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The map label for this gene is ccmB

Identifier: 183221311

GI number: 183221311

Start: 2016113

End: 2016772

Strand: Reverse

Name: ccmB

Synonym: LEPBI_I1928

Alternate gene names: NA

Gene position: 2016772-2016113 (Counterclockwise)

Preceding gene: 183221312

Following gene: 183221310

Centisome position: 56.03

GC content: 39.39

Gene sequence:

>660_bases
ATGTTTTTGTTTCTTAGTCTGTTAAAAAAAGATTTTTATCTGATAGGAAGGTCCCTCGGTGGGATCGTTTCGCTTTTTAC
CTTAAGTGTTTCAGTCGTTTTTATTTTTTATACTGCGATCGAAGTCAATGAGATCTTATCAACTCGGAGCATTCGAGGCC
TGAAATGGGCGATCATATTCATTTTAAATTTTGTCATCATCAGCCAAAGTTTATGGGAAGAAAGAGAATCGATGGGTTGG
GAAGCAAGTTTAAGTTTTGTAAGTCCAACCGCACTTTATCTCAGTAAGTCCCTCACCATTTGGTTTTGTACCATCCTTGT
GAATGCACTCCTTGTTCTTGTCCTATCGGTATTTTTTCAGAATATGTCTTTGGACCGGTACTTAGGGGAGTGGCTTTTTG
CCAATTTAGGAAGTGGTTGTTTGGTGTTTTTGGGTGTATCCCTTGGTGTCATCGCCTTTGAAAGCCGATTGAAGGAAATC
ATCATCCCACTCTTACAATTACCGTTTTCCATCCCTTTGTTTTTATTTGGACTGGAGGCAGAGAACCGGTATTGGCTTGA
GAACGGGTTTTATTTACCATCGGTGGGTTTACTTTTCTTTTTCCTTTTATTTTATGGGACTTTAGGGTCTGTGATGGTGG
AAACCTTAAAGAATGAGTAG

Upstream 100 bases:

>100_bases
ATTCTCAATGAAGAAAAAGGATCTAGACTCATCCTTGTTGTCCTCCATTCCATTCCCAATGAATTAGAATGTTCGGGGAA
AATTTCCATTCAGCAGGGGA

Downstream 100 bases:

>100_bases
GGCAGTTGTATTTTCTCCTAGAATTTCTTTTCTAGTCTGAAAATCTGGAAAAAAATGGAACGTAAAATCAAACTGATTCA
CCCGGCAATCGACATTATTT

Product: cytochrome c-type biogenesis protein CcmB

Products: NA

Alternate protein names: Heme Exporter Protein B

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFLFLSLLKKDFYLIGRSLGGIVSLFTLSVSVVFIFYTAIEVNEILSTRSIRGLKWAIIFILNFVIISQSLWEERESMGW
EASLSFVSPTALYLSKSLTIWFCTILVNALLVLVLSVFFQNMSLDRYLGEWLFANLGSGCLVFLGVSLGVIAFESRLKEI
IIPLLQLPFSIPLFLFGLEAENRYWLENGFYLPSVGLLFFFLLFYGTLGSVMVETLKNE

Sequences:

>Translated_219_residues
MFLFLSLLKKDFYLIGRSLGGIVSLFTLSVSVVFIFYTAIEVNEILSTRSIRGLKWAIIFILNFVIISQSLWEERESMGW
EASLSFVSPTALYLSKSLTIWFCTILVNALLVLVLSVFFQNMSLDRYLGEWLFANLGSGCLVFLGVSLGVIAFESRLKEI
IIPLLQLPFSIPLFLFGLEAENRYWLENGFYLPSVGLLFFFLLFYGTLGSVMVETLKNE
>Mature_219_residues
MFLFLSLLKKDFYLIGRSLGGIVSLFTLSVSVVFIFYTAIEVNEILSTRSIRGLKWAIIFILNFVIISQSLWEERESMGW
EASLSFVSPTALYLSKSLTIWFCTILVNALLVLVLSVFFQNMSLDRYLGEWLFANLGSGCLVFLGVSLGVIAFESRLKEI
IIPLLQLPFSIPLFLFGLEAENRYWLENGFYLPSVGLLFFFLLFYGTLGSVMVETLKNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24901; Mature: 24901

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFLSLLKKDFYLIGRSLGGIVSLFTLSVSVVFIFYTAIEVNEILSTRSIRGLKWAIIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ILNFVIISQSLWEERESMGWEASLSFVSPTALYLSKSLTIWFCTILVNALLVLVLSVFFQ
HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMSLDRYLGEWLFANLGSGCLVFLGVSLGVIAFESRLKEIIIPLLQLPFSIPLFLFGLEA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHEEECC
ENRYWLENGFYLPSVGLLFFFLLFYGTLGSVMVETLKNE
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLFLSLLKKDFYLIGRSLGGIVSLFTLSVSVVFIFYTAIEVNEILSTRSIRGLKWAIIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ILNFVIISQSLWEERESMGWEASLSFVSPTALYLSKSLTIWFCTILVNALLVLVLSVFFQ
HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMSLDRYLGEWLFANLGSGCLVFLGVSLGVIAFESRLKEIIIPLLQLPFSIPLFLFGLEA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHEEECC
ENRYWLENGFYLPSVGLLFFFLLFYGTLGSVMVETLKNE
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA