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The map label for this gene is garP [C]

Identifier: 183221735

GI number: 183221735

Start: 2434815

End: 2435993

Strand: Reverse

Name: garP [C]

Synonym: LEPBI_I2364

Alternate gene names: 183221735

Gene position: 2435993-2434815 (Counterclockwise)

Preceding gene: 183221736

Following gene: 183221733

Centisome position: 67.67

GC content: 37.32

Gene sequence:

>1179_bases
ATGAAAACAATTTCTAAAACCGTTTTGATCCTTTCCCTTGTCAGTCTATTTACAGATATCGCAAGTGAGATGTTATATCC
GATTCTTCCGATTTACCTTCGGTCGATTGAGTATTCGGTAATATTCATTGGATTTTTGGAAGGAATTGCCGAGTTGATTG
CAGGCTATAGTAAGGGATATTTTGGTAATCTATCTGATTTGCATGGGAGGAGGGTTCCTTTTGTGCGACTTGGTTACTTT
CTTAGTTCGATCTCCAAACCTTTGTTAGTAATGAGTCAATTGCCAGGGATTGTACTTTTTGCTCGCACATTAGATCGGAT
GGGTAAAGGTGTTCGCACTGGTGCAAGGGATGCCCTTTTATCAGAAGAAGCAACATCTACTACAAAAGCGCAAATTTTTG
GATTTCACCGTTCCTTTGATACCTTAGGCGCTGTTTTGGGTCCAAGTATCGCACTCGTCTTTTTGGTAGTCTACCCCAAC
CATTATGTTTTATTATTTTATCTGGCAGTTGTACCAGGATTAATTTCCGTTGGTCTCACTTTTCTATTGAAAGAAACGAT
AACAAAAGAGAAAAAACTCACGAATTCACTAACATTGTTTTCCTACCTTTCCTATTGGAAGGAATCCAATCCCAATTATC
GGAAGTTAGTGTTTGGTCTCATCGTTTTTGCATTTTGGAATAGCTCTGATGTGTTTTTGATTTTAAAAGCCAAAGAGGTT
GGACTCGGTGACAGTTATGTCATTGGTATTTATATCTTTTATAATTTGGTGTATGCAATCTTTGCGTATCCATTAGGAAT
TTTGGCAGACAAGGTTGGTTTTAAAAAGATGTTTTTATTTGGGTTATTCCTTTTTGTTTTGGTTTATTTCCTTATGGGAT
TTGCACAAAAACTTGAATGGGTGGTCATAGCCTTTTTTTTATACGGGATCTATGCAAGTGCAACAGAAGGGATCTCAAAA
GCTTGGATTAGTAACCTTGTCCCGAAAGAGGAAGTGGGAACTGCGATTGGATTTTTCTCTGGGTTACAAAGTGTTTCCCT
GTTTTTTGCAAGTCTGATTGCAGGTTGGATTTGGTTTTTGTTTGGAGCCCCTGTTACCTTTTTTGTAACAGGAGTGATCG
CACTTCTAGTGTTGATTTATTTCTTCTTTTCAAAAATCGAAGAAAAAAATTTGAATTAA

Upstream 100 bases:

>100_bases
CAAAAAGATGTTGTCCCACTAAACCATTGTTCTGCCCATTAGAAAGAGTGGTATTTTTACCCCCACCTAAGATCAGTTTG
GACTATGGTCTCTCGATCCA

Downstream 100 bases:

>100_bases
TTGTTTAAACGATGTTTGTTTAAGTCATCGTTTTGAAAGAGGAATTTGTTCTAGATGCGACTATCTAAATTAAAACGAGA
AATGAAATTGCTAAAATGAA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKTISKTVLILSLVSLFTDIASEMLYPILPIYLRSIEYSVIFIGFLEGIAELIAGYSKGYFGNLSDLHGRRVPFVRLGYF
LSSISKPLLVMSQLPGIVLFARTLDRMGKGVRTGARDALLSEEATSTTKAQIFGFHRSFDTLGAVLGPSIALVFLVVYPN
HYVLLFYLAVVPGLISVGLTFLLKETITKEKKLTNSLTLFSYLSYWKESNPNYRKLVFGLIVFAFWNSSDVFLILKAKEV
GLGDSYVIGIYIFYNLVYAIFAYPLGILADKVGFKKMFLFGLFLFVLVYFLMGFAQKLEWVVIAFFLYGIYASATEGISK
AWISNLVPKEEVGTAIGFFSGLQSVSLFFASLIAGWIWFLFGAPVTFFVTGVIALLVLIYFFFSKIEEKNLN

Sequences:

>Translated_392_residues
MKTISKTVLILSLVSLFTDIASEMLYPILPIYLRSIEYSVIFIGFLEGIAELIAGYSKGYFGNLSDLHGRRVPFVRLGYF
LSSISKPLLVMSQLPGIVLFARTLDRMGKGVRTGARDALLSEEATSTTKAQIFGFHRSFDTLGAVLGPSIALVFLVVYPN
HYVLLFYLAVVPGLISVGLTFLLKETITKEKKLTNSLTLFSYLSYWKESNPNYRKLVFGLIVFAFWNSSDVFLILKAKEV
GLGDSYVIGIYIFYNLVYAIFAYPLGILADKVGFKKMFLFGLFLFVLVYFLMGFAQKLEWVVIAFFLYGIYASATEGISK
AWISNLVPKEEVGTAIGFFSGLQSVSLFFASLIAGWIWFLFGAPVTFFVTGVIALLVLIYFFFSKIEEKNLN
>Mature_392_residues
MKTISKTVLILSLVSLFTDIASEMLYPILPIYLRSIEYSVIFIGFLEGIAELIAGYSKGYFGNLSDLHGRRVPFVRLGYF
LSSISKPLLVMSQLPGIVLFARTLDRMGKGVRTGARDALLSEEATSTTKAQIFGFHRSFDTLGAVLGPSIALVFLVVYPN
HYVLLFYLAVVPGLISVGLTFLLKETITKEKKLTNSLTLFSYLSYWKESNPNYRKLVFGLIVFAFWNSSDVFLILKAKEV
GLGDSYVIGIYIFYNLVYAIFAYPLGILADKVGFKKMFLFGLFLFVLVYFLMGFAQKLEWVVIAFFLYGIYASATEGISK
AWISNLVPKEEVGTAIGFFSGLQSVSLFFASLIAGWIWFLFGAPVTFFVTGVIALLVLIYFFFSKIEEKNLN

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43897; Mature: 43897

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]