Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is acrR [C]
Identifier: 186476023
GI number: 186476023
Start: 1414172
End: 1414792
Strand: Reverse
Name: acrR [C]
Synonym: Bphy_1264
Alternate gene names: 186476023
Gene position: 1414792-1414172 (Counterclockwise)
Preceding gene: 186476027
Following gene: 186476014
Centisome position: 40.66
GC content: 61.84
Gene sequence:
>621_bases ATGAAACGCATACGGCTCACCCGCGAACAGAGCAAGGACCAGACGCGTCTGCGTCTGCTCGATGCTGCGCAGGCCATTTT CATGAAGAAGGGGTTTGTCGCGGCGAGCGTCGAGGACATTGCCGAGGCGGCGGGCTATACGCGCGGCGCGTTCTATTCGA ACTTCCGAAGCAAGCCGGAACTGTTCCTGGAGCTGCTGCGGCGCGATCACGAGTCGATGCAGGCGGATCTGCAAGGCATC TTCGAAGAGAACGCGACGCGCGAGGAAATGGAAGCGAGCGTGCTGCGCTACTACAGCCGCATGCCGAGCGAGAACAAGTG CTTCATCCTGTGGGTGGAGGCGAAGCTGCTGGCCGCGCGCGATGCGCGGTTCCGCGTCCGTTTCAACGCCTTCATGCATG AAAAGCTCGAACAGCTCACGGCGTACATCACGGAGTTTTCAGTTCGGGTCGGCACGCCGCTGCCGTTGCCGGCCGAAACG CTGGCGCTCGGTCTGATGGGCCTGTGCGACGGCATGCAGTTTTTCTTTACCGTCGATCCGCAGCGCTTTTCGGGTCAGCG CGCGGAAGAAGTGCTCGGCAGCTTCTTTGCGCGGGTGGTGTTCGGCCGGTCGTTGGAGTGA
Upstream 100 bases:
>100_bases GCTGCACGGATTGCTTCAGATGGTGAAGCGAATTTTAATACAGTACTGTATCTGAATGCAAAGATGAATCTGATTTCGGA TCGATGCTAGACTGTTAAAT
Downstream 100 bases:
>100_bases CGCAAGCGTCCTTAAGCTCGCCGTTCAGATCCACACGTCGTTGGCGGCCGTGCGCTCGCTGGTTTCGCTGCCCGTGTTCG TCACGCCGCGCGGCTCGATC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator Tetr Family; Regulatory Protein; Transcription Regulator Protein; Regulatory Protein TetR; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKRIRLTREQSKDQTRLRLLDAAQAIFMKKGFVAASVEDIAEAAGYTRGAFYSNFRSKPELFLELLRRDHESMQADLQGI FEENATREEMEASVLRYYSRMPSENKCFILWVEAKLLAARDARFRVRFNAFMHEKLEQLTAYITEFSVRVGTPLPLPAET LALGLMGLCDGMQFFFTVDPQRFSGQRAEEVLGSFFARVVFGRSLE
Sequences:
>Translated_206_residues MKRIRLTREQSKDQTRLRLLDAAQAIFMKKGFVAASVEDIAEAAGYTRGAFYSNFRSKPELFLELLRRDHESMQADLQGI FEENATREEMEASVLRYYSRMPSENKCFILWVEAKLLAARDARFRVRFNAFMHEKLEQLTAYITEFSVRVGTPLPLPAET LALGLMGLCDGMQFFFTVDPQRFSGQRAEEVLGSFFARVVFGRSLE >Mature_206_residues MKRIRLTREQSKDQTRLRLLDAAQAIFMKKGFVAASVEDIAEAAGYTRGAFYSNFRSKPELFLELLRRDHESMQADLQGI FEENATREEMEASVLRYYSRMPSENKCFILWVEAKLLAARDARFRVRFNAFMHEKLEQLTAYITEFSVRVGTPLPLPAET LALGLMGLCDGMQFFFTVDPQRFSGQRAEEVLGSFFARVVFGRSLE
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23719; Mature: 23719
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIRLTREQSKDQTRLRLLDAAQAIFMKKGFVAASVEDIAEAAGYTRGAFYSNFRSKPE CCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHH LFLELLRRDHESMQADLQGIFEENATREEMEASVLRYYSRMPSENKCFILWVEAKLLAAR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHC DARFRVRFNAFMHEKLEQLTAYITEFSVRVGTPLPLPAETLALGLMGLCDGMQFFFTVDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECC QRFSGQRAEEVLGSFFARVVFGRSLE HHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRIRLTREQSKDQTRLRLLDAAQAIFMKKGFVAASVEDIAEAAGYTRGAFYSNFRSKPE CCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHH LFLELLRRDHESMQADLQGIFEENATREEMEASVLRYYSRMPSENKCFILWVEAKLLAAR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHC DARFRVRFNAFMHEKLEQLTAYITEFSVRVGTPLPLPAETLALGLMGLCDGMQFFFTVDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECC QRFSGQRAEEVLGSFFARVVFGRSLE HHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA