Length=290, Percent_Identity=42.4137931034483, Blast_Score=225, Evalue=3e-59, Organism=Escherichia coli, GI1789847, Length=87, Percent_Identity=42.5287356321839, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31744; Mature: 31613
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATRTIERTYPSVRTVEGGGFVVHRPFPTRMLMDFDPFLLLDEMGPIDYAPGEAKGAPD CCCCCCHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYVLEGQFGHQDSAGHSGTLRAGDVQWMTAGAGVVHSEMPDPSFVATGGRV CCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCEEECCCCCCCEEECCCEE HGLQLWVNLPKRDKMIAPRYQEMPSAGIPVATSDDGKVRVKVIAGEALGVKATIETRTPI EEEEEEEECCCCCCCCCCHHHHCCCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCCCE LYQHFTLQPGARIVHPVPRDYRVFAYGLTGKGFYSDERLEIGPQQMIVFDNDGDTVTIAA EEEEEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCEEECCEEEEEEECCCCEEEEEE GDEPLDVLLFGGVPLNEPVVRYGPFVMNTEDEIRQAVVDYQAGRMGQIAH CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SATRTIERTYPSVRTVEGGGFVVHRPFPTRMLMDFDPFLLLDEMGPIDYAPGEAKGAPD CCCCCHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYVLEGQFGHQDSAGHSGTLRAGDVQWMTAGAGVVHSEMPDPSFVATGGRV CCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCEEECCCCCCCEEECCCEE HGLQLWVNLPKRDKMIAPRYQEMPSAGIPVATSDDGKVRVKVIAGEALGVKATIETRTPI EEEEEEEECCCCCCCCCCHHHHCCCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCCCE LYQHFTLQPGARIVHPVPRDYRVFAYGLTGKGFYSDERLEIGPQQMIVFDNDGDTVTIAA EEEEEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCEEECCEEEEEEECCCCEEEEEE GDEPLDVLLFGGVPLNEPVVRYGPFVMNTEDEIRQAVVDYQAGRMGQIAH CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]