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The map label for this gene is pdtaR [H]

Identifier: 183221121

GI number: 183221121

Start: 1809636

End: 1810748

Strand: Reverse

Name: pdtaR [H]

Synonym: LEPBI_I1735

Alternate gene names: 183221121

Gene position: 1810748-1809636 (Counterclockwise)

Preceding gene: 183221124

Following gene: 183221119

Centisome position: 50.3

GC content: 38.72

Gene sequence:

>1113_bases
GTGGACTGGTTTTGTAAAACGATGACATCAATTGTGGGAAATGAAAAAGAAACGGATGTAAAAAAGATCCTCGTTGTGGA
AGACGAGAGGATCATTGCGATCAATATTTGTTCTACCTTAAAACAATATGGATACAATGCGATTTATGTATCCGAAGCCA
ATGATGCAATTGAACAGATTGAATCAGAACACTTTGATTTAGTTTTAATGGATATCATGTTAAATGGTCCGATGGATGGC
ATTGAAATCGCAAGTAAGATCAAACGAACCAAGGAAATTCCTGTCATTTATCTCACTGCCTATTCAGATGAAGCAACCAT
CAATCGCGCCAAAACGACGGAACCTTTCGGATATCTAATCAAACCATTCAATAGCAGGGATCTTTATATTTCGGTGGAAA
TGGCAATTTACAAATCCCAAGTGCAAAAACACATTCGAGTGGTGGAGAGTCGTTTGGCTGAAAATCAAAAATGGGAAACG
ATAGCCCTTGTTGCTTCGGGGATCTCTCATGAAATTAACAATCCACTCACTTCGATTCTCAATTTAGCAGATCTCATAGC
ATTAGAAGCAAAAAAAAACTCGAATCCTTCACTCAAAGAAAAGGCAGATAAAATCAGCGAAGAATCAGAACGAATCGCAA
AGATTGTGAAAAACCTAGTTTCTTACTCCCAATCTACGAGTTCCCAATGGACCTATTCAAATTTAGTGAGCATCTTAAAT
GACACACGATCATTCCTACACCAATATTTTTTAAAGGAAGGGATCCAATGTGAATTGGAAATGGGAGATGTGCCTCATGT
TTATTGCCAACCTCAAAAAATCAAACAAGTCCTTCTCAACTTGATGCAAGATGCAAGACTTCGTGTGAATACAAGGGAAG
ATTCCATAGGACGAAAGATAGCTGTTTCAATGTCAGTCGTGGAAAGAGATGGGAATGAATTTGTGCAGATCCAAATCAAA
GACAATGGAGCTGAAGATTTGATGATGGGAATCTCCCAAATGAACTCACTAGATGTCACAAGGAGTATCATCGCCGAACA
CAAAGGTAATTTGATACGAGAAGAACCAACGTCTGCTTGGGTCTTCACTCTACCGATTGTCAAACCTGTTTGA

Upstream 100 bases:

>100_bases
AAAACCACCTGCTTTTGGGCTTCATTTAAATCCGTTTCCACAATACAGAGATTTGTTGTCTGGATTCTGTTGACAAACGG
AAATTATTCTGTTTGATTGT

Downstream 100 bases:

>100_bases
TCGGAACTTAATGATTTCCCGATAAGATTGGTTTTTTTTCCAAACTTGGGCGTTCTAATAACTTAAAAAATAAATCGATT
CGATTGGAATGTAACAACCA

Product: putative response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDWFCKTMTSIVGNEKETDVKKILVVEDERIIAINICSTLKQYGYNAIYVSEANDAIEQIESEHFDLVLMDIMLNGPMDG
IEIASKIKRTKEIPVIYLTAYSDEATINRAKTTEPFGYLIKPFNSRDLYISVEMAIYKSQVQKHIRVVESRLAENQKWET
IALVASGISHEINNPLTSILNLADLIALEAKKNSNPSLKEKADKISEESERIAKIVKNLVSYSQSTSSQWTYSNLVSILN
DTRSFLHQYFLKEGIQCELEMGDVPHVYCQPQKIKQVLLNLMQDARLRVNTREDSIGRKIAVSMSVVERDGNEFVQIQIK
DNGAEDLMMGISQMNSLDVTRSIIAEHKGNLIREEPTSAWVFTLPIVKPV

Sequences:

>Translated_370_residues
MDWFCKTMTSIVGNEKETDVKKILVVEDERIIAINICSTLKQYGYNAIYVSEANDAIEQIESEHFDLVLMDIMLNGPMDG
IEIASKIKRTKEIPVIYLTAYSDEATINRAKTTEPFGYLIKPFNSRDLYISVEMAIYKSQVQKHIRVVESRLAENQKWET
IALVASGISHEINNPLTSILNLADLIALEAKKNSNPSLKEKADKISEESERIAKIVKNLVSYSQSTSSQWTYSNLVSILN
DTRSFLHQYFLKEGIQCELEMGDVPHVYCQPQKIKQVLLNLMQDARLRVNTREDSIGRKIAVSMSVVERDGNEFVQIQIK
DNGAEDLMMGISQMNSLDVTRSIIAEHKGNLIREEPTSAWVFTLPIVKPV
>Mature_370_residues
MDWFCKTMTSIVGNEKETDVKKILVVEDERIIAINICSTLKQYGYNAIYVSEANDAIEQIESEHFDLVLMDIMLNGPMDG
IEIASKIKRTKEIPVIYLTAYSDEATINRAKTTEPFGYLIKPFNSRDLYISVEMAIYKSQVQKHIRVVESRLAENQKWET
IALVASGISHEINNPLTSILNLADLIALEAKKNSNPSLKEKADKISEESERIAKIVKNLVSYSQSTSSQWTYSNLVSILN
DTRSFLHQYFLKEGIQCELEMGDVPHVYCQPQKIKQVLLNLMQDARLRVNTREDSIGRKIAVSMSVVERDGNEFVQIQIK
DNGAEDLMMGISQMNSLDVTRSIIAEHKGNLIREEPTSAWVFTLPIVKPV

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=33.0578512396694, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=35.2941176470588, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=146, Percent_Identity=31.5068493150685, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 41969; Mature: 41969

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWFCKTMTSIVGNEKETDVKKILVVEDERIIAINICSTLKQYGYNAIYVSEANDAIEQI
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEHHHHHHHCCCCEEEEECCHHHHHHH
ESEHFDLVLMDIMLNGPMDGIEIASKIKRTKEIPVIYLTAYSDEATINRAKTTEPFGYLI
HHCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
KPFNSRDLYISVEMAIYKSQVQKHIRVVESRLAENQKWETIALVASGISHEINNPLTSIL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
NLADLIALEAKKNSNPSLKEKADKISEESERIAKIVKNLVSYSQSTSSQWTYSNLVSILN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DTRSFLHQYFLKEGIQCELEMGDVPHVYCQPQKIKQVLLNLMQDARLRVNTREDSIGRKI
HHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHCCCEEEECCCHHCCCEE
AVSMSVVERDGNEFVQIQIKDNGAEDLMMGISQMNSLDVTRSIIAEHKGNLIREEPTSAW
EEEHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEE
VFTLPIVKPV
EEEECCCCCC
>Mature Secondary Structure
MDWFCKTMTSIVGNEKETDVKKILVVEDERIIAINICSTLKQYGYNAIYVSEANDAIEQI
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEHHHHHHHCCCCEEEEECCHHHHHHH
ESEHFDLVLMDIMLNGPMDGIEIASKIKRTKEIPVIYLTAYSDEATINRAKTTEPFGYLI
HHCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
KPFNSRDLYISVEMAIYKSQVQKHIRVVESRLAENQKWETIALVASGISHEINNPLTSIL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
NLADLIALEAKKNSNPSLKEKADKISEESERIAKIVKNLVSYSQSTSSQWTYSNLVSILN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DTRSFLHQYFLKEGIQCELEMGDVPHVYCQPQKIKQVLLNLMQDARLRVNTREDSIGRKI
HHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHCCCEEEECCCHHCCCEE
AVSMSVVERDGNEFVQIQIKDNGAEDLMMGISQMNSLDVTRSIIAEHKGNLIREEPTSAW
EEEHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEE
VFTLPIVKPV
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]