| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 183221259
GI number: 183221259
Start: 1965579
End: 1966958
Strand: Direct
Name: crp [C]
Synonym: LEPBI_I1875
Alternate gene names: 183221259
Gene position: 1965579-1966958 (Clockwise)
Preceding gene: 183221257
Following gene: 183221261
Centisome position: 54.6
GC content: 37.61
Gene sequence:
>1380_bases ATGTCGATACTAAAGAATATGATCCATCCAAATTCTCCCTACAAACGAATCTGGGATCTATTTGTTTTTTTATGCATTAC GTATTTTGCCATCGAAGTGCCGATTCGGCTTGTTTTCCCTCATAAATTGACCGTAGGTGTCACCCACTTTGAAAGGTTCA TTCAAATCATTTTTGGAATTGATTTGGTTTTAAACTTTTTCACTTCCATTCTCAAAGACAGACTCGTCATTCAAAACAAA AAAATCGTCGCGAAAACATATCTAAAGTCATGGTTTCTCATCGATTTTTTATCTGCCTTTCCATTTGACCTCTTTGGAGG TTTTTTCTTTGAATATTTTGGAGTTACGGATAGTTTAAAAATATTGCGTCTACTAAGATCTGTTAGGGTGTTCGAACTTT TTAAATCCCTTCGGATGCTTGCACTAGGTGCTGATTCGGAAGATCGATTTAAATTGATCGAAGTGATCAATCCCATGACC TTTCGATTGATCTTTTTTGTGTATTGGACAAGTCTCTTTGCCCATTGGGTGGCTTGCGGTTGGATTTACTTAACGCCTGA ATTTTTAGCAGATAAGGATATATACACTCGTTATATCAGGTCTTTATACTGGTCTGTCACCACACTGACAACCATCGGAT ATGGAGACATCACACCTACCACCAATCCGCAAACCATTTATACAATGGGGGTGATGATCCTAGGTGTTGGAATTTATGGG TATGTGATCGGTAATATTTCGACACTTCTCTCCAATTTAGATATTTCGCGTGTCACCTTCCAAGAAAAATTAAACACAAT CAACTCGTTCATTAAATATAAAAAATTACCGCCGCAACTTGCCAATCGGATTCGATCCTATTACATTAACCTTTGGGAAA ACAAACATGGAATTGATGAAACTGAAATTTGGAACCAACTTCCTTCGGGGATTAAAATCGATGTTTCGATGTTTTTACAC AACCATCTCATTTCAGTGGTTCCTTTTTTTAAAAATGCACCAGAAGAATTGAAACGTGAGGTTGTTTTAGAATTAAAACC TGCTTATTATATGAAGGGAGATGTGATCTTTCGGGAAGGAGATGTCCCCCATAATATGTATTTTTTATCCAAAGGTCAAG TGGAAGTGATCAAAGAAAAAACGGGAGAATTACTCGCAACACTCAATTCCGGGTCTTTTTTTGGAGAGATGAGTCTCATT GACGACTCCCTTCGCACAGCCACAATCAGAGCCGGTTCCTATTGTGATGTATATACTTTAAGTAAAGATGCTTTTAGCGA AATACTTAGACACCATCCCAGTTTTGCAAAACACATCAACGTGATTGCATTGGAACGAAAACAACACCAATCCAGTTTCA AAGAATCGGACGAATCGTAA
Upstream 100 bases:
>100_bases AGCATATCAAACTTGTTTCCACCAGCACCACCGAACATAATCACCTCTTCTACATTTCAGGATTTTTTTTCTAAGAAAGA ACGCAAATATAAAACTTCGG
Downstream 100 bases:
>100_bases AGAACAACAAAGTAAATTTACAAACGAAAATTCAAAATAGAATGTTCCGGGTCAACTAAGGCAATCGTCTCATCAGCCAA TCGATCAAAGGCATACCAAG
Product: putative cyclic-nucleotide-gated cation channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSILKNMIHPNSPYKRIWDLFVFLCITYFAIEVPIRLVFPHKLTVGVTHFERFIQIIFGIDLVLNFFTSILKDRLVIQNK KIVAKTYLKSWFLIDFLSAFPFDLFGGFFFEYFGVTDSLKILRLLRSVRVFELFKSLRMLALGADSEDRFKLIEVINPMT FRLIFFVYWTSLFAHWVACGWIYLTPEFLADKDIYTRYIRSLYWSVTTLTTIGYGDITPTTNPQTIYTMGVMILGVGIYG YVIGNISTLLSNLDISRVTFQEKLNTINSFIKYKKLPPQLANRIRSYYINLWENKHGIDETEIWNQLPSGIKIDVSMFLH NHLISVVPFFKNAPEELKREVVLELKPAYYMKGDVIFREGDVPHNMYFLSKGQVEVIKEKTGELLATLNSGSFFGEMSLI DDSLRTATIRAGSYCDVYTLSKDAFSEILRHHPSFAKHINVIALERKQHQSSFKESDES
Sequences:
>Translated_459_residues MSILKNMIHPNSPYKRIWDLFVFLCITYFAIEVPIRLVFPHKLTVGVTHFERFIQIIFGIDLVLNFFTSILKDRLVIQNK KIVAKTYLKSWFLIDFLSAFPFDLFGGFFFEYFGVTDSLKILRLLRSVRVFELFKSLRMLALGADSEDRFKLIEVINPMT FRLIFFVYWTSLFAHWVACGWIYLTPEFLADKDIYTRYIRSLYWSVTTLTTIGYGDITPTTNPQTIYTMGVMILGVGIYG YVIGNISTLLSNLDISRVTFQEKLNTINSFIKYKKLPPQLANRIRSYYINLWENKHGIDETEIWNQLPSGIKIDVSMFLH NHLISVVPFFKNAPEELKREVVLELKPAYYMKGDVIFREGDVPHNMYFLSKGQVEVIKEKTGELLATLNSGSFFGEMSLI DDSLRTATIRAGSYCDVYTLSKDAFSEILRHHPSFAKHINVIALERKQHQSSFKESDES >Mature_458_residues SILKNMIHPNSPYKRIWDLFVFLCITYFAIEVPIRLVFPHKLTVGVTHFERFIQIIFGIDLVLNFFTSILKDRLVIQNKK IVAKTYLKSWFLIDFLSAFPFDLFGGFFFEYFGVTDSLKILRLLRSVRVFELFKSLRMLALGADSEDRFKLIEVINPMTF RLIFFVYWTSLFAHWVACGWIYLTPEFLADKDIYTRYIRSLYWSVTTLTTIGYGDITPTTNPQTIYTMGVMILGVGIYGY VIGNISTLLSNLDISRVTFQEKLNTINSFIKYKKLPPQLANRIRSYYINLWENKHGIDETEIWNQLPSGIKIDVSMFLHN HLISVVPFFKNAPEELKREVVLELKPAYYMKGDVIFREGDVPHNMYFLSKGQVEVIKEKTGELLATLNSGSFFGEMSLID DSLRTATIRAGSYCDVYTLSKDAFSEILRHHPSFAKHINVIALERKQHQSSFKESDES
Specific function: Cyclic nucleotide-regulated potassium channel activated by cAMP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI4504831, Length=466, Percent_Identity=26.8240343347639, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI27886653, Length=471, Percent_Identity=26.3269639065817, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI13540549, Length=469, Percent_Identity=25.3731343283582, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI27886648, Length=470, Percent_Identity=27.6595744680851, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI116325989, Length=462, Percent_Identity=27.0562770562771, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI22024390, Length=467, Percent_Identity=27.8372591006424, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI27437001, Length=480, Percent_Identity=26.875, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI26051273, Length=472, Percent_Identity=26.0593220338983, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI4557729, Length=472, Percent_Identity=26.0593220338983, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI27886651, Length=442, Percent_Identity=25.5656108597285, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI4885407, Length=466, Percent_Identity=28.1115879828326, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI156071470, Length=462, Percent_Identity=27.2727272727273, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI4502917, Length=422, Percent_Identity=27.7251184834123, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI120433600, Length=422, Percent_Identity=27.7251184834123, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI38327037, Length=464, Percent_Identity=26.5086206896552, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI71143141, Length=425, Percent_Identity=28.2352941176471, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI217035093, Length=425, Percent_Identity=28.2352941176471, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI42718011, Length=429, Percent_Identity=27.2727272727273, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI26051271, Length=409, Percent_Identity=25.1833740831296, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI27886646, Length=418, Percent_Identity=27.7511961722488, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI27886667, Length=462, Percent_Identity=25.5411255411255, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI82617546, Length=452, Percent_Identity=24.7787610619469, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569493, Length=488, Percent_Identity=23.7704918032787, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI6912446, Length=469, Percent_Identity=24.0938166311301, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI27886665, Length=330, Percent_Identity=26.3636363636364, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI116642889, Length=424, Percent_Identity=25.7075471698113, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI114205399, Length=459, Percent_Identity=24.1830065359477, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193205559, Length=470, Percent_Identity=24.468085106383, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193205557, Length=470, Percent_Identity=24.468085106383, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17555416, Length=470, Percent_Identity=24.468085106383, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI193205554, Length=470, Percent_Identity=24.468085106383, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI193205548, Length=470, Percent_Identity=24.468085106383, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI193205550, Length=470, Percent_Identity=24.468085106383, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI193205546, Length=470, Percent_Identity=24.468085106383, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI193205552, Length=470, Percent_Identity=24.468085106383, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17556791, Length=414, Percent_Identity=27.7777777777778, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI71989969, Length=485, Percent_Identity=25.1546391752577, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71985735, Length=460, Percent_Identity=26.5217391304348, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17559702, Length=281, Percent_Identity=28.1138790035587, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193207729, Length=281, Percent_Identity=28.1138790035587, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17544220, Length=255, Percent_Identity=24.7058823529412, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17538726, Length=265, Percent_Identity=23.0188679245283, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71988286, Length=261, Percent_Identity=21.0727969348659, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330263, Length=465, Percent_Identity=29.4623655913978, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI85725018, Length=465, Percent_Identity=29.4623655913978, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI85725022, Length=464, Percent_Identity=29.7413793103448, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI221330257, Length=467, Percent_Identity=29.3361884368308, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24642070, Length=465, Percent_Identity=26.8817204301075, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI116007160, Length=465, Percent_Identity=26.6666666666667, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI221330259, Length=496, Percent_Identity=28.0241935483871, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI85725024, Length=499, Percent_Identity=27.6553106212425, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24762524, Length=471, Percent_Identity=26.3269639065817, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136454, Length=471, Percent_Identity=26.3269639065817, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136946, Length=469, Percent_Identity=25.1599147121535, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI45549131, Length=471, Percent_Identity=25.2653927813163, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI221330552, Length=408, Percent_Identity=25.7352941176471, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI45551460, Length=471, Percent_Identity=25.2653927813163, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI17137122, Length=404, Percent_Identity=27.2277227722772, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI221330550, Length=408, Percent_Identity=25.7352941176471, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI45550482, Length=241, Percent_Identity=27.3858921161826, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI221330261, Length=136, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR013099 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF07885 Ion_trans_2 [H]
EC number: NA
Molecular weight: Translated: 53342; Mature: 53211
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKNMIHPNSPYKRIWDLFVFLCITYFAIEVPIRLVFPHKLTVGVTHFERFIQIIFGI CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHHHHH DLVLNFFTSILKDRLVIQNKKIVAKTYLKSWFLIDFLSAFPFDLFGGFFFEYFGVTDSLK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH ILRLLRSVRVFELFKSLRMLALGADSEDRFKLIEVINPMTFRLIFFVYWTSLFAHWVACG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH WIYLTPEFLADKDIYTRYIRSLYWSVTTLTTIGYGDITPTTNPQTIYTMGVMILGVGIYG HHEECHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHH YVIGNISTLLSNLDISRVTFQEKLNTINSFIKYKKLPPQLANRIRSYYINLWENKHGIDE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCH TEIWNQLPSGIKIDVSMFLHNHLISVVPFFKNAPEELKREVVLELKPAYYMKGDVIFREG HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEEEECC DVPHNMYFLSKGQVEVIKEKTGELLATLNSGSFFGEMSLIDDSLRTATIRAGSYCDVYTL CCCCCEEEEECCCHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHEEEECCCCEEEEEE SKDAFSEILRHHPSFAKHINVIALERKQHQSSFKESDES CHHHHHHHHHHCCCHHHHHHHEEEHHHHHHHHHHCCCCC >Mature Secondary Structure SILKNMIHPNSPYKRIWDLFVFLCITYFAIEVPIRLVFPHKLTVGVTHFERFIQIIFGI CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHHHHH DLVLNFFTSILKDRLVIQNKKIVAKTYLKSWFLIDFLSAFPFDLFGGFFFEYFGVTDSLK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH ILRLLRSVRVFELFKSLRMLALGADSEDRFKLIEVINPMTFRLIFFVYWTSLFAHWVACG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH WIYLTPEFLADKDIYTRYIRSLYWSVTTLTTIGYGDITPTTNPQTIYTMGVMILGVGIYG HHEECHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHH YVIGNISTLLSNLDISRVTFQEKLNTINSFIKYKKLPPQLANRIRSYYINLWENKHGIDE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCH TEIWNQLPSGIKIDVSMFLHNHLISVVPFFKNAPEELKREVVLELKPAYYMKGDVIFREG HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEEEECC DVPHNMYFLSKGQVEVIKEKTGELLATLNSGSFFGEMSLIDDSLRTATIRAGSYCDVYTL CCCCCEEEEECCCHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHEEEECCCCEEEEEE SKDAFSEILRHHPSFAKHINVIALERKQHQSSFKESDES CHHHHHHHHHHCCCHHHHHHHEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA