| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ilvB2 [H]
Identifier: 183221733
GI number: 183221733
Start: 2431654
End: 2433381
Strand: Reverse
Name: ilvB2 [H]
Synonym: LEPBI_I2362
Alternate gene names: 183221733
Gene position: 2433381-2431654 (Counterclockwise)
Preceding gene: 183221735
Following gene: 183221732
Centisome position: 67.6
GC content: 44.73
Gene sequence:
>1728_bases ATGACAATAGGGGGGAAACGAATGACATCGACAACCGAAGCGATTACTGGCGGCCGGCTTATGGTCGAATTATTGGAAGA AGCGGGTGTGGAAATCGTCTTTGGATACCCAGGTGGAGCCATCCTCCCTTTCTACGACGAACTCTATCATAGCAAAAAAA TAAAACACATCCTTGTCCGCCATGAACAAGGTGCCATCCATATGGCAGAAGGGTATGCACGTTCCACAGGTAAGTTAGGT GTTTGTATTGCCACTTCGGGCCCAGGGGCAACGAATTTGATCACTGGCCTTACGGATGCCAAAATGGATTCTGTTCCCAT ACTTGCGATCACAGGCCAAGTCGCAACCGATGCCATAGGCACAGACGCCTTCCAAGAAGCCGATATCTTTGGGATCACAA TCCCCATCACAAAATACAATGCCCTTATCAAAAAAGCAGATGATCTTGCCCGTCATTTTGAAGAAGCCATCAAAATCGCC ATGGGAGGAAGACCAGGCCCAGTCCTCCTTGATTTTCCAAAAGATGTGCAACTGGGAAAAACAACAGTTCGAAAAGCGCA AAGCCTAAAAATTGCCCCTCACCATTATGAAAGACCAAAGGTGAAAGGGGACCCACAAGAATTTGCAGATGCTCTGAACG GAGCCAAACGCCCGTTACTTTATGTCGGTGGGGGAGCGATCAATTCCTTTGCCTCGGCCGAAATCAAAGCCCTTGCAGAA AAAGCAAATGCACCTGTTACCACAACACTTATGGGTCTTGGTGCCTTTCCTGGAACCCATCCCTTGTCTGTCGGAATGCT TGGGATGCACGGAACGGCTTATGCCAACAAAGCCGTGTTAGAATGTGATTATATCCTAAACTTAGGTGCTAGGTTTGATG ACCGCGTTGCCAAATACCAAGACTTTGCGCCAAGTGCTGTGCGGGCCCATATTGACATTGATGCCGCTGAGTTCAACAAA CGAATCAATGTAGATCATATCTTACATGGGGACTTAAAAGATGCCATTCGTGAAATCCTACCATTTGTGAAAAGTGGAGA TCGCAGTGAGTGGATTCAAAATATCCAATCACTCAAAAAAAATCATCCACTTGATTTCGATAACAGTGGTGACACAATCA AACCCCAAGATTTTTTACAAAAGGTATATGCAAAAACCAAGGGAGAGGCCATTGTATCAACCGACGTTGGCCAACACCAA ATGTGGGCAGCACAGTATTATCTCTTTGATAAACCAAACACTTGGCTTACGTCTGGTGGACTTGGTACGATGGGGTATGG ACTCCCTGCGGCCATTGGTGCCAAATTTGGAAACCCAGACAAAACTGTGATTTGTGTCACAGGAGATGGTTCTTTCCAAA TGTGTATCCAAGAACTAGCAACAATCGCTCAATCTAAGTTAGGTGTCAAAATTTTACTGTTTAATAATAACTTTCTTGGA ATGGTTCGCCAGTGGCAGGAACTCTTTTATGAAGAACGATTCAGTGAATCCCAATGGACTTATAATCCAAACTTTGTAAA ACTTGCCGAAGCCTATGACATCCCAGCGATGCGGATTGAAAAAAAGTCTGAAATCGAGAAGGGAGTGGAGTTTTTCTTAA AAGACAGCGGATCAGCCCTCATTGAAGTTATGATCCCTGCGGAAGAAAAAGTATTCCCTATGATCCCTGCCGGAAAATCA CAACAAGACCTCATAGAATTCAAAGACTTGGGGAAATTGAAAAAATGA
Upstream 100 bases:
>100_bases CATTTTCCATATAAGGTTCCATTTTTCAGCATTCCTTTTTAGACAGTAAAAATCGACTCAAAAACGTGAGAACATTGACA ACAGGCTCTTTTTTGCAGAA
Downstream 100 bases:
>100_bases AACATACACTCAGTATCTTAGTCAATAATCATCCAGGCGTGATGAGCCATGTCTCTGGACTTTTTACAAGACGTGGGTAT AACATTGATTCGATTGCTGT
Product: acetolactate synthase large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS; Vegetative protein 105; VEG105 [H]
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MTIGGKRMTSTTEAITGGRLMVELLEEAGVEIVFGYPGGAILPFYDELYHSKKIKHILVRHEQGAIHMAEGYARSTGKLG VCIATSGPGATNLITGLTDAKMDSVPILAITGQVATDAIGTDAFQEADIFGITIPITKYNALIKKADDLARHFEEAIKIA MGGRPGPVLLDFPKDVQLGKTTVRKAQSLKIAPHHYERPKVKGDPQEFADALNGAKRPLLYVGGGAINSFASAEIKALAE KANAPVTTTLMGLGAFPGTHPLSVGMLGMHGTAYANKAVLECDYILNLGARFDDRVAKYQDFAPSAVRAHIDIDAAEFNK RINVDHILHGDLKDAIREILPFVKSGDRSEWIQNIQSLKKNHPLDFDNSGDTIKPQDFLQKVYAKTKGEAIVSTDVGQHQ MWAAQYYLFDKPNTWLTSGGLGTMGYGLPAAIGAKFGNPDKTVICVTGDGSFQMCIQELATIAQSKLGVKILLFNNNFLG MVRQWQELFYEERFSESQWTYNPNFVKLAEAYDIPAMRIEKKSEIEKGVEFFLKDSGSALIEVMIPAEEKVFPMIPAGKS QQDLIEFKDLGKLKK
Sequences:
>Translated_575_residues MTIGGKRMTSTTEAITGGRLMVELLEEAGVEIVFGYPGGAILPFYDELYHSKKIKHILVRHEQGAIHMAEGYARSTGKLG VCIATSGPGATNLITGLTDAKMDSVPILAITGQVATDAIGTDAFQEADIFGITIPITKYNALIKKADDLARHFEEAIKIA MGGRPGPVLLDFPKDVQLGKTTVRKAQSLKIAPHHYERPKVKGDPQEFADALNGAKRPLLYVGGGAINSFASAEIKALAE KANAPVTTTLMGLGAFPGTHPLSVGMLGMHGTAYANKAVLECDYILNLGARFDDRVAKYQDFAPSAVRAHIDIDAAEFNK RINVDHILHGDLKDAIREILPFVKSGDRSEWIQNIQSLKKNHPLDFDNSGDTIKPQDFLQKVYAKTKGEAIVSTDVGQHQ MWAAQYYLFDKPNTWLTSGGLGTMGYGLPAAIGAKFGNPDKTVICVTGDGSFQMCIQELATIAQSKLGVKILLFNNNFLG MVRQWQELFYEERFSESQWTYNPNFVKLAEAYDIPAMRIEKKSEIEKGVEFFLKDSGSALIEVMIPAEEKVFPMIPAGKS QQDLIEFKDLGKLKK >Mature_574_residues TIGGKRMTSTTEAITGGRLMVELLEEAGVEIVFGYPGGAILPFYDELYHSKKIKHILVRHEQGAIHMAEGYARSTGKLGV CIATSGPGATNLITGLTDAKMDSVPILAITGQVATDAIGTDAFQEADIFGITIPITKYNALIKKADDLARHFEEAIKIAM GGRPGPVLLDFPKDVQLGKTTVRKAQSLKIAPHHYERPKVKGDPQEFADALNGAKRPLLYVGGGAINSFASAEIKALAEK ANAPVTTTLMGLGAFPGTHPLSVGMLGMHGTAYANKAVLECDYILNLGARFDDRVAKYQDFAPSAVRAHIDIDAAEFNKR INVDHILHGDLKDAIREILPFVKSGDRSEWIQNIQSLKKNHPLDFDNSGDTIKPQDFLQKVYAKTKGEAIVSTDVGQHQM WAAQYYLFDKPNTWLTSGGLGTMGYGLPAAIGAKFGNPDKTVICVTGDGSFQMCIQELATIAQSKLGVKILLFNNNFLGM VRQWQELFYEERFSESQWTYNPNFVKLAEAYDIPAMRIEKKSEIEKGVEFFLKDSGSALIEVMIPAEEKVFPMIPAGKSQ QDLIEFKDLGKLKK
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=573, Percent_Identity=25.130890052356, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI21361361, Length=505, Percent_Identity=24.950495049505, Blast_Score=135, Evalue=8e-32, Organism=Escherichia coli, GI1790104, Length=561, Percent_Identity=45.632798573975, Blast_Score=511, Evalue=1e-146, Organism=Escherichia coli, GI87081685, Length=555, Percent_Identity=43.2432432432432, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI1786717, Length=582, Percent_Identity=32.6460481099656, Blast_Score=289, Evalue=3e-79, Organism=Escherichia coli, GI1787096, Length=544, Percent_Identity=29.0441176470588, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1788716, Length=500, Percent_Identity=27, Blast_Score=129, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17542570, Length=510, Percent_Identity=27.0588235294118, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17531299, Length=569, Percent_Identity=25.1318101933216, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17531301, Length=569, Percent_Identity=25.1318101933216, Blast_Score=125, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323755, Length=587, Percent_Identity=43.2708688245315, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320816, Length=493, Percent_Identity=23.9350912778905, Blast_Score=94, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6323163, Length=563, Percent_Identity=24.6891651865009, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321524, Length=491, Percent_Identity=23.8289205702648, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323073, Length=581, Percent_Identity=21.6867469879518, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922626, Length=483, Percent_Identity=27.536231884058, Blast_Score=160, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62888; Mature: 62757
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGGKRMTSTTEAITGGRLMVELLEEAGVEIVFGYPGGAILPFYDELYHSKKIKHILVR CCCCCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEE HEQGAIHMAEGYARSTGKLGVCIATSGPGATNLITGLTDAKMDSVPILAITGQVATDAIG CCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHCC TDAFQEADIFGITIPITKYNALIKKADDLARHFEEAIKIAMGGRPGPVLLDFPKDVQLGK CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCH TTVRKAQSLKIAPHHYERPKVKGDPQEFADALNGAKRPLLYVGGGAINSFASAEIKALAE HHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH KANAPVTTTLMGLGAFPGTHPLSVGMLGMHGTAYANKAVLECDYILNLGARFDDRVAKYQ HCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCHHCCCEEEEEHHHHHCCCCCHHHHHHHH DFAPSAVRAHIDIDAAEFNKRINVDHILHGDLKDAIREILPFVKSGDRSEWIQNIQSLKK CCCCCCEEEEEECCHHHHCCCCCHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NHPLDFDNSGDTIKPQDFLQKVYAKTKGEAIVSTDVGQHQMWAAQYYLFDKPNTWLTSGG CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHEEEEEEEEEECCCCEEECCC LGTMGYGLPAAIGAKFGNPDKTVICVTGDGSFQMCIQELATIAQSKLGVKILLFNNNFLG CCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHH MVRQWQELFYEERFSESQWTYNPNFVKLAEAYDIPAMRIEKKSEIEKGVEFFLKDSGSAL HHHHHHHHHHHHHCCCCCCEECCCEEEEEHHCCCCCCEECCHHHHHHHHHHHHCCCCCEE IEVMIPAEEKVFPMIPAGKSQQDLIEFKDLGKLKK EEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TIGGKRMTSTTEAITGGRLMVELLEEAGVEIVFGYPGGAILPFYDELYHSKKIKHILVR CCCCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEE HEQGAIHMAEGYARSTGKLGVCIATSGPGATNLITGLTDAKMDSVPILAITGQVATDAIG CCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHCC TDAFQEADIFGITIPITKYNALIKKADDLARHFEEAIKIAMGGRPGPVLLDFPKDVQLGK CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCH TTVRKAQSLKIAPHHYERPKVKGDPQEFADALNGAKRPLLYVGGGAINSFASAEIKALAE HHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH KANAPVTTTLMGLGAFPGTHPLSVGMLGMHGTAYANKAVLECDYILNLGARFDDRVAKYQ HCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCHHCCCEEEEEHHHHHCCCCCHHHHHHHH DFAPSAVRAHIDIDAAEFNKRINVDHILHGDLKDAIREILPFVKSGDRSEWIQNIQSLKK CCCCCCEEEEEECCHHHHCCCCCHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NHPLDFDNSGDTIKPQDFLQKVYAKTKGEAIVSTDVGQHQMWAAQYYLFDKPNTWLTSGG CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHEEEEEEEEEECCCCEEECCC LGTMGYGLPAAIGAKFGNPDKTVICVTGDGSFQMCIQELATIAQSKLGVKILLFNNNFLG CCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHH MVRQWQELFYEERFSESQWTYNPNFVKLAEAYDIPAMRIEKKSEIEKGVEFFLKDSGSAL HHHHHHHHHHHHHCCCCCCEECCCEEEEEHHCCCCCCEECCHHHHHHHHHHHHCCCCCEE IEVMIPAEEKVFPMIPAGKSQQDLIEFKDLGKLKK EEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377; 1577690; 9298659 [H]