| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221922
Identifier: 183221922
GI number: 183221922
Start: 2648673
End: 2649206
Strand: Reverse
Name: 183221922
Synonym: LEPBI_I2561
Alternate gene names: NA
Gene position: 2649206-2648673 (Counterclockwise)
Preceding gene: 183221923
Following gene: 183221920
Centisome position: 73.6
GC content: 35.39
Gene sequence:
>534_bases TTGGCTAATTCCATCGGTGATGAAAGAGCATTGGATGTATACCAAGAATTATTAACTTTTACAAATGCCATCACTGAAAC TTTGGATGTGCAAAAAATCGTATATTGGGATGAAATTCCAAGTATACCAAATCACTTTTTTAAAAATGGCTTCCTACATA GTCTTCAATCAAGGGGAGATCTGGGAGAAAAAATGGGGAAAGCATTTCAAAATGAACTCGATCCGAAACCATGTCAAACT CTCATCATCGGTACTGACTGTCCTTATCTCACGGTAGCAACATTTGAGAAGGCATACAAAGAATTAGAGAAATCAGATTT TGTCATCGGACCCGCAAAAGACGGCGGGTATTATTTACTTGGGATGAAAGAATTTTTTCCGAATGTTTTTTTAGAAATTC CTTGGAGTACGGAATCTGTTTTACCTTTGACCATAAAAAGGATACAAGATCAAAACCTTACCTTTACATTATTAGAAGAA TTAAATGACATTGACACGGTTGAAGATTGGAAGGAATGGAAACAAAATCATTAA
Upstream 100 bases:
>100_bases TTGTATTGGATTTTATCCTTAATTGGTTTTGGTATCTATGGAATTAAAGAAATTAATTATCTTCGCAAAACGGCCATTCC TTGGCAAAGTTAAAACACGA
Downstream 100 bases:
>100_bases TTCATTGGATGTAATTGGATCTCAACTCGCCGATTCAATGCTTCGTGTTCCTTTGTTTGGTTCGGAGATTTAGTATTTCC ATAGAACAAACGCCTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MANSIGDERALDVYQELLTFTNAITETLDVQKIVYWDEIPSIPNHFFKNGFLHSLQSRGDLGEKMGKAFQNELDPKPCQT LIIGTDCPYLTVATFEKAYKELEKSDFVIGPAKDGGYYLLGMKEFFPNVFLEIPWSTESVLPLTIKRIQDQNLTFTLLEE LNDIDTVEDWKEWKQNH
Sequences:
>Translated_177_residues MANSIGDERALDVYQELLTFTNAITETLDVQKIVYWDEIPSIPNHFFKNGFLHSLQSRGDLGEKMGKAFQNELDPKPCQT LIIGTDCPYLTVATFEKAYKELEKSDFVIGPAKDGGYYLLGMKEFFPNVFLEIPWSTESVLPLTIKRIQDQNLTFTLLEE LNDIDTVEDWKEWKQNH >Mature_176_residues ANSIGDERALDVYQELLTFTNAITETLDVQKIVYWDEIPSIPNHFFKNGFLHSLQSRGDLGEKMGKAFQNELDPKPCQTL IIGTDCPYLTVATFEKAYKELEKSDFVIGPAKDGGYYLLGMKEFFPNVFLEIPWSTESVLPLTIKRIQDQNLTFTLLEEL NDIDTVEDWKEWKQNH
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20401; Mature: 20270
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSIGDERALDVYQELLTFTNAITETLDVQKIVYWDEIPSIPNHFFKNGFLHSLQSRGD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LGEKMGKAFQNELDPKPCQTLIIGTDCPYLTVATFEKAYKELEKSDFVIGPAKDGGYYLL HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEE GMKEFFPNVFLEIPWSTESVLPLTIKRIQDQNLTFTLLEELNDIDTVEDWKEWKQNH EHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure ANSIGDERALDVYQELLTFTNAITETLDVQKIVYWDEIPSIPNHFFKNGFLHSLQSRGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LGEKMGKAFQNELDPKPCQTLIIGTDCPYLTVATFEKAYKELEKSDFVIGPAKDGGYYLL HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEE GMKEFFPNVFLEIPWSTESVLPLTIKRIQDQNLTFTLLEELNDIDTVEDWKEWKQNH EHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA