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The map label for this gene is ccmC

Identifier: 183221310

GI number: 183221310

Start: 2015360

End: 2016058

Strand: Reverse

Name: ccmC

Synonym: LEPBI_I1927

Alternate gene names: NA

Gene position: 2016058-2015360 (Counterclockwise)

Preceding gene: 183221311

Following gene: 183221309

Centisome position: 56.01

GC content: 39.48

Gene sequence:

>699_bases
ATGGAACGTAAAATCAAACTGATTCACCCGGCAATCGACATTATTTTTTATTTCGTTGTTTGTTTCACATTGGTTGTTGC
CGTTTTTGTTTCCATCCTTTATCCCAATGTGATTTTGGAACAAGGACTAAGCCATCGAATCTTTTACCTCCATGTACCGG
TCGCCTGGGTTGCATTATACGGACCCCTCTTGTCTTTTGTATTTTCTTTGATTTATTTTCTTAAAAAAGATCTACTTTGG
GATCGACTTGCCTTTACTGCAAACCAACTCGCTTTTGTTTTTGCGATCGGAGTTTTGTTTTCGGGTCCTATTTGGGCATA
CAGCGCATGGGGTGTTCCATGGGACAAAACAGATGCTAGGTTACAGTCATTTTTTATCCTCTGCATTTCCTTACTCAGTT
ATTTTATCTTCCGTTATTTAGTGCCTTCCCGAAAAAAAAAGGCCATATTATCTGCCTACCTTTCTGTACTTTGTGCAGTG
AGTGCCGTTCTCACTTGGGGTGCCATTCGTTGGATTGAAAATCCAGGCAACCATCCAGGCAGTGTCCTTGGAAAAGGGGG
AATGGATTCGGATATGAAACAAACGATGTGGCTTGGCGTATTGGCTTATCATTTTTTGTTTTTGTTTTTATTTCTACTTT
CGAATCGAAACGAAAAGATCCAAGAACTGAAAAATACTCTTAGGTCTGAATTGAATTAA

Upstream 100 bases:

>100_bases
TGGGACTTTAGGGTCTGTGATGGTGGAAACCTTAAAGAATGAGTAGGGCAGTTGTATTTTCTCCTAGAATTTCTTTTCTA
GTCTGAAAATCTGGAAAAAA

Downstream 100 bases:

>100_bases
TCTTCTATGGAACCGAAGGATAGCCAACATACAATTCTCATTGTAGACGATGTTCCAGAAAATGTGGAACTACTCAAATA
CCTTTTGTTACAGGAAGGAT

Product: cytochrome c-type biogenesis protein CcmC

Products: NA

Alternate protein names: Heme Exporter Protein C; Cytochrome C-Type Biogenesis Protein CcmC; Heme Exporter Protein CcmC; Cytochrome C-Type Biogenesis Protein Heme Exporter Protein; Heme Exporter Membrane Protein; ABC Transporter Permease

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MERKIKLIHPAIDIIFYFVVCFTLVVAVFVSILYPNVILEQGLSHRIFYLHVPVAWVALYGPLLSFVFSLIYFLKKDLLW
DRLAFTANQLAFVFAIGVLFSGPIWAYSAWGVPWDKTDARLQSFFILCISLLSYFIFRYLVPSRKKKAILSAYLSVLCAV
SAVLTWGAIRWIENPGNHPGSVLGKGGMDSDMKQTMWLGVLAYHFLFLFLFLLSNRNEKIQELKNTLRSELN

Sequences:

>Translated_232_residues
MERKIKLIHPAIDIIFYFVVCFTLVVAVFVSILYPNVILEQGLSHRIFYLHVPVAWVALYGPLLSFVFSLIYFLKKDLLW
DRLAFTANQLAFVFAIGVLFSGPIWAYSAWGVPWDKTDARLQSFFILCISLLSYFIFRYLVPSRKKKAILSAYLSVLCAV
SAVLTWGAIRWIENPGNHPGSVLGKGGMDSDMKQTMWLGVLAYHFLFLFLFLLSNRNEKIQELKNTLRSELN
>Mature_232_residues
MERKIKLIHPAIDIIFYFVVCFTLVVAVFVSILYPNVILEQGLSHRIFYLHVPVAWVALYGPLLSFVFSLIYFLKKDLLW
DRLAFTANQLAFVFAIGVLFSGPIWAYSAWGVPWDKTDARLQSFFILCISLLSYFIFRYLVPSRKKKAILSAYLSVLCAV
SAVLTWGAIRWIENPGNHPGSVLGKGGMDSDMKQTMWLGVLAYHFLFLFLFLLSNRNEKIQELKNTLRSELN

Specific function: Unknown

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26628; Mature: 26628

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKIKLIHPAIDIIFYFVVCFTLVVAVFVSILYPNVILEQGLSHRIFYLHVPVAWVALY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
GPLLSFVFSLIYFLKKDLLWDRLAFTANQLAFVFAIGVLFSGPIWAYSAWGVPWDKTDAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH
LQSFFILCISLLSYFIFRYLVPSRKKKAILSAYLSVLCAVSAVLTWGAIRWIENPGNHPG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SVLGKGGMDSDMKQTMWLGVLAYHFLFLFLFLLSNRNEKIQELKNTLRSELN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERKIKLIHPAIDIIFYFVVCFTLVVAVFVSILYPNVILEQGLSHRIFYLHVPVAWVALY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
GPLLSFVFSLIYFLKKDLLWDRLAFTANQLAFVFAIGVLFSGPIWAYSAWGVPWDKTDAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH
LQSFFILCISLLSYFIFRYLVPSRKKKAILSAYLSVLCAVSAVLTWGAIRWIENPGNHPG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SVLGKGGMDSDMKQTMWLGVLAYHFLFLFLFLLSNRNEKIQELKNTLRSELN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA