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The map label for this gene is mcp3 [H]

Identifier: 183221662

GI number: 183221662

Start: 2352728

End: 2354269

Strand: Reverse

Name: mcp3 [H]

Synonym: LEPBI_I2287

Alternate gene names: 183221662

Gene position: 2354269-2352728 (Counterclockwise)

Preceding gene: 183221666

Following gene: 183221661

Centisome position: 65.4

GC content: 39.49

Gene sequence:

>1542_bases
ATGGATTTAAGATTGGCAGCGGTTCTATTAGAACGCCAAAAAAAAGTTGATACATTTTTTGTTTGCGCAATTTTTGCTCA
CATTCCTCTGGTTTTATTGCTCTCTCTCGGTTACGGTGCAACCCTTGTTGTCACTGTTTCCGCTGTGATCATATCATCGC
TCTCGTTTTTGTTTTATCGTTTCTTCCGTGGAAGTTTTTTCTTACGAGCATGGAATGGAGCGGCGTTAATGCTCTTCAGT
GCCTTACTCATCCAAGCACAATTTGGTCGCATTGAGATGCATTTTCATGTTTTCAGTGCACTTGCCATTTTGTTTGTATA
TGAGGATTGGCGAGTTTTATTGGTGGCTGCCTTAACCATCGCCATACATCACTTAGTTGGTAATTACCTGCAAGAATTTG
GTGTCGTGTTTTTTGAGACAAAAATAATTGTGTATAGTTATGGAACAGGGCTTGATATAGTATTTACTCATGCATTATTC
GTTGTGATGGAAACAGGGATTCTAATTTTCTTCTCCTACAGGTCCGTCCTTGATCTCAGACTCCAAATTGAAACCCAAAC
CAATTTAGAAACCGTGATGGCTGGAGTTACCGCTGCCATCGACGAAGTTTCCCAAGGGACTAAGGCCTATTTAGAAAATT
CGAATCAAATTGCAGTCGCTGTCAAAGAATTTGAGTCCTCCTTTCAAAACCAATCATCATCCATCGAAGCCATCTCCGCT
GCGACAGAAGAAACCACTGCTTCCAGCCAATTGATTTTGGAAGGTAGCAATCGACAAATCAAAGAAGTTAAAACAGTGGA
AGAGTTAAACAGAAACTTATTCAACTTGAACGAAGGGTTTGTGAAATCATTAGAGGTGATGCGAAGTAAAATCCAAGAAT
CAGCAGAAAGTGTCAAAAAAACGGAATCGGAATTTTCGACACTTTACCAATCCATGGAAGTCGCAGTCGATGATTCCGAA
AAGATGGAAGAAATATTGGATTTGATTTCAGACATTGCCGAAAAGGTAAACTTACTCTCGTTAAATGCTTCCATAGAAGC
AGCACGGGCTGGGGATGCCGGCCGTGGATTCGCAGTGGTTGCATCTGAGATTTCAAAACTAGCCGATTCTACTGCAGAAG
CGACAAAGAACATTTCAACAATTTCAGGTAAAATTAAGTCGGCCATTCAAATTAGCTTCAAACAGTCCAACCAAATCAAC
CAAACTGTCCAAGGGTTTGTGAAATCCATTTTATCCTCCGAAGTAGGGATGGGTGAGTTAACGGAAAAAATATCAGGGAC
CCTATCTGCTTTCGAAAAACAAGAAGATGCTCTCACAACTTTGGATCAAATCGCTCAAGAGATGCAACTTTCGAGCAAAG
AACAATCTACGAGTATGGTAGAAATTTCAAATTCCATAATGGATTTAAATTTAAAAACACAAACCAATTTAAATACGAGC
TCGGGAATGATTTCGTTTATCGACAAAGGGAATGTGATTTTTGAAAATTTAAAAGAGTCAGTGGAAACTCTTTCTGCCAT
GATTGATCATGAAAATCCTTAA

Upstream 100 bases:

>100_bases
ACACGGATGTAGAATATAATTAAATGGGTTAGATTGAAAACAAGTTTCCATTCTAAATTTATTGACTGGTATTTTTACAC
ATTCCTACGTCTCATAGTAT

Downstream 100 bases:

>100_bases
TCTAGGATGGAAACAGACCTTCCTTTGGTTTTTTGTTTTTTTACTTTTGATTGGTCTTAGTGTATTTTTACATTCGGTAT
CAGGTAAATATCGTAACATT

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MDLRLAAVLLERQKKVDTFFVCAIFAHIPLVLLLSLGYGATLVVTVSAVIISSLSFLFYRFFRGSFFLRAWNGAALMLFS
ALLIQAQFGRIEMHFHVFSALAILFVYEDWRVLLVAALTIAIHHLVGNYLQEFGVVFFETKIIVYSYGTGLDIVFTHALF
VVMETGILIFFSYRSVLDLRLQIETQTNLETVMAGVTAAIDEVSQGTKAYLENSNQIAVAVKEFESSFQNQSSSIEAISA
ATEETTASSQLILEGSNRQIKEVKTVEELNRNLFNLNEGFVKSLEVMRSKIQESAESVKKTESEFSTLYQSMEVAVDDSE
KMEEILDLISDIAEKVNLLSLNASIEAARAGDAGRGFAVVASEISKLADSTAEATKNISTISGKIKSAIQISFKQSNQIN
QTVQGFVKSILSSEVGMGELTEKISGTLSAFEKQEDALTTLDQIAQEMQLSSKEQSTSMVEISNSIMDLNLKTQTNLNTS
SGMISFIDKGNVIFENLKESVETLSAMIDHENP

Sequences:

>Translated_513_residues
MDLRLAAVLLERQKKVDTFFVCAIFAHIPLVLLLSLGYGATLVVTVSAVIISSLSFLFYRFFRGSFFLRAWNGAALMLFS
ALLIQAQFGRIEMHFHVFSALAILFVYEDWRVLLVAALTIAIHHLVGNYLQEFGVVFFETKIIVYSYGTGLDIVFTHALF
VVMETGILIFFSYRSVLDLRLQIETQTNLETVMAGVTAAIDEVSQGTKAYLENSNQIAVAVKEFESSFQNQSSSIEAISA
ATEETTASSQLILEGSNRQIKEVKTVEELNRNLFNLNEGFVKSLEVMRSKIQESAESVKKTESEFSTLYQSMEVAVDDSE
KMEEILDLISDIAEKVNLLSLNASIEAARAGDAGRGFAVVASEISKLADSTAEATKNISTISGKIKSAIQISFKQSNQIN
QTVQGFVKSILSSEVGMGELTEKISGTLSAFEKQEDALTTLDQIAQEMQLSSKEQSTSMVEISNSIMDLNLKTQTNLNTS
SGMISFIDKGNVIFENLKESVETLSAMIDHENP
>Mature_513_residues
MDLRLAAVLLERQKKVDTFFVCAIFAHIPLVLLLSLGYGATLVVTVSAVIISSLSFLFYRFFRGSFFLRAWNGAALMLFS
ALLIQAQFGRIEMHFHVFSALAILFVYEDWRVLLVAALTIAIHHLVGNYLQEFGVVFFETKIIVYSYGTGLDIVFTHALF
VVMETGILIFFSYRSVLDLRLQIETQTNLETVMAGVTAAIDEVSQGTKAYLENSNQIAVAVKEFESSFQNQSSSIEAISA
ATEETTASSQLILEGSNRQIKEVKTVEELNRNLFNLNEGFVKSLEVMRSKIQESAESVKKTESEFSTLYQSMEVAVDDSE
KMEEILDLISDIAEKVNLLSLNASIEAARAGDAGRGFAVVASEISKLADSTAEATKNISTISGKIKSAIQISFKQSNQIN
QTVQGFVKSILSSEVGMGELTEKISGTLSAFEKQEDALTTLDQIAQEMQLSSKEQSTSMVEISNSIMDLNLKTQTNLNTS
SGMISFIDKGNVIFENLKESVETLSAMIDHENP

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=25.3205128205128, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788194, Length=144, Percent_Identity=34.0277777777778, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788195, Length=186, Percent_Identity=27.9569892473118, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789453, Length=146, Percent_Identity=30.8219178082192, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI2367378, Length=182, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 56569; Mature: 56569

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRLAAVLLERQKKVDTFFVCAIFAHIPLVLLLSLGYGATLVVTVSAVIISSLSFLFYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FFRGSFFLRAWNGAALMLFSALLIQAQFGRIEMHFHVFSALAILFVYEDWRVLLVAALTI
HHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIHHLVGNYLQEFGVVFFETKIIVYSYGTGLDIVFTHALFVVMETGILIFFSYRSVLDLR
HHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEEHHHHHEEE
LQIETQTNLETVMAGVTAAIDEVSQGTKAYLENSNQIAVAVKEFESSFQNQSSSIEAISA
EEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHH
ATEETTASSQLILEGSNRQIKEVKTVEELNRNLFNLNEGFVKSLEVMRSKIQESAESVKK
HHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TESEFSTLYQSMEVAVDDSEKMEEILDLISDIAEKVNLLSLNASIEAARAGDAGRGFAVV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCHHHH
ASEISKLADSTAEATKNISTISGKIKSAIQISFKQSNQINQTVQGFVKSILSSEVGMGEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH
TEKISGTLSAFEKQEDALTTLDQIAQEMQLSSKEQSTSMVEISNSIMDLNLKTQTNLNTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
SGMISFIDKGNVIFENLKESVETLSAMIDHENP
CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDLRLAAVLLERQKKVDTFFVCAIFAHIPLVLLLSLGYGATLVVTVSAVIISSLSFLFYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FFRGSFFLRAWNGAALMLFSALLIQAQFGRIEMHFHVFSALAILFVYEDWRVLLVAALTI
HHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIHHLVGNYLQEFGVVFFETKIIVYSYGTGLDIVFTHALFVVMETGILIFFSYRSVLDLR
HHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEEHHHHHEEE
LQIETQTNLETVMAGVTAAIDEVSQGTKAYLENSNQIAVAVKEFESSFQNQSSSIEAISA
EEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHH
ATEETTASSQLILEGSNRQIKEVKTVEELNRNLFNLNEGFVKSLEVMRSKIQESAESVKK
HHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TESEFSTLYQSMEVAVDDSEKMEEILDLISDIAEKVNLLSLNASIEAARAGDAGRGFAVV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCHHHH
ASEISKLADSTAEATKNISTISGKIKSAIQISFKQSNQINQTVQGFVKSILSSEVGMGEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH
TEKISGTLSAFEKQEDALTTLDQIAQEMQLSSKEQSTSMVEISNSIMDLNLKTQTNLNTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
SGMISFIDKGNVIFENLKESVETLSAMIDHENP
CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]