Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221544
Identifier: 183221544
GI number: 183221544
Start: 2252967
End: 2253443
Strand: Direct
Name: 183221544
Synonym: LEPBI_I2163
Alternate gene names: NA
Gene position: 2252967-2253443 (Clockwise)
Preceding gene: 183221543
Following gene: 183221545
Centisome position: 62.59
GC content: 25.58
Gene sequence:
>477_bases GTGCAAAATTTCATTATGAAAATTAAGAATTTCAAATCAGCAATGCATAATTTTACACATTCATTCCTTAGCATTGATTA TACACATAGTGGAAAACTAGCAGTTAATGTGTTGTTAAAACTTAAATCCGAAGAAAATATTTCCATTGTTGAATTTGACT TTATAAATACTATTATTTCACCCAAAATAGCAATAGACGATGATAGTTTGATTCTTTTAAAAGATTATCAAAACTGGTTA CCGAAACATTTAAGAAATCATAATTGCGATTACACGCAACTAGAATGTCTAAATATAATTACTCAACTTAACAAGAATAA TATATTCAAACCAAAAACTATGGAGAATACATTTCAAATTGAAATAGAATCAGAAACAACTTATAAATTGAAAAATCGAG AAAAACAGTCTTTTAAATTATCTTTAATTGAAATCATAAATGCGAACTATCTTGAGAATGGAATTCCTAATCTGTAA
Upstream 100 bases:
>100_bases TCACACTCCTTGCAACGCAAGGAGATGTGCCGACGCTAACGCCTCCTCCGGAGGCTCAGCTCCGAGGAACGTCGTTTAGC CTCGTTCGTTATGCGTAATA
Downstream 100 bases:
>100_bases ATCTTGTTGATAAGAGAATTTTAAATATAAAGTTCTGTATTTACGCTCTGTCTTACAGATTACGTTTATACAATTTCATT TAAATGAGAAAATATTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MQNFIMKIKNFKSAMHNFTHSFLSIDYTHSGKLAVNVLLKLKSEENISIVEFDFINTIISPKIAIDDDSLILLKDYQNWL PKHLRNHNCDYTQLECLNIITQLNKNNIFKPKTMENTFQIEIESETTYKLKNREKQSFKLSLIEIINANYLENGIPNL
Sequences:
>Translated_158_residues MQNFIMKIKNFKSAMHNFTHSFLSIDYTHSGKLAVNVLLKLKSEENISIVEFDFINTIISPKIAIDDDSLILLKDYQNWL PKHLRNHNCDYTQLECLNIITQLNKNNIFKPKTMENTFQIEIESETTYKLKNREKQSFKLSLIEIINANYLENGIPNL >Mature_158_residues MQNFIMKIKNFKSAMHNFTHSFLSIDYTHSGKLAVNVLLKLKSEENISIVEFDFINTIISPKIAIDDDSLILLKDYQNWL PKHLRNHNCDYTQLECLNIITQLNKNNIFKPKTMENTFQIEIESETTYKLKNREKQSFKLSLIEIINANYLENGIPNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18540; Mature: 18540
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNFIMKIKNFKSAMHNFTHSFLSIDYTHSGKLAVNVLLKLKSEENISIVEFDFINTIIS CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCCCEEEEEHHHHHHHC PKIAIDDDSLILLKDYQNWLPKHLRNHNCDYTQLECLNIITQLNKNNIFKPKTMENTFQI CEEEECCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE EIESETTYKLKNREKQSFKLSLIEIINANYLENGIPNL EECCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MQNFIMKIKNFKSAMHNFTHSFLSIDYTHSGKLAVNVLLKLKSEENISIVEFDFINTIIS CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCCCEEEEEHHHHHHHC PKIAIDDDSLILLKDYQNWLPKHLRNHNCDYTQLECLNIITQLNKNNIFKPKTMENTFQI CEEEECCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE EIESETTYKLKNREKQSFKLSLIEIINANYLENGIPNL EECCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA