Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222608
Identifier: 183222608
GI number: 183222608
Start: 3376824
End: 3377894
Strand: Direct
Name: 183222608
Synonym: LEPBI_I3263
Alternate gene names: NA
Gene position: 3376824-3377894 (Clockwise)
Preceding gene: 183222607
Following gene: 183222609
Centisome position: 93.81
GC content: 34.55
Gene sequence:
>1071_bases ATGAATGTTTTCCAACATTTAGATGAATTAAAAGATTCTGATGGTGTAGGGAATGATGCTATCGGTTTAGCGGAAGTGTT CCAAAATTTGGGATACAACACTCACTTCATCACAAGATTACCTAGAAAAGGAAAACCACTAAACAGTGATTTTCATCTAG TACAATCATTTGATTTTCCAACTCACTCGAATGATATCCATATATTGCATTATGGAGGTTCCGGTTATCCTTACACACTT TTCCAAGAACTACCTGGAATCAAAATATTAAGGTTTCATAATGTCACACCGGCAAAGTTTTACGAACACACGACAACAGA AGATATTTACCATGCCATGGAAAAATTTGAATCTTTATCCTATTTAGAAATAGCAAGTTTGTCAATTTTCTGTGACTCTG TTTGGTGTGATTCTCAATTTAACTACGATACTCTCAGTAGATATCAGTTTCGAAATCCTTACATATTACCCATTTGCAAA CAATATGAAAAAATTCCAAAAAAACAGGAACTTGTGAAGAACAAGTTTTCAATTTCGTTTGTCGGAAGATTTTCACCTCA AAAAAAATGGGAAGATTTAATCACTTTTTTTTCAAATTGGGCCAAAGAATTTCCTGATGCCGAATGTTTCTGTGTTGGGT CCATCATTGGTGCATTCGATGGTTACTTTGATCGCTTAACAGAAAATGTACGAAAATACCATTTAGAAAATAAAGTTCAT TTTCTTATGGGTAAACCAGATTCAGAAGTTCTATCAATCCTAAATCAATCGAGTGCTTTTGTTTCGATGAGTGAACATGA AGGATTTTGTTTGCCAATCTTAGAAGCTTTTGGTGCAGGGATACCAGTGTTTGCATATGCACAAGGAGCGATCCCTGGAA CCATGCGAGAAGGTGGAAAACTATTTTTTTCGAAAGAAAATCAGTCTTTGATCCAAATCATGAAAGAAACCCTCCTTGAT AAAGAAAAATATCGAACAATGATTCAAACTCAATTCAATGTTTTGGGATATTATAATCAGTTTCCGTTTGCTGAGGCGAT ATCAGGCATATTAAGAAGTGGTATCAAATGA
Upstream 100 bases:
>100_bases GATCTTTTGCCAAATTATTTAAACACTTTGGGATTCAATTCGTTAAGAGAACTAACTGTTTCTGAGGACACAAAGGTATT TCGATATACCAAATTCTAAG
Downstream 100 bases:
>100_bases ACATTCACCAATTTTCTGCAGGATTCCAACTAGGTGATGCCATCTCACAAGAGATGTTGGAAATCAAAAGATTGTTAGCA AAGGAAGGTTATTCCGGTAA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Group 1 Family Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNVFQHLDELKDSDGVGNDAIGLAEVFQNLGYNTHFITRLPRKGKPLNSDFHLVQSFDFPTHSNDIHILHYGGSGYPYTL FQELPGIKILRFHNVTPAKFYEHTTTEDIYHAMEKFESLSYLEIASLSIFCDSVWCDSQFNYDTLSRYQFRNPYILPICK QYEKIPKKQELVKNKFSISFVGRFSPQKKWEDLITFFSNWAKEFPDAECFCVGSIIGAFDGYFDRLTENVRKYHLENKVH FLMGKPDSEVLSILNQSSAFVSMSEHEGFCLPILEAFGAGIPVFAYAQGAIPGTMREGGKLFFSKENQSLIQIMKETLLD KEKYRTMIQTQFNVLGYYNQFPFAEAISGILRSGIK
Sequences:
>Translated_356_residues MNVFQHLDELKDSDGVGNDAIGLAEVFQNLGYNTHFITRLPRKGKPLNSDFHLVQSFDFPTHSNDIHILHYGGSGYPYTL FQELPGIKILRFHNVTPAKFYEHTTTEDIYHAMEKFESLSYLEIASLSIFCDSVWCDSQFNYDTLSRYQFRNPYILPICK QYEKIPKKQELVKNKFSISFVGRFSPQKKWEDLITFFSNWAKEFPDAECFCVGSIIGAFDGYFDRLTENVRKYHLENKVH FLMGKPDSEVLSILNQSSAFVSMSEHEGFCLPILEAFGAGIPVFAYAQGAIPGTMREGGKLFFSKENQSLIQIMKETLLD KEKYRTMIQTQFNVLGYYNQFPFAEAISGILRSGIK >Mature_356_residues MNVFQHLDELKDSDGVGNDAIGLAEVFQNLGYNTHFITRLPRKGKPLNSDFHLVQSFDFPTHSNDIHILHYGGSGYPYTL FQELPGIKILRFHNVTPAKFYEHTTTEDIYHAMEKFESLSYLEIASLSIFCDSVWCDSQFNYDTLSRYQFRNPYILPICK QYEKIPKKQELVKNKFSISFVGRFSPQKKWEDLITFFSNWAKEFPDAECFCVGSIIGAFDGYFDRLTENVRKYHLENKVH FLMGKPDSEVLSILNQSSAFVSMSEHEGFCLPILEAFGAGIPVFAYAQGAIPGTMREGGKLFFSKENQSLIQIMKETLLD KEKYRTMIQTQFNVLGYYNQFPFAEAISGILRSGIK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40948; Mature: 40948
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFQHLDELKDSDGVGNDAIGLAEVFQNLGYNTHFITRLPRKGKPLNSDFHLVQSFDFP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHEEEECCCC THSNDIHILHYGGSGYPYTLFQELPGIKILRFHNVTPAKFYEHTTTEDIYHAMEKFESLS CCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCC YLEIASLSIFCDSVWCDSQFNYDTLSRYQFRNPYILPICKQYEKIPKKQELVKNKFSISF HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHCCCEEE VGRFSPQKKWEDLITFFSNWAKEFPDAECFCVGSIIGAFDGYFDRLTENVRKYHLENKVH EECCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FLMGKPDSEVLSILNQSSAFVSMSEHEGFCLPILEAFGAGIPVFAYAQGAIPGTMREGGK EEECCCHHHHHHHHCCCCCEEEECCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCCCCE LFFSKENQSLIQIMKETLLDKEKYRTMIQTQFNVLGYYNQFPFAEAISGILRSGIK EEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNVFQHLDELKDSDGVGNDAIGLAEVFQNLGYNTHFITRLPRKGKPLNSDFHLVQSFDFP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHEEEECCCC THSNDIHILHYGGSGYPYTLFQELPGIKILRFHNVTPAKFYEHTTTEDIYHAMEKFESLS CCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCC YLEIASLSIFCDSVWCDSQFNYDTLSRYQFRNPYILPICKQYEKIPKKQELVKNKFSISF HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHCCCEEE VGRFSPQKKWEDLITFFSNWAKEFPDAECFCVGSIIGAFDGYFDRLTENVRKYHLENKVH EECCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FLMGKPDSEVLSILNQSSAFVSMSEHEGFCLPILEAFGAGIPVFAYAQGAIPGTMREGGK EEECCCHHHHHHHHCCCCCEEEECCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCCCCE LFFSKENQSLIQIMKETLLDKEKYRTMIQTQFNVLGYYNQFPFAEAISGILRSGIK EEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA