Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222629
Identifier: 183222629
GI number: 183222629
Start: 3396130
End: 3397257
Strand: Direct
Name: 183222629
Synonym: LEPBI_I3284
Alternate gene names: NA
Gene position: 3396130-3397257 (Clockwise)
Preceding gene: 183222628
Following gene: 183222637
Centisome position: 94.35
GC content: 34.31
Gene sequence:
>1128_bases GTGAAGTTTTTTTTCATCGTATTTGTTTTGTTTATCTCTTTCAACAATTGCCAGACCAAACACGAATCCTTAGTTTCTGA AATTGAAGATCTTATATCAAAAGAAAAATATGAAAAAGCTTTGGTATTATTACAAGATCGATTATCAGCTATTCGCTCCA ATGCAGAAATCCTTTCTAAAAACAAACCCAACCAACCTAGACTTTTTGCTCTTTCTGAGGACCGAACAAAAATTGTTTGG ACGGAAAACAAAACACTCTATTTCAAAGATTTGGTAAACGATAATCGTAATTCAATTGAACTAAAACTTAGACCCGATTC AATCCAAATATCAGCTAACGGAAATTATGTTGCGATACAATATCCCTTAAAACAATACGGGGGTTGTGCACTCTTTGGGT ATTCCACCATGGATTCATCCTTAGAACACGAATCAATCGTTCACATCCCATGTAAAACGGGAATGGCAATTTCCAATTCT GGTGATTTGTTATTATACTTTTTTGAAAATCAACTCTTCATCGAAAAAACGGGAAAATCCTCTAAACCTGAAAAATTTCT CTCAAGTGATTTGTTTCCATCGCCTTATCCTAAATTAAAAATTCATTACCATATCTCTCCCATTGGAAATGAATATCTGG TATGGTCTGGAGTTGGAGGAGCCTACAATTTATTTTTTCTGAATATTGAATCGAAACGTGCATCCTTATTATCAAAAGAC ATCGTTCTTCCTAAATTCTATTATCATAACGGGAATTCTGGTTATGTTGTAGGTGGAAAAATTGGAGATTTGTACTTCAA AGAAGTTTTATACCACCAAGGAAAATCTCCATCAATCAATCGAGGAATTCCCATCGTCACAAGGGAAGCCTATTCATGGA AATTGACTGGAAAGGATGAATTCATCACCACAAATCAAAATGATCCTAACCAGCCGATGAAATGGAAAGTATCTGGCAAA AAAGAACATTTCCCATTTTTTATTGAAAGATTATGGGGAGTCGCTGGAGATAAAATTGTTTACGAAAGTAGAAAAGGTGA ACTGGTGTTAGATGATTTAACGTTTAGTGAAGAAGATTGGAAGGTTTACGAATATTTCAAAAAAGTGAGAAAAATGAACG ACGGTTAA
Upstream 100 bases:
>100_bases CTTTTGCTTACTATGATACCAAACGTGTGGGAAATACTGCGATGGAATTGTTTTCAAAAGAAATCCATTCGGATGAAATC CGAGAAATGTTGGAGTCTCA
Downstream 100 bases:
>100_bases GCCGCCTGTTCCTTCTCTTTTTTTACAGAAAACACTTCGCAAGCTTTGTACAAGTCTTGGACACAATGTGAAGTCAGTCG ATCCAAGTCTTCTGACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKFFFIVFVLFISFNNCQTKHESLVSEIEDLISKEKYEKALVLLQDRLSAIRSNAEILSKNKPNQPRLFALSEDRTKIVW TENKTLYFKDLVNDNRNSIELKLRPDSIQISANGNYVAIQYPLKQYGGCALFGYSTMDSSLEHESIVHIPCKTGMAISNS GDLLLYFFENQLFIEKTGKSSKPEKFLSSDLFPSPYPKLKIHYHISPIGNEYLVWSGVGGAYNLFFLNIESKRASLLSKD IVLPKFYYHNGNSGYVVGGKIGDLYFKEVLYHQGKSPSINRGIPIVTREAYSWKLTGKDEFITTNQNDPNQPMKWKVSGK KEHFPFFIERLWGVAGDKIVYESRKGELVLDDLTFSEEDWKVYEYFKKVRKMNDG
Sequences:
>Translated_375_residues MKFFFIVFVLFISFNNCQTKHESLVSEIEDLISKEKYEKALVLLQDRLSAIRSNAEILSKNKPNQPRLFALSEDRTKIVW TENKTLYFKDLVNDNRNSIELKLRPDSIQISANGNYVAIQYPLKQYGGCALFGYSTMDSSLEHESIVHIPCKTGMAISNS GDLLLYFFENQLFIEKTGKSSKPEKFLSSDLFPSPYPKLKIHYHISPIGNEYLVWSGVGGAYNLFFLNIESKRASLLSKD IVLPKFYYHNGNSGYVVGGKIGDLYFKEVLYHQGKSPSINRGIPIVTREAYSWKLTGKDEFITTNQNDPNQPMKWKVSGK KEHFPFFIERLWGVAGDKIVYESRKGELVLDDLTFSEEDWKVYEYFKKVRKMNDG >Mature_375_residues MKFFFIVFVLFISFNNCQTKHESLVSEIEDLISKEKYEKALVLLQDRLSAIRSNAEILSKNKPNQPRLFALSEDRTKIVW TENKTLYFKDLVNDNRNSIELKLRPDSIQISANGNYVAIQYPLKQYGGCALFGYSTMDSSLEHESIVHIPCKTGMAISNS GDLLLYFFENQLFIEKTGKSSKPEKFLSSDLFPSPYPKLKIHYHISPIGNEYLVWSGVGGAYNLFFLNIESKRASLLSKD IVLPKFYYHNGNSGYVVGGKIGDLYFKEVLYHQGKSPSINRGIPIVTREAYSWKLTGKDEFITTNQNDPNQPMKWKVSGK KEHFPFFIERLWGVAGDKIVYESRKGELVLDDLTFSEEDWKVYEYFKKVRKMNDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43219; Mature: 43219
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFFIVFVLFISFNNCQTKHESLVSEIEDLISKEKYEKALVLLQDRLSAIRSNAEILSK CHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC NKPNQPRLFALSEDRTKIVWTENKTLYFKDLVNDNRNSIELKLRPDSIQISANGNYVAIQ CCCCCCEEEEECCCCEEEEEECCCEEEEEEHHCCCCCEEEEEECCCEEEEEECCCEEEEE YPLKQYGGCALFGYSTMDSSLEHESIVHIPCKTGMAISNSGDLLLYFFENQLFIEKTGKS ECHHHCCCEEEEECHHCCCCCCCCCEEEEECCCCEEEECCCCEEEEEECCEEEEEECCCC SKPEKFLSSDLFPSPYPKLKIHYHISPIGNEYLVWSGVGGAYNLFFLNIESKRASLLSKD CCCHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEECHHHHHHHHHC IVLPKFYYHNGNSGYVVGGKIGDLYFKEVLYHQGKSPSINRGIPIVTREAYSWKLTGKDE CCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCCC FITTNQNDPNQPMKWKVSGKKEHFPFFIERLWGVAGDKIVYESRKGELVLDDLTFSEEDW EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCC KVYEYFKKVRKMNDG HHHHHHHHHHCCCCC >Mature Secondary Structure MKFFFIVFVLFISFNNCQTKHESLVSEIEDLISKEKYEKALVLLQDRLSAIRSNAEILSK CHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC NKPNQPRLFALSEDRTKIVWTENKTLYFKDLVNDNRNSIELKLRPDSIQISANGNYVAIQ CCCCCCEEEEECCCCEEEEEECCCEEEEEEHHCCCCCEEEEEECCCEEEEEECCCEEEEE YPLKQYGGCALFGYSTMDSSLEHESIVHIPCKTGMAISNSGDLLLYFFENQLFIEKTGKS ECHHHCCCEEEEECHHCCCCCCCCCEEEEECCCCEEEECCCCEEEEEECCEEEEEECCCC SKPEKFLSSDLFPSPYPKLKIHYHISPIGNEYLVWSGVGGAYNLFFLNIESKRASLLSKD CCCHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEECHHHHHHHHHC IVLPKFYYHNGNSGYVVGGKIGDLYFKEVLYHQGKSPSINRGIPIVTREAYSWKLTGKDE CCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCCC FITTNQNDPNQPMKWKVSGKKEHFPFFIERLWGVAGDKIVYESRKGELVLDDLTFSEEDW EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCC KVYEYFKKVRKMNDG HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA