Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183222653

Identifier: 183222653

GI number: 183222653

Start: 3421574

End: 3422095

Strand: Direct

Name: 183222653

Synonym: LEPBI_I3308

Alternate gene names: NA

Gene position: 3421574-3422095 (Clockwise)

Preceding gene: 183222648

Following gene: 183222654

Centisome position: 95.05

GC content: 38.31

Gene sequence:

>522_bases
GTGAGAGAACCCATAAACTTCCTGTTTGTTATGGCTAAGAAAATCGTTCAAAATTTGAAACAAGTTAAGGGAAATAAAAA
GAGTCACCCGGATACCATTCACAAAACCCTCGATATCGAAAGTGACCTCCATATTGAATACGCAAAAGTCCTTTTGAGTT
TGTGGTCTTATGCATGTAATGCAGACGGGCAGTTCAAAAAAAAGGAAGGGGAAATTGTAGGAGAACTCGTCAATGTTCTA
TTTGAACCCGATTGTTTACTCAGTGGCTTTCAGGCCCAAAAAAAACAAGTCCTAGACATCCTTTCCAAAACTTTTGACAA
CCCACTACCGATGAAAACCATTTCCAAGGTTGTGGCAGACAGTGATGAGTATGCACTGAATTTTTTTGAAGATGCAGTTT
GTATTGTCGCCTCTGACGGTTCCTTAAACCAAGCTGAGATACAATTTTTAGAGGACTTAGCCAAAGAATTCAAAATTAGT
CCAATGGACAAAGTAAGAGTCGAAAAAAAATACCTTGCTTAA

Upstream 100 bases:

>100_bases
GTTTCGACATAGATTAATTCCAGTTTCCCAATGGGATTTTCCAATTCAGCCTATTTTTGAGAAAAATCAAGAAAAGAGAG
AAAAAATGAAGTTGAAGGAA

Downstream 100 bases:

>100_bases
GATTGTTTTCATCCTATCCCTATTTGTTGTTTCGATCACTTCCATTGGTGCAAGGCCAGGGATGGGGAATTCTTATCGAT
CTTCCAGCTCGAGTTCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MREPINFLFVMAKKIVQNLKQVKGNKKSHPDTIHKTLDIESDLHIEYAKVLLSLWSYACNADGQFKKKEGEIVGELVNVL
FEPDCLLSGFQAQKKQVLDILSKTFDNPLPMKTISKVVADSDEYALNFFEDAVCIVASDGSLNQAEIQFLEDLAKEFKIS
PMDKVRVEKKYLA

Sequences:

>Translated_173_residues
MREPINFLFVMAKKIVQNLKQVKGNKKSHPDTIHKTLDIESDLHIEYAKVLLSLWSYACNADGQFKKKEGEIVGELVNVL
FEPDCLLSGFQAQKKQVLDILSKTFDNPLPMKTISKVVADSDEYALNFFEDAVCIVASDGSLNQAEIQFLEDLAKEFKIS
PMDKVRVEKKYLA
>Mature_173_residues
MREPINFLFVMAKKIVQNLKQVKGNKKSHPDTIHKTLDIESDLHIEYAKVLLSLWSYACNADGQFKKKEGEIVGELVNVL
FEPDCLLSGFQAQKKQVLDILSKTFDNPLPMKTISKVVADSDEYALNFFEDAVCIVASDGSLNQAEIQFLEDLAKEFKIS
PMDKVRVEKKYLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19614; Mature: 19614

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPINFLFVMAKKIVQNLKQVKGNKKSHPDTIHKTLDIESDLHIEYAKVLLSLWSYACN
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
ADGQFKKKEGEIVGELVNVLFEPDCLLSGFQAQKKQVLDILSKTFDNPLPMKTISKVVAD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
SDEYALNFFEDAVCIVASDGSLNQAEIQFLEDLAKEFKISPMDKVRVEKKYLA
CHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MREPINFLFVMAKKIVQNLKQVKGNKKSHPDTIHKTLDIESDLHIEYAKVLLSLWSYACN
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
ADGQFKKKEGEIVGELVNVLFEPDCLLSGFQAQKKQVLDILSKTFDNPLPMKTISKVVAD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
SDEYALNFFEDAVCIVASDGSLNQAEIQFLEDLAKEFKISPMDKVRVEKKYLA
CHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA