Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222607
Identifier: 183222607
GI number: 183222607
Start: 3375809
End: 3376822
Strand: Direct
Name: 183222607
Synonym: LEPBI_I3262
Alternate gene names: NA
Gene position: 3375809-3376822 (Clockwise)
Preceding gene: 183222605
Following gene: 183222608
Centisome position: 93.78
GC content: 35.31
Gene sequence:
>1014_bases GTGGAAGACAAACAGAAATTCAATCCATCCCCCTTTGTCGAAATCCGAGACCCACAGCTCAGCGTACAAGAAATTGTCGA ATCTCTGGAAGCAAAGATCCCCTTGGACCCAAATCAAAACACACACTGGTCTGAACTCACAAAAATCAGCTATAAACCAG AATCCCCTCTTGGATTTCGCAAATTTGACCCAGCAGGTACTGCTCACTTATTTGAAAAAGGGATTTCGAGTCCGAAGTTT TCGAATCCCAAGTTTTGGTACATACGTGGTCCTGTTAAATACATCATCAATCGACTGATTTCCGTATACGGTCAGATTGA TAAAAAACTTTCAGAAAATCGAATTCGTGCATTTTTCTCCGTTCTTCATGAATTGGTTCGTTTGGGAAAACGATTGGAAC AAATGGAAAAACGATTTGATGGTTTTTATCGTGATCATTTGTTGAATACAAATCAAAAATCTTCGCCTAACTTTAGTTGG GCAACAAATTCATACTTTATCGATGCCGGTATCAATCCAAGTTGGAATCTGGCAGTTGAAGATCTAAAAGATTCAAGACA AGTTTTGGTTTTATTTCCTGAATGGGGAGAGATCTTAAAACAATTAACAATTTCTAAAATTCCCTTCCAGGCGATTACTT CTAACTCAGATCAACATGATTTTATTAAAAGAAAACTTTCGCATAACATACATTTACTAGAAAGTATTTTCCCTTTGTCT CAATTGAAAATACAGAATTTGGATATATTGGTTTATTTACCTTTAAACAAATTTCCTTCTTTTGCGATTGAAAGAATTTT TGGTGAAATCTCTGCCATTCTCACAAAAGGAAATCATATTTACTTTTCGGTCTCAATATTACCAGAAAACAACCATCGAC CGTTTCGAGATTTACAAGTGACAGAAATCAACTTAGATCTTTTGCCAAATTATTTAAACACTTTGGGATTCAATTCGTTA AGAGAACTAACTGTTTCTGAGGACACAAAGGTATTTCGATATACCAAATTCTAA
Upstream 100 bases:
>100_bases TGTTTTTTTTTCATAGAAAAGGGAATTTTCTGATCTGACCCTAAGATTTAGTTGCCATTCTTCCAATTTTTCAAATCCTC TCAACAAAAGAAAGAAAACT
Downstream 100 bases:
>100_bases GATGAATGTTTTCCAACATTTAGATGAATTAAAAGATTCTGATGGTGTAGGGAATGATGCTATCGGTTTAGCGGAAGTGT TCCAAAATTTGGGATACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MEDKQKFNPSPFVEIRDPQLSVQEIVESLEAKIPLDPNQNTHWSELTKISYKPESPLGFRKFDPAGTAHLFEKGISSPKF SNPKFWYIRGPVKYIINRLISVYGQIDKKLSENRIRAFFSVLHELVRLGKRLEQMEKRFDGFYRDHLLNTNQKSSPNFSW ATNSYFIDAGINPSWNLAVEDLKDSRQVLVLFPEWGEILKQLTISKIPFQAITSNSDQHDFIKRKLSHNIHLLESIFPLS QLKIQNLDILVYLPLNKFPSFAIERIFGEISAILTKGNHIYFSVSILPENNHRPFRDLQVTEINLDLLPNYLNTLGFNSL RELTVSEDTKVFRYTKF
Sequences:
>Translated_337_residues MEDKQKFNPSPFVEIRDPQLSVQEIVESLEAKIPLDPNQNTHWSELTKISYKPESPLGFRKFDPAGTAHLFEKGISSPKF SNPKFWYIRGPVKYIINRLISVYGQIDKKLSENRIRAFFSVLHELVRLGKRLEQMEKRFDGFYRDHLLNTNQKSSPNFSW ATNSYFIDAGINPSWNLAVEDLKDSRQVLVLFPEWGEILKQLTISKIPFQAITSNSDQHDFIKRKLSHNIHLLESIFPLS QLKIQNLDILVYLPLNKFPSFAIERIFGEISAILTKGNHIYFSVSILPENNHRPFRDLQVTEINLDLLPNYLNTLGFNSL RELTVSEDTKVFRYTKF >Mature_337_residues MEDKQKFNPSPFVEIRDPQLSVQEIVESLEAKIPLDPNQNTHWSELTKISYKPESPLGFRKFDPAGTAHLFEKGISSPKF SNPKFWYIRGPVKYIINRLISVYGQIDKKLSENRIRAFFSVLHELVRLGKRLEQMEKRFDGFYRDHLLNTNQKSSPNFSW ATNSYFIDAGINPSWNLAVEDLKDSRQVLVLFPEWGEILKQLTISKIPFQAITSNSDQHDFIKRKLSHNIHLLESIFPLS QLKIQNLDILVYLPLNKFPSFAIERIFGEISAILTKGNHIYFSVSILPENNHRPFRDLQVTEINLDLLPNYLNTLGFNSL RELTVSEDTKVFRYTKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39260; Mature: 39260
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKQKFNPSPFVEIRDPQLSVQEIVESLEAKIPLDPNQNTHWSELTKISYKPESPLGFR CCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCC KFDPAGTAHLFEKGISSPKFSNPKFWYIRGPVKYIINRLISVYGQIDKKLSENRIRAFFS CCCCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLHELVRLGKRLEQMEKRFDGFYRDHLLNTNQKSSPNFSWATNSYFIDAGINPSWNLAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCEEHH DLKDSRQVLVLFPEWGEILKQLTISKIPFQAITSNSDQHDFIKRKLSHNIHLLESIFPLS CCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCHH QLKIQNLDILVYLPLNKFPSFAIERIFGEISAILTKGNHIYFSVSILPENNHRPFRDLQV HEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEE TEINLDLLPNYLNTLGFNSLRELTVSEDTKVFRYTKF EEEEHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MEDKQKFNPSPFVEIRDPQLSVQEIVESLEAKIPLDPNQNTHWSELTKISYKPESPLGFR CCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCC KFDPAGTAHLFEKGISSPKFSNPKFWYIRGPVKYIINRLISVYGQIDKKLSENRIRAFFS CCCCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLHELVRLGKRLEQMEKRFDGFYRDHLLNTNQKSSPNFSWATNSYFIDAGINPSWNLAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCEEHH DLKDSRQVLVLFPEWGEILKQLTISKIPFQAITSNSDQHDFIKRKLSHNIHLLESIFPLS CCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCHH QLKIQNLDILVYLPLNKFPSFAIERIFGEISAILTKGNHIYFSVSILPENNHRPFRDLQV HEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEE TEINLDLLPNYLNTLGFNSLRELTVSEDTKVFRYTKF EEEEHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA