| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221119
Identifier: 183221119
GI number: 183221119
Start: 1806146
End: 1809103
Strand: Reverse
Name: 183221119
Synonym: LEPBI_I1733
Alternate gene names: NA
Gene position: 1809103-1806146 (Counterclockwise)
Preceding gene: 183221121
Following gene: 183221118
Centisome position: 50.26
GC content: 38.95
Gene sequence:
>2958_bases GTGCAAAAATCCATTCATTTTCTCATATTATTTTGTGGTTTTCTGATCGGAATGGAAATTCTGGCACAGGATACCAATGG GTTAAAATTACTATTCCCGGACCAAACCTTACCTTCCAAAAACCAACAAGAAGAAGAGAGAAAACAAACCTCTGCACAAA TCCAAAGGGGACTTGTTCGTAAATCTGTGGATGCGATGACCGATCGAGAGGTAGAAGATAACCTCCGTAATTTAGGACTC AATCCGACGGGAACGATTTACAGCAAACGGGAACGTCTGCGAGAGGCATTGGTTCCACAAGAAGAACTTCCGTTAACTCC TGAATCCCTACTCAACTCACAACCGAAAAAAGGGCCTCCCATCCAAATTCAAAATGCGGCAGAAGGTCAATTGATGAATA TCGATAAAACAAAAGGGGGAGTCCTTGTTTTAAGAGGTAAGGTCCGAGTCAAAATCAAAGCAGGGGAACTCATCGCCGAT TCTGTTTCGATCGATGCGAATCGGCAAGAAATTTATGCGGAAGGTGGCGTAGAATACAAGGATGGAAATACCAAGGTGAT TGGAGATCGTATGATTTATGATCTTAAATTAAACCAAGGTGTTGTCTACAATTCAAAACTCAGTATGTTCCCGTCCCACT TTATTGGTCAAAAGATCAAACGTTTGGATGAAAAACGTTACCTTTTGGAAATGGGATATTTTACAGCCTGTAACGCAGAA CTTCCTCACGAATCATTCCAAGCAAAACGAATCGTGATTCATGATGACCGAACGGTTGTTGCTCAATGGGTGTCCTATAA AGTGGGTGGAACCACCTTATTCATGTTACCTTTTTTGTACAATTCAGAATCAGGGAATGGTGTCACAACACAGTTTGGTA AAAACAATACACAAGGTTGGTTTTGGCAAAACTCATACCAATGGTCTGATTCCTATCCCAATAGTTTGTTTTTAGCAAAT GGATATAAGTTTCGTTTTGATATGTACGAAAAAACAGGACAGGCTGCCCAATTGGAGATGTGGAAAGTATCTCCTATCTT AAATTATAATATCAATTTAGGATATGCCAATTATAAAAACAATGCAATCACTCCAGTCTATGAAGATCGATTTCGAAACG GTGGGATTGGGAATGTAGCTGTTACCAATAATGTTGATCGTGGGGAGATGTTTCCCAATTCCGGATTACCTTATCGTAAT ACAGGCGTTAACTATGATCCATGGTGGAAAGCGGATTTACGATTGAATGCAAAGTTCAATGATTTTTCAAAAGATTACAC TCGTAACTTTCAATTACAGTATGAAAACTATAGTAACCGATTGTTTGATTATGAATTTGGTAACAGATACCAACCATCCA ATTCATTACAGTCTTTATATACCTTTCGAGATGTAAGGTTTGGCCTCATTCGAAACTTACTGAATTGGAACTTTAATTAT ACGGAAAACCGTGGTGATCTAAGTGTTGGGATTTCCATGAGCCGAACACTGATTTATCAAATCCAAGCAAACCAATACTT TGCAGCTCAAGATACCTTACCTGCTGTCACCATTCGGAACTCAAGTAACGTTGGTAATATCCCTGGCACCACAAGTCCCA TCTATTGGGATATGTTATTCCAAACAAATATCAACAGAATCTATGGACCACCTCAACAAAAGGTAAATCCAACGACAGGA ATTGTGGACCCTAGAAGCCAATACCAAGACTTTGTTTTACGTTCACAAACCAATGTGATTGGAGAAACAGGCCTTCGTTC TCCCATTGCCATGGGAACTTATATGTCTTTCACTCCATCTGTTTATATGGGAGCGACCAAACAAACAGTGGAATTTCCTG GTTCTGGGAGTGAATTGAATGGTCCTGATCGTGATGTAAACAAAGCTTACGCAACTTTACTCAAACAACAATCATACCAA TATGTGAGACAGTCCCATACAGTTCGTATGGGTATTCCTGAAATTTTTCTATCGACCACCTACAGAAGATTAGATGCCGA TAAAGCGGAAGCCAAAGATCCAATTCTTGGTAATTTACGCCAACATGAGGCAGAATTCGCTTTGGAAAGTTACGCTTTGA ATGATTGGGATATCTCAGTTCGAACCATTCGAGACTTAAGACAGTTCTCTTCTACTTACAATCCAGGACTTACCAATATG CAACGATGGTATTATACTGTGGTTCGGATTGGAGGATTTTTCGATTTCGTTGATGGATTTTCTACGCGAAGACCAAGTTT ATTAGAAAGAAAAAGAAACTTTTATTCAGGTATTTTTATCAATAATGATTACGTTCACCACACTCCACAAAATCGTTCTT TATCTAATAATTTAACAGTATCATATAAAATGGGTGGGTTTTCATGGCCCATCATTCGTGCCTTTCGTAGTTTAGAAATT GGATCCACATGGTATCATGTTTATAAGGATAGTTTTTTGGATAGTTACCGTTTCTTTTTTAAAACGGATGTGAAAGTCAC AAGGTATACAGGCGTTGAACTGGAGTTAGACTCAAGAGTCACAGAACCTTGGAGATTAACAGCATTAGCGCAAGGTCAAT TTTATGCCTTGAATACAAGTCCCGAACTATATACGTCTCAAACAGGTACGAATTATGACCAAACCACCATTTGGGAAGAT TTAGCATCAGGAACTGGTGCCAACGGTCAAACGGAAAGGCAAAAAACGGTTTTTAATATCAATCGATTTATGATGACCTT TAAAATGGACCTACATAACTGGGAATACCGATTGGGATATAGCATGAATCTTCGTGCCTTACCTGGTGGACTTGCTCTCA ATAATCAATTAACGTTTTATGACCAATCCGTTTATTTATCCGTTAATTTAACGAACTTCAGTTTTGGAGATTCCGCATCC GCACAAGCAACAAGGGTAAGATTGTATCGATTCAGAAAACGTCCATTAGATGGAACAACAACCGATTTATCGGAATGA
Upstream 100 bases:
>100_bases TTCAAAGAAATTACAACTTTCCGCCTCGAATTTCAACCTGGTTTTCCATTGATTTTTTCGATAGGGGTAAAACTCTCGTT CTATACTTCCAAAGCCCGCT
Downstream 100 bases:
>100_bases GCATAAGAAAACAATGTTAAAAGAAAGAAGTCAATCCTTCAAATTATTATTCCTAGTAACTGATTTTTTTATTGGTCTTA CGAGTTTTTTAACAGCGTAT
Product: putative cell envelope biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 985; Mature: 985
Protein sequence:
>985_residues MQKSIHFLILFCGFLIGMEILAQDTNGLKLLFPDQTLPSKNQQEEERKQTSAQIQRGLVRKSVDAMTDREVEDNLRNLGL NPTGTIYSKRERLREALVPQEELPLTPESLLNSQPKKGPPIQIQNAAEGQLMNIDKTKGGVLVLRGKVRVKIKAGELIAD SVSIDANRQEIYAEGGVEYKDGNTKVIGDRMIYDLKLNQGVVYNSKLSMFPSHFIGQKIKRLDEKRYLLEMGYFTACNAE LPHESFQAKRIVIHDDRTVVAQWVSYKVGGTTLFMLPFLYNSESGNGVTTQFGKNNTQGWFWQNSYQWSDSYPNSLFLAN GYKFRFDMYEKTGQAAQLEMWKVSPILNYNINLGYANYKNNAITPVYEDRFRNGGIGNVAVTNNVDRGEMFPNSGLPYRN TGVNYDPWWKADLRLNAKFNDFSKDYTRNFQLQYENYSNRLFDYEFGNRYQPSNSLQSLYTFRDVRFGLIRNLLNWNFNY TENRGDLSVGISMSRTLIYQIQANQYFAAQDTLPAVTIRNSSNVGNIPGTTSPIYWDMLFQTNINRIYGPPQQKVNPTTG IVDPRSQYQDFVLRSQTNVIGETGLRSPIAMGTYMSFTPSVYMGATKQTVEFPGSGSELNGPDRDVNKAYATLLKQQSYQ YVRQSHTVRMGIPEIFLSTTYRRLDADKAEAKDPILGNLRQHEAEFALESYALNDWDISVRTIRDLRQFSSTYNPGLTNM QRWYYTVVRIGGFFDFVDGFSTRRPSLLERKRNFYSGIFINNDYVHHTPQNRSLSNNLTVSYKMGGFSWPIIRAFRSLEI GSTWYHVYKDSFLDSYRFFFKTDVKVTRYTGVELELDSRVTEPWRLTALAQGQFYALNTSPELYTSQTGTNYDQTTIWED LASGTGANGQTERQKTVFNINRFMMTFKMDLHNWEYRLGYSMNLRALPGGLALNNQLTFYDQSVYLSVNLTNFSFGDSAS AQATRVRLYRFRKRPLDGTTTDLSE
Sequences:
>Translated_985_residues MQKSIHFLILFCGFLIGMEILAQDTNGLKLLFPDQTLPSKNQQEEERKQTSAQIQRGLVRKSVDAMTDREVEDNLRNLGL NPTGTIYSKRERLREALVPQEELPLTPESLLNSQPKKGPPIQIQNAAEGQLMNIDKTKGGVLVLRGKVRVKIKAGELIAD SVSIDANRQEIYAEGGVEYKDGNTKVIGDRMIYDLKLNQGVVYNSKLSMFPSHFIGQKIKRLDEKRYLLEMGYFTACNAE LPHESFQAKRIVIHDDRTVVAQWVSYKVGGTTLFMLPFLYNSESGNGVTTQFGKNNTQGWFWQNSYQWSDSYPNSLFLAN GYKFRFDMYEKTGQAAQLEMWKVSPILNYNINLGYANYKNNAITPVYEDRFRNGGIGNVAVTNNVDRGEMFPNSGLPYRN TGVNYDPWWKADLRLNAKFNDFSKDYTRNFQLQYENYSNRLFDYEFGNRYQPSNSLQSLYTFRDVRFGLIRNLLNWNFNY TENRGDLSVGISMSRTLIYQIQANQYFAAQDTLPAVTIRNSSNVGNIPGTTSPIYWDMLFQTNINRIYGPPQQKVNPTTG IVDPRSQYQDFVLRSQTNVIGETGLRSPIAMGTYMSFTPSVYMGATKQTVEFPGSGSELNGPDRDVNKAYATLLKQQSYQ YVRQSHTVRMGIPEIFLSTTYRRLDADKAEAKDPILGNLRQHEAEFALESYALNDWDISVRTIRDLRQFSSTYNPGLTNM QRWYYTVVRIGGFFDFVDGFSTRRPSLLERKRNFYSGIFINNDYVHHTPQNRSLSNNLTVSYKMGGFSWPIIRAFRSLEI GSTWYHVYKDSFLDSYRFFFKTDVKVTRYTGVELELDSRVTEPWRLTALAQGQFYALNTSPELYTSQTGTNYDQTTIWED LASGTGANGQTERQKTVFNINRFMMTFKMDLHNWEYRLGYSMNLRALPGGLALNNQLTFYDQSVYLSVNLTNFSFGDSAS AQATRVRLYRFRKRPLDGTTTDLSE >Mature_985_residues MQKSIHFLILFCGFLIGMEILAQDTNGLKLLFPDQTLPSKNQQEEERKQTSAQIQRGLVRKSVDAMTDREVEDNLRNLGL NPTGTIYSKRERLREALVPQEELPLTPESLLNSQPKKGPPIQIQNAAEGQLMNIDKTKGGVLVLRGKVRVKIKAGELIAD SVSIDANRQEIYAEGGVEYKDGNTKVIGDRMIYDLKLNQGVVYNSKLSMFPSHFIGQKIKRLDEKRYLLEMGYFTACNAE LPHESFQAKRIVIHDDRTVVAQWVSYKVGGTTLFMLPFLYNSESGNGVTTQFGKNNTQGWFWQNSYQWSDSYPNSLFLAN GYKFRFDMYEKTGQAAQLEMWKVSPILNYNINLGYANYKNNAITPVYEDRFRNGGIGNVAVTNNVDRGEMFPNSGLPYRN TGVNYDPWWKADLRLNAKFNDFSKDYTRNFQLQYENYSNRLFDYEFGNRYQPSNSLQSLYTFRDVRFGLIRNLLNWNFNY TENRGDLSVGISMSRTLIYQIQANQYFAAQDTLPAVTIRNSSNVGNIPGTTSPIYWDMLFQTNINRIYGPPQQKVNPTTG IVDPRSQYQDFVLRSQTNVIGETGLRSPIAMGTYMSFTPSVYMGATKQTVEFPGSGSELNGPDRDVNKAYATLLKQQSYQ YVRQSHTVRMGIPEIFLSTTYRRLDADKAEAKDPILGNLRQHEAEFALESYALNDWDISVRTIRDLRQFSSTYNPGLTNM QRWYYTVVRIGGFFDFVDGFSTRRPSLLERKRNFYSGIFINNDYVHHTPQNRSLSNNLTVSYKMGGFSWPIIRAFRSLEI GSTWYHVYKDSFLDSYRFFFKTDVKVTRYTGVELELDSRVTEPWRLTALAQGQFYALNTSPELYTSQTGTNYDQTTIWED LASGTGANGQTERQKTVFNINRFMMTFKMDLHNWEYRLGYSMNLRALPGGLALNNQLTFYDQSVYLSVNLTNFSFGDSAS AQATRVRLYRFRKRPLDGTTTDLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 113198; Mature: 113198
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSIHFLILFCGFLIGMEILAQDTNGLKLLFPDQTLPSKNQQEEERKQTSAQIQRGLVR CCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH KSVDAMTDREVEDNLRNLGLNPTGTIYSKRERLREALVPQEELPLTPESLLNSQPKKGPP HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCCCC IQIQNAAEGQLMNIDKTKGGVLVLRGKVRVKIKAGELIADSVSIDANRQEIYAEGGVEYK EEEECCCCCEEEEEECCCCCEEEEECEEEEEEECCCEEECCEECCCCCCEEEECCCEEEE DGNTKVIGDRMIYDLKLNQGVVYNSKLSMFPSHFIGQKIKRLDEKRYLLEMGYFTACNAE CCCEEEEECEEEEEEEECCCEEECCHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC LPHESFQAKRIVIHDDRTVVAQWVSYKVGGTTLFMLPFLYNSESGNGVTTQFGKNNTQGW CCCCCCCCCEEEEECCCHHEEHHHEEECCCEEEEEEEEEEECCCCCCEEEECCCCCCCCE FWQNSYQWSDSYPNSLFLANGYKFRFDMYEKTGQAAQLEMWKVSPILNYNINLGYANYKN EECCEEECCCCCCCEEEEECCEEEEEEHHHCCCCEEEEEEEEECEEEEEEEEEEEEECCC NAITPVYEDRFRNGGIGNVAVTNNVDRGEMFPNSGLPYRNTGVNYDPWWKADLRLNAKFN CCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC DFSKDYTRNFQLQYENYSNRLFDYEFGNRYQPSNSLQSLYTFRDVRFGLIRNLLNWNFNY CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TENRGDLSVGISMSRTLIYQIQANQYFAAQDTLPAVTIRNSSNVGNIPGTTSPIYWDMLF ECCCCCEEEEEEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEE QTNINRIYGPPQQKVNPTTGIVDPRSQYQDFVLRSQTNVIGETGLRSPIAMGTYMSFTPS ECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCEECCEEECCCC VYMGATKQTVEFPGSGSELNGPDRDVNKAYATLLKQQSYQYVRQSHTVRMGIPEIFLSTT EEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH YRRLDADKAEAKDPILGNLRQHEAEFALESYALNDWDISVRTIRDLRQFSSTYNPGLTNM HHHHCCCHHHCCCCHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH QRWYYTVVRIGGFFDFVDGFSTRRPSLLERKRNFYSGIFINNDYVHHTPQNRSLSNNLTV HHHHEEEHHHCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEECCEEEECCCCCCCCCCEEE SYKMGGFSWPIIRAFRSLEIGSTWYHVYKDSFLDSYRFFFKTDVKVTRYTGVELELDSRV EEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEECEEEEECCCC TEPWRLTALAQGQFYALNTSPELYTSQTGTNYDQTTIWEDLASGTGANGQTERQKTVFNI CCCEEEEEEECCEEEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH NRFMMTFKMDLHNWEYRLGYSMNLRALPGGLALNNQLTFYDQSVYLSVNLTNFSFGDSAS EEEEEEEEEECCCCEEEECEEEEEEECCCCEEECCEEEEEECEEEEEEEEEEECCCCCCC AQATRVRLYRFRKRPLDGTTTDLSE CHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQKSIHFLILFCGFLIGMEILAQDTNGLKLLFPDQTLPSKNQQEEERKQTSAQIQRGLVR CCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH KSVDAMTDREVEDNLRNLGLNPTGTIYSKRERLREALVPQEELPLTPESLLNSQPKKGPP HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCCCC IQIQNAAEGQLMNIDKTKGGVLVLRGKVRVKIKAGELIADSVSIDANRQEIYAEGGVEYK EEEECCCCCEEEEEECCCCCEEEEECEEEEEEECCCEEECCEECCCCCCEEEECCCEEEE DGNTKVIGDRMIYDLKLNQGVVYNSKLSMFPSHFIGQKIKRLDEKRYLLEMGYFTACNAE CCCEEEEECEEEEEEEECCCEEECCHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC LPHESFQAKRIVIHDDRTVVAQWVSYKVGGTTLFMLPFLYNSESGNGVTTQFGKNNTQGW CCCCCCCCCEEEEECCCHHEEHHHEEECCCEEEEEEEEEEECCCCCCEEEECCCCCCCCE FWQNSYQWSDSYPNSLFLANGYKFRFDMYEKTGQAAQLEMWKVSPILNYNINLGYANYKN EECCEEECCCCCCCEEEEECCEEEEEEHHHCCCCEEEEEEEEECEEEEEEEEEEEEECCC NAITPVYEDRFRNGGIGNVAVTNNVDRGEMFPNSGLPYRNTGVNYDPWWKADLRLNAKFN CCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC DFSKDYTRNFQLQYENYSNRLFDYEFGNRYQPSNSLQSLYTFRDVRFGLIRNLLNWNFNY CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TENRGDLSVGISMSRTLIYQIQANQYFAAQDTLPAVTIRNSSNVGNIPGTTSPIYWDMLF ECCCCCEEEEEEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEE QTNINRIYGPPQQKVNPTTGIVDPRSQYQDFVLRSQTNVIGETGLRSPIAMGTYMSFTPS ECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCEECCEEECCCC VYMGATKQTVEFPGSGSELNGPDRDVNKAYATLLKQQSYQYVRQSHTVRMGIPEIFLSTT EEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH YRRLDADKAEAKDPILGNLRQHEAEFALESYALNDWDISVRTIRDLRQFSSTYNPGLTNM HHHHCCCHHHCCCCHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH QRWYYTVVRIGGFFDFVDGFSTRRPSLLERKRNFYSGIFINNDYVHHTPQNRSLSNNLTV HHHHEEEHHHCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEECCEEEECCCCCCCCCCEEE SYKMGGFSWPIIRAFRSLEIGSTWYHVYKDSFLDSYRFFFKTDVKVTRYTGVELELDSRV EEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEECEEEEECCCC TEPWRLTALAQGQFYALNTSPELYTSQTGTNYDQTTIWEDLASGTGANGQTERQKTVFNI CCCEEEEEEECCEEEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH NRFMMTFKMDLHNWEYRLGYSMNLRALPGGLALNNQLTFYDQSVYLSVNLTNFSFGDSAS EEEEEEEEEECCCCEEEECEEEEEEECCCCEEECCEEEEEECEEEEEEEEEEECCCCCCC AQATRVRLYRFRKRPLDGTTTDLSE CHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA