Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222654
Identifier: 183222654
GI number: 183222654
Start: 3422157
End: 3424781
Strand: Direct
Name: 183222654
Synonym: LEPBI_I3309
Alternate gene names: NA
Gene position: 3422157-3424781 (Clockwise)
Preceding gene: 183222653
Following gene: 183222656
Centisome position: 95.07
GC content: 37.33
Gene sequence:
>2625_bases ATGGGGAATTCTTATCGATCTTCCAGCTCGAGTTCAAGTAGTAGTAGTCGATCATCCTACTCAAGTTACAAACCTTCTGC CTCTAGTTCCTCCACATCAAAATCCTCTAGTGCAACAAGTTCTTATTCAACTCGTAGCGCTCCCGAGCCAACTTCCTATT TTGAATCAACAAACCATCAAATCTTGGTTCAGTTTTTTGCTGATGGGAGTGCTGAAGTAAAAGAAAACTTTCGTATCAAA AAAGACCAATCTAAAATCGGAATCAGAAGGTCTTCTTTCTTAATTCATAGAGAATCCGAGATCTCAGATTTGAGAGTTTC TCCAGATTCATTATTATCTTCGCATAACTCGGGTATCATTACGATTTTTTGGCCGAATAGTGATCCAAATCCAGAAATGG ACATCAGCCTAAATTACCGGATCCAAGAAGCTTATTTTCGTTTAGGTGGACTTTCTCTTATCAACTGGCGATTCTCGAAA ACAAGTCATTCTTCCACTCCATTTGTTTTGGATTTACAATGGGAACCAAATTCCTTCTCGAACGAATTCAGGATCCAAGA AGAAATTTTTAATTCTTCGTTCTCCGAATATGAAAGAAAGGACATTCCCGTTCCAACAAGCGAGAAACAATTCCAATACC ATCAGTCTGGCAATGTGGAAAGTAATGGGCTCGTGATCACTGATGTCCTGAATTGGGAGAAAGAAGCTAATCAAATCTCC AAAAACAATTCAAGTTCTGAATCACCGAATCACACATATACCTTACATCAAACAGTGACACTTAAAGACAATGGAGTTCA TTTTTACCAATCAAAGATCCAAATTTCAAAGGAGAATCCAAATCTTGACTCCTTACAGATTCAGCTGGGATTACAACAGT TTCGCGAATTTGGAGAATCTTTTTGGAATCAAATTTGGACACCAGCTTATCAGATTTCTTATGCATTTGAAGGAGTTTCC ACCTATTTTTGGCATTTGTTCAATGTAACCTTATCTGATGGCATAGACCAACCAAACAACCAACGCATTTATGAATTTGC ATTCAAAACAATGGGGGAAGTTTCCAATCGGATGGAACAAGGAATCGAACGATGGGTTCGCATCACAAGTTTGGAAAAAA GGGATCAGTTACTTTTGCAGAGATTTGCATTACGAGTGTTAAGCGAATCAAAAATGGATCCTTCCCAAACAAAAATGGAA ATCATTGTAAAAGATTGTGACTTTTGTTCAGATACTCTAGACAATTCCTCGTTAATCATACCAATACAACCCAAATGGGA AGAAGATGGATTTTTCTTGGAATGGAGCCATCCGATTCCACCAAACTATACGTTGTATCTAAGGATGACCGAAACAAACA AACACATTACCTACAATCCAATTCTCATCTATTATGCTGTATTGAGTGCATTCCTGCACTCACCAGGCTCAGGCAATCAT TTAGGGCATCTTACCGTGATTGGATTAATCTCCTTCTGTCTATTGGTCACTGGATTTATATCATTCAACCGAAAACAAAC AAAGAAATCTGAAAAACAGGTTTTCCAATCTATCTTATCCAAAATCCAAAACGAGGACCCAAGTTTTGATTTCAAACAAT TCAAAGAAAAGGTAATCTTTATCACAGAAACGACTGTTTCTGCTTGGGATAAGGGAAATATGGAACCTGCTCGAAATTTC ATTTCTGCGGCTGTTTTCCAAAGGTTTTCGATCCAATTACACTTAATGAATTCAATTGATGGTGAAGTCAATCGGATGAA AGATTTCCAAGTTGTATCTGTCCAAATCATTGGTTCAGAGATCGAATCAGAATATTTTACCTTACATTTAAAGTTAAAAT GTAAAACCAAAGACAAAACTTTTCCCAAACAGACTTCCGAATTGGAAATTCAAAACCAATTGAATCACGTATCTTCGATT ACCTATGAAGAAATTCACTCGTACACTCGAAAGTTAGGGACAAAAACCAAACCAAAAATTGACCTGATGCACAAACTTTG TCCAAGTTGTGGAGCCTCGCCAAAATTTTCTCATACAACCAATCGATGCGAATATTGCGGAGGAATTTTTAATTCAGGTG AAGCAGATTGGGTTCTAACGGAAATTACACAGACTGTTGAATGGGAATCAGTGAAGGATCCAAAAGTAAAGTCTTTACCA ATTGGAATTGCAAAACAATTGTTAGAAGATAGGGCTTCTTCAGTTTTTTGGAAATACCTCCATTTTTTATCCATTCCCAA TAGCCAAATTTTACACAGAGAATCTCTGGAAACATCATACGATCAATTAGGGAGACCAGGAAATGAACCAATGCATTCAC CTGTTGTCGGATCCTGTCATTTGATAGAGTATAAACATGATTCAAACCCACATCAAATGACATGCGAAATTCGTTGGAGT GTTGCTAGAAAAAAAGGATTGGTTCCAGAGCACCGCAGATCTCGCATTACTTTTGTTCTACCGTCGGAGAGGCCAAAATC TCTAGGATTTTCTGAAGTTTCGTGCAGTAACTGTGGTGCTCCCTTACCAGAAATTGATGCAAACAATTGTAGTTATTGTC AAAAACCAATTCCTGAAAAAGTATCAGATTGGTTATTTGCATCGATCAATAAAATATCTTTATAA
Upstream 100 bases:
>100_bases ATGGACAAAGTAAGAGTCGAAAAAAAATACCTTGCTTAAGATTGTTTTCATCCTATCCCTATTTGTTGTTTCGATCACTT CCATTGGTGCAAGGCCAGGG
Downstream 100 bases:
>100_bases GTTTTTTATCTGGGTTTTGTATAACAAATCCAATGCCTATCGGATATGATTTCCAAATTGAGTTTATGGCTCATCCGAAT CGTAACAATCATATCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 874; Mature: 873
Protein sequence:
>874_residues MGNSYRSSSSSSSSSSRSSYSSYKPSASSSSTSKSSSATSSYSTRSAPEPTSYFESTNHQILVQFFADGSAEVKENFRIK KDQSKIGIRRSSFLIHRESEISDLRVSPDSLLSSHNSGIITIFWPNSDPNPEMDISLNYRIQEAYFRLGGLSLINWRFSK TSHSSTPFVLDLQWEPNSFSNEFRIQEEIFNSSFSEYERKDIPVPTSEKQFQYHQSGNVESNGLVITDVLNWEKEANQIS KNNSSSESPNHTYTLHQTVTLKDNGVHFYQSKIQISKENPNLDSLQIQLGLQQFREFGESFWNQIWTPAYQISYAFEGVS TYFWHLFNVTLSDGIDQPNNQRIYEFAFKTMGEVSNRMEQGIERWVRITSLEKRDQLLLQRFALRVLSESKMDPSQTKME IIVKDCDFCSDTLDNSSLIIPIQPKWEEDGFFLEWSHPIPPNYTLYLRMTETNKHITYNPILIYYAVLSAFLHSPGSGNH LGHLTVIGLISFCLLVTGFISFNRKQTKKSEKQVFQSILSKIQNEDPSFDFKQFKEKVIFITETTVSAWDKGNMEPARNF ISAAVFQRFSIQLHLMNSIDGEVNRMKDFQVVSVQIIGSEIESEYFTLHLKLKCKTKDKTFPKQTSELEIQNQLNHVSSI TYEEIHSYTRKLGTKTKPKIDLMHKLCPSCGASPKFSHTTNRCEYCGGIFNSGEADWVLTEITQTVEWESVKDPKVKSLP IGIAKQLLEDRASSVFWKYLHFLSIPNSQILHRESLETSYDQLGRPGNEPMHSPVVGSCHLIEYKHDSNPHQMTCEIRWS VARKKGLVPEHRRSRITFVLPSERPKSLGFSEVSCSNCGAPLPEIDANNCSYCQKPIPEKVSDWLFASINKISL
Sequences:
>Translated_874_residues MGNSYRSSSSSSSSSSRSSYSSYKPSASSSSTSKSSSATSSYSTRSAPEPTSYFESTNHQILVQFFADGSAEVKENFRIK KDQSKIGIRRSSFLIHRESEISDLRVSPDSLLSSHNSGIITIFWPNSDPNPEMDISLNYRIQEAYFRLGGLSLINWRFSK TSHSSTPFVLDLQWEPNSFSNEFRIQEEIFNSSFSEYERKDIPVPTSEKQFQYHQSGNVESNGLVITDVLNWEKEANQIS KNNSSSESPNHTYTLHQTVTLKDNGVHFYQSKIQISKENPNLDSLQIQLGLQQFREFGESFWNQIWTPAYQISYAFEGVS TYFWHLFNVTLSDGIDQPNNQRIYEFAFKTMGEVSNRMEQGIERWVRITSLEKRDQLLLQRFALRVLSESKMDPSQTKME IIVKDCDFCSDTLDNSSLIIPIQPKWEEDGFFLEWSHPIPPNYTLYLRMTETNKHITYNPILIYYAVLSAFLHSPGSGNH LGHLTVIGLISFCLLVTGFISFNRKQTKKSEKQVFQSILSKIQNEDPSFDFKQFKEKVIFITETTVSAWDKGNMEPARNF ISAAVFQRFSIQLHLMNSIDGEVNRMKDFQVVSVQIIGSEIESEYFTLHLKLKCKTKDKTFPKQTSELEIQNQLNHVSSI TYEEIHSYTRKLGTKTKPKIDLMHKLCPSCGASPKFSHTTNRCEYCGGIFNSGEADWVLTEITQTVEWESVKDPKVKSLP IGIAKQLLEDRASSVFWKYLHFLSIPNSQILHRESLETSYDQLGRPGNEPMHSPVVGSCHLIEYKHDSNPHQMTCEIRWS VARKKGLVPEHRRSRITFVLPSERPKSLGFSEVSCSNCGAPLPEIDANNCSYCQKPIPEKVSDWLFASINKISL >Mature_873_residues GNSYRSSSSSSSSSSRSSYSSYKPSASSSSTSKSSSATSSYSTRSAPEPTSYFESTNHQILVQFFADGSAEVKENFRIKK DQSKIGIRRSSFLIHRESEISDLRVSPDSLLSSHNSGIITIFWPNSDPNPEMDISLNYRIQEAYFRLGGLSLINWRFSKT SHSSTPFVLDLQWEPNSFSNEFRIQEEIFNSSFSEYERKDIPVPTSEKQFQYHQSGNVESNGLVITDVLNWEKEANQISK NNSSSESPNHTYTLHQTVTLKDNGVHFYQSKIQISKENPNLDSLQIQLGLQQFREFGESFWNQIWTPAYQISYAFEGVST YFWHLFNVTLSDGIDQPNNQRIYEFAFKTMGEVSNRMEQGIERWVRITSLEKRDQLLLQRFALRVLSESKMDPSQTKMEI IVKDCDFCSDTLDNSSLIIPIQPKWEEDGFFLEWSHPIPPNYTLYLRMTETNKHITYNPILIYYAVLSAFLHSPGSGNHL GHLTVIGLISFCLLVTGFISFNRKQTKKSEKQVFQSILSKIQNEDPSFDFKQFKEKVIFITETTVSAWDKGNMEPARNFI SAAVFQRFSIQLHLMNSIDGEVNRMKDFQVVSVQIIGSEIESEYFTLHLKLKCKTKDKTFPKQTSELEIQNQLNHVSSIT YEEIHSYTRKLGTKTKPKIDLMHKLCPSCGASPKFSHTTNRCEYCGGIFNSGEADWVLTEITQTVEWESVKDPKVKSLPI GIAKQLLEDRASSVFWKYLHFLSIPNSQILHRESLETSYDQLGRPGNEPMHSPVVGSCHLIEYKHDSNPHQMTCEIRWSV ARKKGLVPEHRRSRITFVLPSERPKSLGFSEVSCSNCGAPLPEIDANNCSYCQKPIPEKVSDWLFASINKISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99993; Mature: 99862
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSYRSSSSSSSSSSRSSYSSYKPSASSSSTSKSSSATSSYSTRSAPEPTSYFESTNHQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCE ILVQFFADGSAEVKENFRIKKDQSKIGIRRSSFLIHRESEISDLRVSPDSLLSSHNSGII EEEEEECCCCHHHHHCCEEECCCHHHCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCEE TIFWPNSDPNPEMDISLNYRIQEAYFRLGGLSLINWRFSKTSHSSTPFVLDLQWEPNSFS EEECCCCCCCCCEEEEEEEEEHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCCC NEFRIQEEIFNSSFSEYERKDIPVPTSEKQFQYHQSGNVESNGLVITDVLNWEKEANQIS CCEEHHHHHHCCCHHHHHHCCCCCCCCHHHEEECCCCCCCCCCEEEEEECCCHHHHHHHH KNNSSSESPNHTYTLHQTVTLKDNGVHFYQSKIQISKENPNLDSLQIQLGLQQFREFGES CCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHH FWNQIWTPAYQISYAFEGVSTYFWHLFNVTLSDGIDQPNNQRIYEFAFKTMGEVSNRMEQ HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH GIERWVRITSLEKRDQLLLQRFALRVLSESKMDPSQTKMEIIVKDCDFCSDTLDNSSLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHCCCCCEEEE PIQPKWEEDGFFLEWSHPIPPNYTLYLRMTETNKHITYNPILIYYAVLSAFLHSPGSGNH EECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCC LGHLTVIGLISFCLLVTGFISFNRKQTKKSEKQVFQSILSKIQNEDPSFDFKQFKEKVIF CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEE ITETTVSAWDKGNMEPARNFISAAVFQRFSIQLHLMNSIDGEVNRMKDFQVVSVQIIGSE EEECCHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCEEEEEEEEECCH IESEYFTLHLKLKCKTKDKTFPKQTSELEIQNQLNHVSSITYEEIHSYTRKLGTKTKPKI HCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH DLMHKLCPSCGASPKFSHTTNRCEYCGGIFNSGEADWVLTEITQTVEWESVKDPKVKSLP HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCC IGIAKQLLEDRASSVFWKYLHFLSIPNSQILHRESLETSYDQLGRPGNEPMHSPVVGSCH HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE LIEYKHDSNPHQMTCEIRWSVARKKGLVPEHRRSRITFVLPSERPKSLGFSEVSCSNCGA EEEECCCCCCCEEEEEEEEEEHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCC PLPEIDANNCSYCQKPIPEKVSDWLFASINKISL CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GNSYRSSSSSSSSSSRSSYSSYKPSASSSSTSKSSSATSSYSTRSAPEPTSYFESTNHQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCE ILVQFFADGSAEVKENFRIKKDQSKIGIRRSSFLIHRESEISDLRVSPDSLLSSHNSGII EEEEEECCCCHHHHHCCEEECCCHHHCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCEE TIFWPNSDPNPEMDISLNYRIQEAYFRLGGLSLINWRFSKTSHSSTPFVLDLQWEPNSFS EEECCCCCCCCCEEEEEEEEEHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCCC NEFRIQEEIFNSSFSEYERKDIPVPTSEKQFQYHQSGNVESNGLVITDVLNWEKEANQIS CCEEHHHHHHCCCHHHHHHCCCCCCCCHHHEEECCCCCCCCCCEEEEEECCCHHHHHHHH KNNSSSESPNHTYTLHQTVTLKDNGVHFYQSKIQISKENPNLDSLQIQLGLQQFREFGES CCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHH FWNQIWTPAYQISYAFEGVSTYFWHLFNVTLSDGIDQPNNQRIYEFAFKTMGEVSNRMEQ HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH GIERWVRITSLEKRDQLLLQRFALRVLSESKMDPSQTKMEIIVKDCDFCSDTLDNSSLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHCCCCCEEEE PIQPKWEEDGFFLEWSHPIPPNYTLYLRMTETNKHITYNPILIYYAVLSAFLHSPGSGNH EECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCC LGHLTVIGLISFCLLVTGFISFNRKQTKKSEKQVFQSILSKIQNEDPSFDFKQFKEKVIF CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEE ITETTVSAWDKGNMEPARNFISAAVFQRFSIQLHLMNSIDGEVNRMKDFQVVSVQIIGSE EEECCHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCEEEEEEEEECCH IESEYFTLHLKLKCKTKDKTFPKQTSELEIQNQLNHVSSITYEEIHSYTRKLGTKTKPKI HCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH DLMHKLCPSCGASPKFSHTTNRCEYCGGIFNSGEADWVLTEITQTVEWESVKDPKVKSLP HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCC IGIAKQLLEDRASSVFWKYLHFLSIPNSQILHRESLETSYDQLGRPGNEPMHSPVVGSCH HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE LIEYKHDSNPHQMTCEIRWSVARKKGLVPEHRRSRITFVLPSERPKSLGFSEVSCSNCGA EEEECCCCCCCEEEEEEEEEEHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCC PLPEIDANNCSYCQKPIPEKVSDWLFASINKISL CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA