Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221543
Identifier: 183221543
GI number: 183221543
Start: 2252101
End: 2252781
Strand: Direct
Name: 183221543
Synonym: LEPBI_I2162
Alternate gene names: NA
Gene position: 2252101-2252781 (Clockwise)
Preceding gene: 183221542
Following gene: 183221544
Centisome position: 62.56
GC content: 25.11
Gene sequence:
>681_bases ATGGAAATAAAACCAACGTTTGATCATTTTCTCATTTATTCTCAAAACTTAGAATCAGATTTTAAAAGATTTAAAGATCG TTTTGACTTTCCAATTATATATCCGATAACAAATTACGGTGTTTTCTCAAGTTGTATGTTTGCCTGTAAAAACTCCATTT TAGAGTTGGTAAACTATGAGAATCCAAAAATTCCAGAAAATTACAAGGGATCGACAATTTGGTTCTCTGGATTTGCATTG AAATCTGACCTAACTATAGATAAAATATTGTCAGGTTTAACAAATTCTAACCTAAAAATATCTGATATTATTATTCAAAA TGTAAAAGATAAAGATGGAAACAATATTCCGATTACCAAAATTCTGATGATTAATGAATTATTCAATTTTTTCCAAGTCT TTTATATACAATACTTAAATAGATTTTTAGAAGAAAAATTTATCGAAACTTCTAAAGAAGCAAAATGGGAAATTCTTAGT TTCGAAGTAAATGAAAATCAGTCAGATACAATTAGTGAAAAATTAAAAAATGCCGGTTTTTCTTTTTTCAAAAATGATAT TTTTTACGATAACAATAAAATAAAGTTTACATTAAAAAAATCGAATTTCGATTTTCCGATAGTTAGCTCATTTCTATTAA AATCAAACAAAGAAATTGTTGATTTGGTAAAGTTTTTCTAA
Upstream 100 bases:
>100_bases ATTCACAATCCATTTCAAAACAAATTACGGCATAATAAAAACATACAGTTAAATTTCGTTATGCGTAATGCCATAAAACT TTAAATTATTAATAGCTGAC
Downstream 100 bases:
>100_bases AAAATATGGCACTACGCATAACATCGGCTAAACACTGCGCTTCGGGTCTGACGCCCTCGCTTGGCCTTCGGCACATTCCT CTCCGTCACACTCCTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEIKPTFDHFLIYSQNLESDFKRFKDRFDFPIIYPITNYGVFSSCMFACKNSILELVNYENPKIPENYKGSTIWFSGFAL KSDLTIDKILSGLTNSNLKISDIIIQNVKDKDGNNIPITKILMINELFNFFQVFYIQYLNRFLEEKFIETSKEAKWEILS FEVNENQSDTISEKLKNAGFSFFKNDIFYDNNKIKFTLKKSNFDFPIVSSFLLKSNKEIVDLVKFF
Sequences:
>Translated_226_residues MEIKPTFDHFLIYSQNLESDFKRFKDRFDFPIIYPITNYGVFSSCMFACKNSILELVNYENPKIPENYKGSTIWFSGFAL KSDLTIDKILSGLTNSNLKISDIIIQNVKDKDGNNIPITKILMINELFNFFQVFYIQYLNRFLEEKFIETSKEAKWEILS FEVNENQSDTISEKLKNAGFSFFKNDIFYDNNKIKFTLKKSNFDFPIVSSFLLKSNKEIVDLVKFF >Mature_226_residues MEIKPTFDHFLIYSQNLESDFKRFKDRFDFPIIYPITNYGVFSSCMFACKNSILELVNYENPKIPENYKGSTIWFSGFAL KSDLTIDKILSGLTNSNLKISDIIIQNVKDKDGNNIPITKILMINELFNFFQVFYIQYLNRFLEEKFIETSKEAKWEILS FEVNENQSDTISEKLKNAGFSFFKNDIFYDNNKIKFTLKKSNFDFPIVSSFLLKSNKEIVDLVKFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26622; Mature: 26622
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKPTFDHFLIYSQNLESDFKRFKDRFDFPIIYPITNYGVFSSCMFACKNSILELVNYE CCCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC NPKIPENYKGSTIWFSGFALKSDLTIDKILSGLTNSNLKISDIIIQNVKDKDGNNIPITK CCCCCCCCCCCEEEEECEEEECCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCHHH ILMINELFNFFQVFYIQYLNRFLEEKFIETSKEAKWEILSFEVNENQSDTISEKLKNAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCH SFFKNDIFYDNNKIKFTLKKSNFDFPIVSSFLLKSNKEIVDLVKFF HHHHCCEEECCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MEIKPTFDHFLIYSQNLESDFKRFKDRFDFPIIYPITNYGVFSSCMFACKNSILELVNYE CCCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC NPKIPENYKGSTIWFSGFALKSDLTIDKILSGLTNSNLKISDIIIQNVKDKDGNNIPITK CCCCCCCCCCCEEEEECEEEECCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCHHH ILMINELFNFFQVFYIQYLNRFLEEKFIETSKEAKWEILSFEVNENQSDTISEKLKNAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCH SFFKNDIFYDNNKIKFTLKKSNFDFPIVSSFLLKSNKEIVDLVKFF HHHHCCEEECCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA