| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221667
Identifier: 183221667
GI number: 183221667
Start: 2361961
End: 2362830
Strand: Reverse
Name: 183221667
Synonym: LEPBI_I2292
Alternate gene names: NA
Gene position: 2362830-2361961 (Counterclockwise)
Preceding gene: 183221668
Following gene: 183221666
Centisome position: 65.64
GC content: 35.98
Gene sequence:
>870_bases ATGGAATCATTAGACAAAGTATTTTCCATTCAATTAAAAGGTGGTTTGGACGGAACCAGTGCAGAAGATTTTTATCGTTA CTTTGAGTCACAACTGAACAAAGGGTATCGAAAGTTTTTATTCCAAATGGGAGCTTTGGATTATATCACTTCCAATGGAA TCAGTATCCTGATTAAAATTCACAAACAGATTGTGAAGTCGAATGCGGTATATGCCATTTATGGATTCAAATCGGAAGTG GAAGACGTTTTAAAACTAGTTGGTCTTTTTGATAAACTTCCTATCTTTCGAAATCATCATTCTGCAGAATCCTTTTTATT ACAAGTAGATGTCGCAACGAAAAAATCAGAAGAAACTGTAGTTCGAAAAGAAGGTGCAGAACCAATCGTAAAAGAGAAAG GATTGGAGAAACGATCGGAAGAAAATCAAATTCGATTTTATTTTACAGGAAAGTCGAAAGGGGAAGGGAAAGTTTCACAA GAGAAAGAACCAATTTCTCGTTTGGAATCCATCCAGGATGAAACGACTTCATCCAAATCCTCTCCATCTCCCATGGAAAC AGTACTCGAAGAAAAATTAAACCAACTTAGATTGGAAATCAAAGATTCCTTACATACAGAACTGGAAAGAAGGTTTTCTC TTTACAAATCAGGGAAGGAACCAGAAACCAAATTGGCCCAAATTCCCAGTTATATCCAATCGAAAACCAAACAATTGGAA ACGGTGGAAAGGATCATCCAATGTGAAGTTTGTGGCACTCGGTTACGATTGTTTAAATTTGGAAAACATGAATGTCCCAA TTGTAAAACTCAGTTCCAATTGAGTCCAAATGGTTCCATCCGTTTTCTTGAAAAATTAAATCCAATCTAA
Upstream 100 bases:
>100_bases TCCTGATGTGGAAGTTTTACCAGGCGGCCCAGTGGTGAATCAAATCAAAACTGATCCAAATGAACAGACAATTCAAGATG CAATTTTCTTAGGATAAATT
Downstream 100 bases:
>100_bases ATCCTGGTTTTATGACAAACCAAGATCGAGGGAATGGGTCGAGTACGAAACGGTCCCTTGCTTTATCCTTCTATACCTTT TTATCTAGAATTTTAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MESLDKVFSIQLKGGLDGTSAEDFYRYFESQLNKGYRKFLFQMGALDYITSNGISILIKIHKQIVKSNAVYAIYGFKSEV EDVLKLVGLFDKLPIFRNHHSAESFLLQVDVATKKSEETVVRKEGAEPIVKEKGLEKRSEENQIRFYFTGKSKGEGKVSQ EKEPISRLESIQDETTSSKSSPSPMETVLEEKLNQLRLEIKDSLHTELERRFSLYKSGKEPETKLAQIPSYIQSKTKQLE TVERIIQCEVCGTRLRLFKFGKHECPNCKTQFQLSPNGSIRFLEKLNPI
Sequences:
>Translated_289_residues MESLDKVFSIQLKGGLDGTSAEDFYRYFESQLNKGYRKFLFQMGALDYITSNGISILIKIHKQIVKSNAVYAIYGFKSEV EDVLKLVGLFDKLPIFRNHHSAESFLLQVDVATKKSEETVVRKEGAEPIVKEKGLEKRSEENQIRFYFTGKSKGEGKVSQ EKEPISRLESIQDETTSSKSSPSPMETVLEEKLNQLRLEIKDSLHTELERRFSLYKSGKEPETKLAQIPSYIQSKTKQLE TVERIIQCEVCGTRLRLFKFGKHECPNCKTQFQLSPNGSIRFLEKLNPI >Mature_289_residues MESLDKVFSIQLKGGLDGTSAEDFYRYFESQLNKGYRKFLFQMGALDYITSNGISILIKIHKQIVKSNAVYAIYGFKSEV EDVLKLVGLFDKLPIFRNHHSAESFLLQVDVATKKSEETVVRKEGAEPIVKEKGLEKRSEENQIRFYFTGKSKGEGKVSQ EKEPISRLESIQDETTSSKSSPSPMETVLEEKLNQLRLEIKDSLHTELERRFSLYKSGKEPETKLAQIPSYIQSKTKQLE TVERIIQCEVCGTRLRLFKFGKHECPNCKTQFQLSPNGSIRFLEKLNPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33133; Mature: 33133
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLDKVFSIQLKGGLDGTSAEDFYRYFESQLNKGYRKFLFQMGALDYITSNGISILIKI CCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH HKQIVKSNAVYAIYGFKSEVEDVLKLVGLFDKLPIFRNHHSAESFLLQVDVATKKSEETV HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCCHHHEEEEEECCCCCCHHHH VRKEGAEPIVKEKGLEKRSEENQIRFYFTGKSKGEGKVSQEKEPISRLESIQDETTSSKS HHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC SPSPMETVLEEKLNQLRLEIKDSLHTELERRFSLYKSGKEPETKLAQIPSYIQSKTKQLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TVERIIQCEVCGTRLRLFKFGKHECPNCKTQFQLSPNGSIRFLEKLNPI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEHHHHCCCC >Mature Secondary Structure MESLDKVFSIQLKGGLDGTSAEDFYRYFESQLNKGYRKFLFQMGALDYITSNGISILIKI CCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH HKQIVKSNAVYAIYGFKSEVEDVLKLVGLFDKLPIFRNHHSAESFLLQVDVATKKSEETV HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCCHHHEEEEEECCCCCCHHHH VRKEGAEPIVKEKGLEKRSEENQIRFYFTGKSKGEGKVSQEKEPISRLESIQDETTSSKS HHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC SPSPMETVLEEKLNQLRLEIKDSLHTELERRFSLYKSGKEPETKLAQIPSYIQSKTKQLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TVERIIQCEVCGTRLRLFKFGKHECPNCKTQFQLSPNGSIRFLEKLNPI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA