| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221261
Identifier: 183221261
GI number: 183221261
Start: 1967833
End: 1968225
Strand: Direct
Name: 183221261
Synonym: LEPBI_I1877
Alternate gene names: NA
Gene position: 1967833-1968225 (Clockwise)
Preceding gene: 183221259
Following gene: 183221262
Centisome position: 54.67
GC content: 32.57
Gene sequence:
>393_bases TTGGTTCCTGATATGGCATTCACAATTCGATTCCGAGTTTGGGACAAACAAGAGAAAGAATTTTCTCAGAAAGGTTTTAG TTTAACCTTAGATGGAAAGTTATTAAAATTTGGACAACCTATATCTAATGAAGATAATTATATAGTCAATAGTTTCACTG GTCTCAGAGACAAATATGATAAAGAATTATTTGAAGAAGATATCATTGAACATACAGTTGCCAAAGGTGGGAATTTAACC CAACATACCGGCATTATACGATATAACAACGAACATGGTGCATTTTATATAGAAAATGGTCCTCCTCTTTTACAGTTGTT TTCGATCCGAAAAGTGGGAAACCCTTATGAAAATCCGATCCTTTATGATTTGTATTTAAAAAGTAAGTCTTGA
Upstream 100 bases:
>100_bases ACTGAAATCACCTTCATGGGGTAAATAATTGTCCCAATTCATCCATTGACCACTGATTTTTTTTTGAATTTTCCTTGGAA AGGACTTCGACTTACTTAAA
Downstream 100 bases:
>100_bases TCTTTTTTCGTTCCCTTTCCTTTTTCATTTTATTTCTCTCCATCCCTCTAGAAGCAAGTTCCCTTTTAGAGGATTATTGG GAAACCATTCAAAAAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVPDMAFTIRFRVWDKQEKEFSQKGFSLTLDGKLLKFGQPISNEDNYIVNSFTGLRDKYDKELFEEDIIEHTVAKGGNLT QHTGIIRYNNEHGAFYIENGPPLLQLFSIRKVGNPYENPILYDLYLKSKS
Sequences:
>Translated_130_residues MVPDMAFTIRFRVWDKQEKEFSQKGFSLTLDGKLLKFGQPISNEDNYIVNSFTGLRDKYDKELFEEDIIEHTVAKGGNLT QHTGIIRYNNEHGAFYIENGPPLLQLFSIRKVGNPYENPILYDLYLKSKS >Mature_130_residues MVPDMAFTIRFRVWDKQEKEFSQKGFSLTLDGKLLKFGQPISNEDNYIVNSFTGLRDKYDKELFEEDIIEHTVAKGGNLT QHTGIIRYNNEHGAFYIENGPPLLQLFSIRKVGNPYENPILYDLYLKSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15096; Mature: 15096
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPDMAFTIRFRVWDKQEKEFSQKGFSLTLDGKLLKFGQPISNEDNYIVNSFTGLRDKYD CCCCEEEEEEEEECCCHHHHHHHCCCEEEECCEEEECCCCCCCCCCEEEECCCCCHHHHH KELFEEDIIEHTVAKGGNLTQHTGIIRYNNEHGAFYIENGPPLLQLFSIRKVGNPYENPI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCEEHEEHHHCCCCCCCCE LYDLYLKSKS EEEEEEECCC >Mature Secondary Structure MVPDMAFTIRFRVWDKQEKEFSQKGFSLTLDGKLLKFGQPISNEDNYIVNSFTGLRDKYD CCCCEEEEEEEEECCCHHHHHHHCCCEEEECCEEEECCCCCCCCCCEEEECCCCCHHHHH KELFEEDIIEHTVAKGGNLTQHTGIIRYNNEHGAFYIENGPPLLQLFSIRKVGNPYENPI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCEEHEEHHHCCCCCCCCE LYDLYLKSKS EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA