| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221262
Identifier: 183221262
GI number: 183221262
Start: 1968222
End: 1969703
Strand: Direct
Name: 183221262
Synonym: LEPBI_I1878
Alternate gene names: NA
Gene position: 1968222-1969703 (Clockwise)
Preceding gene: 183221261
Following gene: 183221263
Centisome position: 54.68
GC content: 34.21
Gene sequence:
>1482_bases TTGATCTTTTTTCGTTCCCTTTCCTTTTTCATTTTATTTCTCTCCATCCCTCTAGAAGCAAGTTCCCTTTTAGAGGATTA TTGGGAAACCATTCAAAAAACGAAGGCAAAATTTGAATTAGAAGATGATAGCCCCAAACGATTTCGATTTGGTTTTTCCA ATCATTCACCATCCGTCTTACACAAAGAATCTTTAAATCATGAAGTGTTTTGGTTCTGTCAAAATTACATTCAAAAATAC CACTCAAATTTTCCATACCCACGATTCAAAGAAGAGATCAGGTCCCATTTAAACGATTTGTATGGAGACATCTCACAAAA TTTTTTAAGTGGGAAAACAAGTTTTACCTGTTACTCCGGATGGAAAAATGGAAGTTCACTTCTAAAAATTCATTTCTTTT TAAATGAAGAAACATTTTTCCCCTTTCGATATGACCACTACAACCAAAACGGACAACTTTACCTGACAGAGGAAGATGAA ACCAAAAATGGGAAAAAGGATAGTTTTACTTACTATAGTAGCGCTGGTTGTCCAAAAGAAATCACTAAGGATAAAAATGA TTTTGGTGCCATTGACGAATGGTGGTACTTTCAAAATTGTAAATTGATACGTATTGAATACGATGCAAACGAAAACGGAT TTAAAGAAAGGATATGTTATTACGAAAATAACAAAGAAACGTATTGTGAAGGTGTAGGTGAAAAAGAAGAACGAGAAGCC ATTCTTCTCGAATCCCAAGAAAAATACAAAGAGGCATTAAAAGTGTATCGCAAGTCACTTGCAGAATACAAAAAAGAAGT TCCAATTGGTACACTACGCACTTGTTCCTTACTTAAAAAAATTGCCAATATCGAATACAATGAAAAAGAATTTAGTTCAT TTACTAAAACTTTAGATGAATTTTTTTCATACCGAGTCTGCGAATCCGACTCCTTAGATGTTCTGCTATATAAATCGTAT TATTACCTGTATGTATTGAATGACTACGTTTCCGCAAAGGAAAGTTATCGTAAAACTGCGGAAATTTACAGAAAGGTACA TGGCGAAATTAGTCCCGAAATTTCGCTCAATTTGGCCTACGCTTATTTAATGGTAAAAGAACCTAAAGCTTGTTTGACGA GTTTGGAAAAATTAAACCCTCGAAGGCTTATGCCTTATCCAAGATTTTTTTTATACTATTATAGAGGTTCTTGTGAACTG AGTTTGGGGTTATTTGAAGAATCCTATGTGAATCTAAAACGTGCTCAGATTTTGGGTGGTGAAAAGGTATTTTTGCCCAT TGTCTATTATAAATTGGCAAGAGCATCCTATGCAACAAAAAGGGAAAGTGAAGGTAAACTTTGGGCCGAACAAGCTCTTT TCCTTGATTTAGAGCTCTTCCAAAAAATTGAATCGGATCCGATCTTTGTCAATTTTTTAGAATCCACAAGTGGCAAATCC TACAAAAGAAAATATTACTTGAATAAAGTGCAGAAACCATGA
Upstream 100 bases:
>100_bases TAGAAAATGGTCCTCCTCTTTTACAGTTGTTTTCGATCCGAAAAGTGGGAAACCCTTATGAAAATCCGATCCTTTATGAT TTGTATTTAAAAAGTAAGTC
Downstream 100 bases:
>100_bases GAGTTTAGCTCCTACGGAGACAGATTTGATTCATGAAAAATTTTACGACGCTGAATGATGTATTTTATTATGCGAAAAAA AACTACGGTTCCAAAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MIFFRSLSFFILFLSIPLEASSLLEDYWETIQKTKAKFELEDDSPKRFRFGFSNHSPSVLHKESLNHEVFWFCQNYIQKY HSNFPYPRFKEEIRSHLNDLYGDISQNFLSGKTSFTCYSGWKNGSSLLKIHFFLNEETFFPFRYDHYNQNGQLYLTEEDE TKNGKKDSFTYYSSAGCPKEITKDKNDFGAIDEWWYFQNCKLIRIEYDANENGFKERICYYENNKETYCEGVGEKEEREA ILLESQEKYKEALKVYRKSLAEYKKEVPIGTLRTCSLLKKIANIEYNEKEFSSFTKTLDEFFSYRVCESDSLDVLLYKSY YYLYVLNDYVSAKESYRKTAEIYRKVHGEISPEISLNLAYAYLMVKEPKACLTSLEKLNPRRLMPYPRFFLYYYRGSCEL SLGLFEESYVNLKRAQILGGEKVFLPIVYYKLARASYATKRESEGKLWAEQALFLDLELFQKIESDPIFVNFLESTSGKS YKRKYYLNKVQKP
Sequences:
>Translated_493_residues MIFFRSLSFFILFLSIPLEASSLLEDYWETIQKTKAKFELEDDSPKRFRFGFSNHSPSVLHKESLNHEVFWFCQNYIQKY HSNFPYPRFKEEIRSHLNDLYGDISQNFLSGKTSFTCYSGWKNGSSLLKIHFFLNEETFFPFRYDHYNQNGQLYLTEEDE TKNGKKDSFTYYSSAGCPKEITKDKNDFGAIDEWWYFQNCKLIRIEYDANENGFKERICYYENNKETYCEGVGEKEEREA ILLESQEKYKEALKVYRKSLAEYKKEVPIGTLRTCSLLKKIANIEYNEKEFSSFTKTLDEFFSYRVCESDSLDVLLYKSY YYLYVLNDYVSAKESYRKTAEIYRKVHGEISPEISLNLAYAYLMVKEPKACLTSLEKLNPRRLMPYPRFFLYYYRGSCEL SLGLFEESYVNLKRAQILGGEKVFLPIVYYKLARASYATKRESEGKLWAEQALFLDLELFQKIESDPIFVNFLESTSGKS YKRKYYLNKVQKP >Mature_493_residues MIFFRSLSFFILFLSIPLEASSLLEDYWETIQKTKAKFELEDDSPKRFRFGFSNHSPSVLHKESLNHEVFWFCQNYIQKY HSNFPYPRFKEEIRSHLNDLYGDISQNFLSGKTSFTCYSGWKNGSSLLKIHFFLNEETFFPFRYDHYNQNGQLYLTEEDE TKNGKKDSFTYYSSAGCPKEITKDKNDFGAIDEWWYFQNCKLIRIEYDANENGFKERICYYENNKETYCEGVGEKEEREA ILLESQEKYKEALKVYRKSLAEYKKEVPIGTLRTCSLLKKIANIEYNEKEFSSFTKTLDEFFSYRVCESDSLDVLLYKSY YYLYVLNDYVSAKESYRKTAEIYRKVHGEISPEISLNLAYAYLMVKEPKACLTSLEKLNPRRLMPYPRFFLYYYRGSCEL SLGLFEESYVNLKRAQILGGEKVFLPIVYYKLARASYATKRESEGKLWAEQALFLDLELFQKIESDPIFVNFLESTSGKS YKRKYYLNKVQKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58641; Mature: 58641
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFRSLSFFILFLSIPLEASSLLEDYWETIQKTKAKFELEDDSPKRFRFGFSNHSPSVL CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCCCCH HKESLNHEVFWFCQNYIQKYHSNFPYPRFKEEIRSHLNDLYGDISQNFLSGKTSFTCYSG HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC WKNGSSLLKIHFFLNEETFFPFRYDHYNQNGQLYLTEEDETKNGKKDSFTYYSSAGCPKE CCCCCCEEEEEEEECCCEECCEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHH ITKDKNDFGAIDEWWYFQNCKLIRIEYDANENGFKERICYYENNKETYCEGVGEKEEREA HHCCCCCCCCCHHEEEECCCEEEEEEECCCCCCCHHCEEEEECCCCHHHCCCCCCHHCCE ILLESQEKYKEALKVYRKSLAEYKKEVPIGTLRTCSLLKKIANIEYNEKEFSSFTKTLDE EEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFSYRVCESDSLDVLLYKSYYYLYVLNDYVSAKESYRKTAEIYRKVHGEISPEISLNLAY HHCEEECCCCCCCEEEEECEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE AYLMVKEPKACLTSLEKLNPRRLMPYPRFFLYYYRGSCELSLGLFEESYVNLKRAQILGG EEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHHCCC EKVFLPIVYYKLARASYATKRESEGKLWAEQALFLDLELFQKIESDPIFVNFLESTSGKS CEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH YKRKYYLNKVQKP HHHHHHHHHCCCC >Mature Secondary Structure MIFFRSLSFFILFLSIPLEASSLLEDYWETIQKTKAKFELEDDSPKRFRFGFSNHSPSVL CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCCCCH HKESLNHEVFWFCQNYIQKYHSNFPYPRFKEEIRSHLNDLYGDISQNFLSGKTSFTCYSG HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC WKNGSSLLKIHFFLNEETFFPFRYDHYNQNGQLYLTEEDETKNGKKDSFTYYSSAGCPKE CCCCCCEEEEEEEECCCEECCEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHH ITKDKNDFGAIDEWWYFQNCKLIRIEYDANENGFKERICYYENNKETYCEGVGEKEEREA HHCCCCCCCCCHHEEEECCCEEEEEEECCCCCCCHHCEEEEECCCCHHHCCCCCCHHCCE ILLESQEKYKEALKVYRKSLAEYKKEVPIGTLRTCSLLKKIANIEYNEKEFSSFTKTLDE EEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFSYRVCESDSLDVLLYKSYYYLYVLNDYVSAKESYRKTAEIYRKVHGEISPEISLNLAY HHCEEECCCCCCCEEEEECEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE AYLMVKEPKACLTSLEKLNPRRLMPYPRFFLYYYRGSCELSLGLFEESYVNLKRAQILGG EEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHHCCC EKVFLPIVYYKLARASYATKRESEGKLWAEQALFLDLELFQKIESDPIFVNFLESTSGKS CEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH YKRKYYLNKVQKP HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA