| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mviN [H]
Identifier: 183221666
GI number: 183221666
Start: 2360321
End: 2361949
Strand: Reverse
Name: mviN [H]
Synonym: LEPBI_I2291
Alternate gene names: 183221666
Gene position: 2361949-2360321 (Counterclockwise)
Preceding gene: 183221667
Following gene: 183221662
Centisome position: 65.62
GC content: 39.29
Gene sequence:
>1629_bases ATGACAAACCAAGATCGAGGGAATGGGTCGAGTACGAAACGGTCCCTTGCTTTATCCTTCTATACCTTTTTATCTAGAAT TTTAGGCCTCATTCGTGACCATTTTATGGCTGTTAGTTTTGGAACAGGAATGGTTGCCTCAGCATTTAGTGTTGCTTACC GACTTCCCAATATGTTTCGCAATTTACTTGCGGAAGGAACCTTAAGCCAATCCTTTATGCCGATTTTTTCGGAATATGAG AAGATGGGTGTAATGGAAGCTCGAGTGATGTCGGGAACCGTCTTAAGTTTTCTTTTTCTCTGTTTGTCTGTATTCGTTGC TATTTTTTGGTTTTTTGTCGCTCAGTTTTTACCAACTCTAGTTGGTGGAACTCCTGAATATGGAAACTTGGTCGTAGAAC TTTCATTAGTTTTGTTTTTTCTCATCATGACGGCAAGTTTGTCTTCGATTTTTATGTCGATCTCAAACTCCCATCACAAA TATTTTGTTCCTTCTTTGTCTCCCATTATCCTTAACTTTAGTTATTTGATTGTATTTATATTTGTTTTCCCTTTTTATCA TGAAATCAAAGAACGAGTTTTTTTACTCGCGTATGGAATCGTTTCAGGTGGGGTATTACAACTCCTTGTGCAAGGTTGGT ATGTTTACCGAAATGGTTTTGGTCCTATCTTTCGGTTGGATTTCAAACACCCTGCGATCAAAAAGATTTTTAAACTCATG TTACCTGCAGCCCTTGGTGGGAGTTTTTATCAAATAGGACTTCTTGTAGATATCTTTCTTGCAAACTACATCCAAAATCA AAATCCAGGGCTTGGTGCGGTTGTGAGTCTGGATTATGCACAAAGATTGGTCCAACTTCCGACTGGGATCATTGGAGTGG CACTTGCTACAACAATTCTCCCTTCCCTTCTAAAAGATTTGCGCGAAGGAAGAGAAGAAAATATTCCGAAAGAAATTGCT GATGTATTGTCATTTGCATTCTTTTTGACATTACCTGCAAGCATTGGTTTGGCGGTACTTGGAGAAACAGTTCTCGATTC CATTTATTATGGGGGAAGGTGGGACCATTTAGCAACCCTCACTGCCTTTTTTCCACTTGTATTTTACTCATTGGCCATTC CTTTTTATAGCATCAATAAGGTATTGGTTTCTTCTTATTATGCCTTTTCCGATACGAAAACTCCACTTCGTATCCAATTG ATTTCTTTTCTTTTGAGTGTGATGGTTAGCATCGGACTTATGGTGTTTCTCAAACATTCTGCGATCGCCCTCGCATCTGC ACTCAGTGCCGTTGTCACATCTTCTTTGTTATTATTTTATTTAAAAGCACACCAAGTGACAATTCCTTTTGCCACCGTTG GGAAACGTGTGTTGAAGATGGTGCCAGCACTCTTTGGACTTTTCTTTTGGCTTGTATTCTCTGAATGGGTAGTGAAGCCA AACTTACACAGTATTGGAGTAAGTTCCCTTGGTCTTGGTTATGCCAATCTCAGTCGATTGAGTCTTGTTCTTTCCATCGT ACCGGCGATCATTTTATACTTTGGAATTGCAACCTACACTGGGCTTTCTGAATCCGAGATCATTCTTGGTAGGTTTTTAA GAAAATGGAAACAAAAGTCTAAATCCTAA
Upstream 100 bases:
>100_bases GAAAACATGAATGTCCCAATTGTAAAACTCAGTTCCAATTGAGTCCAAATGGTTCCATCCGTTTTCTTGAAAAATTAAAT CCAATCTAAATCCTGGTTTT
Downstream 100 bases:
>100_bases ATATAAAACTTAGGCAATGATCCTTGAGTGAAGTAAAAGAGTCTCTGCTTCTCTCTCAGTTCCATTGCCCATTTTGTTAT CTTTTGATCCAACCTTACCC
Product: putative virulence factor MviN-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTNQDRGNGSSTKRSLALSFYTFLSRILGLIRDHFMAVSFGTGMVASAFSVAYRLPNMFRNLLAEGTLSQSFMPIFSEYE KMGVMEARVMSGTVLSFLFLCLSVFVAIFWFFVAQFLPTLVGGTPEYGNLVVELSLVLFFLIMTASLSSIFMSISNSHHK YFVPSLSPIILNFSYLIVFIFVFPFYHEIKERVFLLAYGIVSGGVLQLLVQGWYVYRNGFGPIFRLDFKHPAIKKIFKLM LPAALGGSFYQIGLLVDIFLANYIQNQNPGLGAVVSLDYAQRLVQLPTGIIGVALATTILPSLLKDLREGREENIPKEIA DVLSFAFFLTLPASIGLAVLGETVLDSIYYGGRWDHLATLTAFFPLVFYSLAIPFYSINKVLVSSYYAFSDTKTPLRIQL ISFLLSVMVSIGLMVFLKHSAIALASALSAVVTSSLLLFYLKAHQVTIPFATVGKRVLKMVPALFGLFFWLVFSEWVVKP NLHSIGVSSLGLGYANLSRLSLVLSIVPAIILYFGIATYTGLSESEIILGRFLRKWKQKSKS
Sequences:
>Translated_542_residues MTNQDRGNGSSTKRSLALSFYTFLSRILGLIRDHFMAVSFGTGMVASAFSVAYRLPNMFRNLLAEGTLSQSFMPIFSEYE KMGVMEARVMSGTVLSFLFLCLSVFVAIFWFFVAQFLPTLVGGTPEYGNLVVELSLVLFFLIMTASLSSIFMSISNSHHK YFVPSLSPIILNFSYLIVFIFVFPFYHEIKERVFLLAYGIVSGGVLQLLVQGWYVYRNGFGPIFRLDFKHPAIKKIFKLM LPAALGGSFYQIGLLVDIFLANYIQNQNPGLGAVVSLDYAQRLVQLPTGIIGVALATTILPSLLKDLREGREENIPKEIA DVLSFAFFLTLPASIGLAVLGETVLDSIYYGGRWDHLATLTAFFPLVFYSLAIPFYSINKVLVSSYYAFSDTKTPLRIQL ISFLLSVMVSIGLMVFLKHSAIALASALSAVVTSSLLLFYLKAHQVTIPFATVGKRVLKMVPALFGLFFWLVFSEWVVKP NLHSIGVSSLGLGYANLSRLSLVLSIVPAIILYFGIATYTGLSESEIILGRFLRKWKQKSKS >Mature_541_residues TNQDRGNGSSTKRSLALSFYTFLSRILGLIRDHFMAVSFGTGMVASAFSVAYRLPNMFRNLLAEGTLSQSFMPIFSEYEK MGVMEARVMSGTVLSFLFLCLSVFVAIFWFFVAQFLPTLVGGTPEYGNLVVELSLVLFFLIMTASLSSIFMSISNSHHKY FVPSLSPIILNFSYLIVFIFVFPFYHEIKERVFLLAYGIVSGGVLQLLVQGWYVYRNGFGPIFRLDFKHPAIKKIFKLML PAALGGSFYQIGLLVDIFLANYIQNQNPGLGAVVSLDYAQRLVQLPTGIIGVALATTILPSLLKDLREGREENIPKEIAD VLSFAFFLTLPASIGLAVLGETVLDSIYYGGRWDHLATLTAFFPLVFYSLAIPFYSINKVLVSSYYAFSDTKTPLRIQLI SFLLSVMVSIGLMVFLKHSAIALASALSAVVTSSLLLFYLKAHQVTIPFATVGKRVLKMVPALFGLFFWLVFSEWVVKPN LHSIGVSSLGLGYANLSRLSLVLSIVPAIILYFGIATYTGLSESEIILGRFLRKWKQKSKS
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=438, Percent_Identity=31.2785388127854, Blast_Score=208, Evalue=7e-55,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 60226; Mature: 60095
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQDRGNGSSTKRSLALSFYTFLSRILGLIRDHFMAVSFGTGMVASAFSVAYRLPNMFR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NLLAEGTLSQSFMPIFSEYEKMGVMEARVMSGTVLSFLFLCLSVFVAIFWFFVAQFLPTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGTPEYGNLVVELSLVLFFLIMTASLSSIFMSISNSHHKYFVPSLSPIILNFSYLIVFI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH FVFPFYHEIKERVFLLAYGIVSGGVLQLLVQGWYVYRNGFGPIFRLDFKHPAIKKIFKLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH LPAALGGSFYQIGLLVDIFLANYIQNQNPGLGAVVSLDYAQRLVQLPTGIIGVALATTIL HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHH PSLLKDLREGREENIPKEIADVLSFAFFLTLPASIGLAVLGETVLDSIYYGGRWDHLATL HHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TAFFPLVFYSLAIPFYSINKVLVSSYYAFSDTKTPLRIQLISFLLSVMVSIGLMVFLKHS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIALASALSAVVTSSLLLFYLKAHQVTIPFATVGKRVLKMVPALFGLFFWLVFSEWVVKP HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLHSIGVSSLGLGYANLSRLSLVLSIVPAIILYFGIATYTGLSESEIILGRFLRKWKQKS CCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC KS CC >Mature Secondary Structure TNQDRGNGSSTKRSLALSFYTFLSRILGLIRDHFMAVSFGTGMVASAFSVAYRLPNMFR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NLLAEGTLSQSFMPIFSEYEKMGVMEARVMSGTVLSFLFLCLSVFVAIFWFFVAQFLPTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGTPEYGNLVVELSLVLFFLIMTASLSSIFMSISNSHHKYFVPSLSPIILNFSYLIVFI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH FVFPFYHEIKERVFLLAYGIVSGGVLQLLVQGWYVYRNGFGPIFRLDFKHPAIKKIFKLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH LPAALGGSFYQIGLLVDIFLANYIQNQNPGLGAVVSLDYAQRLVQLPTGIIGVALATTIL HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHH PSLLKDLREGREENIPKEIADVLSFAFFLTLPASIGLAVLGETVLDSIYYGGRWDHLATL HHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TAFFPLVFYSLAIPFYSINKVLVSSYYAFSDTKTPLRIQLISFLLSVMVSIGLMVFLKHS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIALASALSAVVTSSLLLFYLKAHQVTIPFATVGKRVLKMVPALFGLFFWLVFSEWVVKP HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLHSIGVSSLGLGYANLSRLSLVLSIVPAIILYFGIATYTGLSESEIILGRFLRKWKQKS CCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]