| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221923
Identifier: 183221923
GI number: 183221923
Start: 2649214
End: 2650485
Strand: Reverse
Name: 183221923
Synonym: LEPBI_I2562
Alternate gene names: NA
Gene position: 2650485-2649214 (Counterclockwise)
Preceding gene: 183221924
Following gene: 183221922
Centisome position: 73.63
GC content: 31.68
Gene sequence:
>1272_bases ATGTTCCTTTTTTTGATCTACCCATTACTTCTGTTTTTTGTTGCGAATGGAATCGATCGTAGCGATACCATTTCCATTCT TTCATCCACATTTTCACTTGGACTCTATTTCTTTTTTTTACAAACAAAATTGTATGTGTTTGAAAATCGGTTTTGGATGT TTTTATGTTATTCTGTAATCTTACGTTGTTTTGTTTTAGGTTCCCATCCAAACCTGAGTGATGATATTTATCGTTATCTT TTTGATGCGAAATTATTGTTCAATGGATTTTCTCCTTATGTGCAAACACCTTCCGCCTGGATTGTCGCAAACCAAATGCC TTTTGGGGATATGAAGGAATTACTTACAAATATGAACAGCCCAAATTATTTTTCCGTATATCCACTGTTACTTCTTTCGA TCTTTCTGATTGGTTTTGTATTAAATTCTCTCTTACAAACTCAGTTTTTAGGAATCCAAATTATTTTTTTGTTATTCGAT TTTTTGAATTTAAATTTGATTCGCAGATTTTATCCAAAGGAATCATTTCATTTTTATTGGATCTATTTTGCCAATCCACT TGTTATCATTGAAGGGGTATCTCAGATGCACCCTGAAATTTTGTTTGTGCCTTGGTTACTGGTTTTCGTTCAAACCAACC ATCTATGGATACGTGAGTTGGCGATGATCATTCTTACACAATTCAAGATCAACACTGTTTTATTTTTATTAGGTTTTTCA CACCAAAGAAAAAAAATATTGTATGGAGCATTCGGAATTCTATTATCGCTTGTTGTTTGGAAAATAACAGTTTTCAGCAA TTTAGAGTCGCAAGGGAGCCGGGGGATTGGTTTATTCTTTCATTCCTTTCGTTTTGCAGGGATTCTCGAACCTATTTTTT ATATAACTTTACATTCTTTCGGATATTCATATTTGTCTGGAATTTTATCGTTAAGTACTTTTGCATTTTTATTGATTAAT TTATTTTTGAATGAAAAGTTTTTGTCTCTTCCGATAGAAAGAAGATTGTTCCTTTTATACACTATCTTCCTTCTGTTTTC ACCTGTGATCCATTCTTGGTATTGGATTTTATTTGTAATTTTGGGAATGATTTGTCGTATCAATCCGATATTACAAACTT TAGTGATCATTCTTGCCTTTTTGTCTTATCTCATTTATGTTTCTGAGTTGTATTTTTATTTGTATTGGATTTTATCCTTA ATTGGTTTTGGTATCTATGGAATTAAAGAAATTAATTATCTTCGCAAAACGGCCATTCCTTGGCAAAGTTAA
Upstream 100 bases:
>100_bases AATATCAGGAACCTATTCCATGTCAGTCCGAGTAGGAATCAAAATTCTTTATACTTTTTTAAAATTACTTCTTTTCGGTA AATGAAATTTTAGAGAGAGA
Downstream 100 bases:
>100_bases AACACGATTGGCTAATTCCATCGGTGATGAAAGAGCATTGGATGTATACCAAGAATTATTAACTTTTACAAATGCCATCA CTGAAACTTTGGATGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MFLFLIYPLLLFFVANGIDRSDTISILSSTFSLGLYFFFLQTKLYVFENRFWMFLCYSVILRCFVLGSHPNLSDDIYRYL FDAKLLFNGFSPYVQTPSAWIVANQMPFGDMKELLTNMNSPNYFSVYPLLLLSIFLIGFVLNSLLQTQFLGIQIIFLLFD FLNLNLIRRFYPKESFHFYWIYFANPLVIIEGVSQMHPEILFVPWLLVFVQTNHLWIRELAMIILTQFKINTVLFLLGFS HQRKKILYGAFGILLSLVVWKITVFSNLESQGSRGIGLFFHSFRFAGILEPIFYITLHSFGYSYLSGILSLSTFAFLLIN LFLNEKFLSLPIERRLFLLYTIFLLFSPVIHSWYWILFVILGMICRINPILQTLVIILAFLSYLIYVSELYFYLYWILSL IGFGIYGIKEINYLRKTAIPWQS
Sequences:
>Translated_423_residues MFLFLIYPLLLFFVANGIDRSDTISILSSTFSLGLYFFFLQTKLYVFENRFWMFLCYSVILRCFVLGSHPNLSDDIYRYL FDAKLLFNGFSPYVQTPSAWIVANQMPFGDMKELLTNMNSPNYFSVYPLLLLSIFLIGFVLNSLLQTQFLGIQIIFLLFD FLNLNLIRRFYPKESFHFYWIYFANPLVIIEGVSQMHPEILFVPWLLVFVQTNHLWIRELAMIILTQFKINTVLFLLGFS HQRKKILYGAFGILLSLVVWKITVFSNLESQGSRGIGLFFHSFRFAGILEPIFYITLHSFGYSYLSGILSLSTFAFLLIN LFLNEKFLSLPIERRLFLLYTIFLLFSPVIHSWYWILFVILGMICRINPILQTLVIILAFLSYLIYVSELYFYLYWILSL IGFGIYGIKEINYLRKTAIPWQS >Mature_423_residues MFLFLIYPLLLFFVANGIDRSDTISILSSTFSLGLYFFFLQTKLYVFENRFWMFLCYSVILRCFVLGSHPNLSDDIYRYL FDAKLLFNGFSPYVQTPSAWIVANQMPFGDMKELLTNMNSPNYFSVYPLLLLSIFLIGFVLNSLLQTQFLGIQIIFLLFD FLNLNLIRRFYPKESFHFYWIYFANPLVIIEGVSQMHPEILFVPWLLVFVQTNHLWIRELAMIILTQFKINTVLFLLGFS HQRKKILYGAFGILLSLVVWKITVFSNLESQGSRGIGLFFHSFRFAGILEPIFYITLHSFGYSYLSGILSLSTFAFLLIN LFLNEKFLSLPIERRLFLLYTIFLLFSPVIHSWYWILFVILGMICRINPILQTLVIILAFLSYLIYVSELYFYLYWILSL IGFGIYGIKEINYLRKTAIPWQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49832; Mature: 49832
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFLIYPLLLFFVANGIDRSDTISILSSTFSLGLYFFFLQTKLYVFENRFWMFLCYSVI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LRCFVLGSHPNLSDDIYRYLFDAKLLFNGFSPYVQTPSAWIVANQMPFGDMKELLTNMNS HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCC PNYFSVYPLLLLSIFLIGFVLNSLLQTQFLGIQIIFLLFDFLNLNLIRRFYPKESFHFYW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE IYFANPLVIIEGVSQMHPEILFVPWLLVFVQTNHLWIRELAMIILTQFKINTVLFLLGFS EEECCCCCEEECHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HQRKKILYGAFGILLSLVVWKITVFSNLESQGSRGIGLFFHSFRFAGILEPIFYITLHSF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GYSYLSGILSLSTFAFLLINLFLNEKFLSLPIERRLFLLYTIFLLFSPVIHSWYWILFVI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGMICRINPILQTLVIILAFLSYLIYVSELYFYLYWILSLIGFGIYGIKEINYLRKTAIP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC WQS CCC >Mature Secondary Structure MFLFLIYPLLLFFVANGIDRSDTISILSSTFSLGLYFFFLQTKLYVFENRFWMFLCYSVI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LRCFVLGSHPNLSDDIYRYLFDAKLLFNGFSPYVQTPSAWIVANQMPFGDMKELLTNMNS HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCC PNYFSVYPLLLLSIFLIGFVLNSLLQTQFLGIQIIFLLFDFLNLNLIRRFYPKESFHFYW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE IYFANPLVIIEGVSQMHPEILFVPWLLVFVQTNHLWIRELAMIILTQFKINTVLFLLGFS EEECCCCCEEECHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HQRKKILYGAFGILLSLVVWKITVFSNLESQGSRGIGLFFHSFRFAGILEPIFYITLHSF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GYSYLSGILSLSTFAFLLINLFLNEKFLSLPIERRLFLLYTIFLLFSPVIHSWYWILFVI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGMICRINPILQTLVIILAFLSYLIYVSELYFYLYWILSLIGFGIYGIKEINYLRKTAIP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC WQS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA