Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222637
Identifier: 183222637
GI number: 183222637
Start: 3404592
End: 3405197
Strand: Direct
Name: 183222637
Synonym: LEPBI_I3292
Alternate gene names: NA
Gene position: 3404592-3405197 (Clockwise)
Preceding gene: 183222629
Following gene: 183222638
Centisome position: 94.58
GC content: 38.28
Gene sequence:
>606_bases GTGCAAAAGTTAGGAACACTACCCATTTCTCCCCTAGAAGCCATTGACCAATTAAAAACAGAAATGGACCAACCTGTCTG GGAAAATCGCCTCTTAGATTTGATGAAATTGGCCGCAAACAATGATAAAAATGTTTGGGCTATGATCTACCAGATCATAA GAGAAGCGGATTCGGGTCGTTTGTCTTGGGGGTATCACAAGGTTTTGCTTTCAGGAATGGTTTATTTACTCGCTTATGTG GGAGATTCCAAAAGTTACCGAGTCCTTGTGAATTATGTCAAATCGTTGGATCGTACGATTCCGATTGGTGCCATGGAATT GATCTCCGATTTACTACCGACTTTTGCAGAACTCGACATCCGAGAACTCTTCTCCATTGCCGCCAATACGGATGAACTCA AATCTGCATTTGGAGTTTTGGCATTATGCAAACTCAATATGGAAAATCGACTTTCCGATGAAGAAAAAACAAACTTAAAA TCCTTTTTATCAGATTATCAAAATTTGAAATATTATTTAAACGATACCATAGAGCTCACTTTAGAACAACTCAGTGAAAC TGATTCGAGTGATATGTTATCAGAACTTGATGGAATTATGTTATGA
Upstream 100 bases:
>100_bases ATCTATGCAACTAGTTTCGGTCGTACCTGGAAAACATTAGCATGATAAAAAAGAAAAGACATATACGTCTCATATTCTAG AATTATGTCGAGAGGAAACT
Downstream 100 bases:
>100_bases AAGCCGCCGTATTACCTTCGGGATCGAGATCCCTAGAAATCCAAGAATTAGACCTTCCACCACTCCCACCAAACCAAGTC AAGGTGAAAGTAAAAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQKLGTLPISPLEAIDQLKTEMDQPVWENRLLDLMKLAANNDKNVWAMIYQIIREADSGRLSWGYHKVLLSGMVYLLAYV GDSKSYRVLVNYVKSLDRTIPIGAMELISDLLPTFAELDIRELFSIAANTDELKSAFGVLALCKLNMENRLSDEEKTNLK SFLSDYQNLKYYLNDTIELTLEQLSETDSSDMLSELDGIML
Sequences:
>Translated_201_residues MQKLGTLPISPLEAIDQLKTEMDQPVWENRLLDLMKLAANNDKNVWAMIYQIIREADSGRLSWGYHKVLLSGMVYLLAYV GDSKSYRVLVNYVKSLDRTIPIGAMELISDLLPTFAELDIRELFSIAANTDELKSAFGVLALCKLNMENRLSDEEKTNLK SFLSDYQNLKYYLNDTIELTLEQLSETDSSDMLSELDGIML >Mature_201_residues MQKLGTLPISPLEAIDQLKTEMDQPVWENRLLDLMKLAANNDKNVWAMIYQIIREADSGRLSWGYHKVLLSGMVYLLAYV GDSKSYRVLVNYVKSLDRTIPIGAMELISDLLPTFAELDIRELFSIAANTDELKSAFGVLALCKLNMENRLSDEEKTNLK SFLSDYQNLKYYLNDTIELTLEQLSETDSSDMLSELDGIML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22885; Mature: 22885
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLGTLPISPLEAIDQLKTEMDQPVWENRLLDLMKLAANNDKNVWAMIYQIIREADSGR CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC LSWGYHKVLLSGMVYLLAYVGDSKSYRVLVNYVKSLDRTIPIGAMELISDLLPTFAELDI CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RELFSIAANTDELKSAFGVLALCKLNMENRLSDEEKTNLKSFLSDYQNLKYYLNDTIELT HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQLSETDSSDMLSELDGIML HHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MQKLGTLPISPLEAIDQLKTEMDQPVWENRLLDLMKLAANNDKNVWAMIYQIIREADSGR CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC LSWGYHKVLLSGMVYLLAYVGDSKSYRVLVNYVKSLDRTIPIGAMELISDLLPTFAELDI CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RELFSIAANTDELKSAFGVLALCKLNMENRLSDEEKTNLKSFLSDYQNLKYYLNDTIELT HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQLSETDSSDMLSELDGIML HHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA