| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is wcaJ [C]
Identifier: 183221118
GI number: 183221118
Start: 1804732
End: 1806132
Strand: Reverse
Name: wcaJ [C]
Synonym: LEPBI_I1732
Alternate gene names: 183221118
Gene position: 1806132-1804732 (Counterclockwise)
Preceding gene: 183221119
Following gene: 183221117
Centisome position: 50.17
GC content: 34.76
Gene sequence:
>1401_bases ATGTTAAAAGAAAGAAGTCAATCCTTCAAATTATTATTCCTAGTAACTGATTTTTTTATTGGTCTTACGAGTTTTTTAAC AGCGTATATCTTTCGTTATTATTTATCTCCAGATTCTAGTTTTCAAATCCAAACAATCGATCCGCTCAATTATTTGATCC TTGGAATTGTCCTTGGGTTTTCGCAAGTGTTCTCCTTTTTATCCATTGATTTATACCATCCGAGGAGAGGACTGTCGTTT TCAGATGAACTGTTTGCCATCATTTCAGGTGTAATCTTAAACCTTTTGGTGGTTCTCTCACTCCTATTTTTCTTTCGTGG AGAAAGTTTTTCTAGGCTTGTCATTGGATATTTTGCAATTTGTACGATTATCCTCACTTCCTTTTCTCATTTTTTATTAC GTGCACTCATGCAGTATCTAAGAAGTAAGGGATATAATTTAAAATCAGTTTTGATCATTGGAACTGGAAAATCTGCAATT AATTTTTCAAAAACATTACAAAAACACTCTATCTACGGTTATACGGTCAAAGGATTTGTTTCTGGTAAAAAAAACTTATC TCCCAAATCAGTTCAAACAGTGACCACCACATCCAAATTAGAAAATTATGTTGAAAACAACCTTATTGATCTAATTGTTT ACGCTTTGTCACATGAGGAAGGAGACTCACTGAAAGAGGTCATCGATATCGCAGACTTTCACGGTATTGATTTAAAAGTA ATTCCTAGTTATGAAGAGATTGTCACAGCAAAAGGAAGAGTGGAAGTATTAGATGGGATTCCAATCATTTCGATCCGAAA CATTCCTCTCCGATTGGGTTACAATTTAGTTTTAAAAAGAAGTTTTGATATTTTATTTTCCTTATTTTTTATTTTACTCT TCAGTCCTTTTTATATACTCATTGCCTTACTTGTAAAATTAACAAGCAAAGGACCCGTTTTTTACAAACAAGAAAGAGTT GGATTGGATAACAAAGTATTCGGAATGATTAAGTTTCGATCTATGGTTGTGCAAGCAAAAGAAAAATCTGATACATTATG GACAGTGAAAGACGATCCTAGAGTGACTTCAATAGGTGCCATCTTACGAAAGTTATCCCTCGACGAGACTCCCCAGTTTT TTAATGTATTACTCGGAGATATGTCTGTGGTCGGACCAAGACCAGAAAGACCATTTTATGTAGAAAAGTTTCGGAATGAA CACCACCAATACATGCGTAGACATGCTGCCAAAGCCGGAATTACAGGATGGGCGCAGGTGCAAGGTTTTCGTGGTGATAC TTCCATAGAGAAACGAATCGAAGCAGATATATTTTATATAGAAAACTGGTCCTTATTACTCGATATTAAGATCATTTTAC TAACCCCACTCAAAGCGATTATTGATAGGAATGCCTATTAA
Upstream 100 bases:
>100_bases TCCGCATCCGCACAAGCAACAAGGGTAAGATTGTATCGATTCAGAAAACGTCCATTAGATGGAACAACAACCGATTTATC GGAATGAGCATAAGAAAACA
Downstream 100 bases:
>100_bases GGAAACCATATGGATGAAAAAGAATTAAAAAACATTGCGAATCTAGCAAAATTAAACATCGAAGAAAACGAGATTTCCGG GATGTTAAGTGACTTCTCTA
Product: putative undecaprenyl-phosphate galactose phosphotransferase
Products: NA
Alternate protein names: ORF14 [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MLKERSQSFKLLFLVTDFFIGLTSFLTAYIFRYYLSPDSSFQIQTIDPLNYLILGIVLGFSQVFSFLSIDLYHPRRGLSF SDELFAIISGVILNLLVVLSLLFFFRGESFSRLVIGYFAICTIILTSFSHFLLRALMQYLRSKGYNLKSVLIIGTGKSAI NFSKTLQKHSIYGYTVKGFVSGKKNLSPKSVQTVTTTSKLENYVENNLIDLIVYALSHEEGDSLKEVIDIADFHGIDLKV IPSYEEIVTAKGRVEVLDGIPIISIRNIPLRLGYNLVLKRSFDILFSLFFILLFSPFYILIALLVKLTSKGPVFYKQERV GLDNKVFGMIKFRSMVVQAKEKSDTLWTVKDDPRVTSIGAILRKLSLDETPQFFNVLLGDMSVVGPRPERPFYVEKFRNE HHQYMRRHAAKAGITGWAQVQGFRGDTSIEKRIEADIFYIENWSLLLDIKIILLTPLKAIIDRNAY
Sequences:
>Translated_466_residues MLKERSQSFKLLFLVTDFFIGLTSFLTAYIFRYYLSPDSSFQIQTIDPLNYLILGIVLGFSQVFSFLSIDLYHPRRGLSF SDELFAIISGVILNLLVVLSLLFFFRGESFSRLVIGYFAICTIILTSFSHFLLRALMQYLRSKGYNLKSVLIIGTGKSAI NFSKTLQKHSIYGYTVKGFVSGKKNLSPKSVQTVTTTSKLENYVENNLIDLIVYALSHEEGDSLKEVIDIADFHGIDLKV IPSYEEIVTAKGRVEVLDGIPIISIRNIPLRLGYNLVLKRSFDILFSLFFILLFSPFYILIALLVKLTSKGPVFYKQERV GLDNKVFGMIKFRSMVVQAKEKSDTLWTVKDDPRVTSIGAILRKLSLDETPQFFNVLLGDMSVVGPRPERPFYVEKFRNE HHQYMRRHAAKAGITGWAQVQGFRGDTSIEKRIEADIFYIENWSLLLDIKIILLTPLKAIIDRNAY >Mature_466_residues MLKERSQSFKLLFLVTDFFIGLTSFLTAYIFRYYLSPDSSFQIQTIDPLNYLILGIVLGFSQVFSFLSIDLYHPRRGLSF SDELFAIISGVILNLLVVLSLLFFFRGESFSRLVIGYFAICTIILTSFSHFLLRALMQYLRSKGYNLKSVLIIGTGKSAI NFSKTLQKHSIYGYTVKGFVSGKKNLSPKSVQTVTTTSKLENYVENNLIDLIVYALSHEEGDSLKEVIDIADFHGIDLKV IPSYEEIVTAKGRVEVLDGIPIISIRNIPLRLGYNLVLKRSFDILFSLFFILLFSPFYILIALLVKLTSKGPVFYKQERV GLDNKVFGMIKFRSMVVQAKEKSDTLWTVKDDPRVTSIGAILRKLSLDETPQFFNVLLGDMSVVGPRPERPFYVEKFRNE HHQYMRRHAAKAGITGWAQVQGFRGDTSIEKRIEADIFYIENWSLLLDIKIILLTPLKAIIDRNAY
Specific function: May function as a glycosyltransferase which is essential for the synthesis of the K2 capsular polysaccharide [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=414, Percent_Identity=33.8164251207729, Blast_Score=222, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 53206; Mature: 53206
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKERSQSFKLLFLVTDFFIGLTSFLTAYIFRYYLSPDSSFQIQTIDPLNYLILGIVLGF CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHH SQVFSFLSIDLYHPRRGLSFSDELFAIISGVILNLLVVLSLLFFFRGESFSRLVIGYFAI HHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CTIILTSFSHFLLRALMQYLRSKGYNLKSVLIIGTGKSAINFSKTLQKHSIYGYTVKGFV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEE SGKKNLSPKSVQTVTTTSKLENYVENNLIDLIVYALSHEEGDSLKEVIDIADFHGIDLKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEE IPSYEEIVTAKGRVEVLDGIPIISIRNIPLRLGYNLVLKRSFDILFSLFFILLFSPFYIL ECCHHHHHCCCCCEEEECCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IALLVKLTSKGPVFYKQERVGLDNKVFGMIKFRSMVVQAKEKSDTLWTVKDDPRVTSIGA HHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH ILRKLSLDETPQFFNVLLGDMSVVGPRPERPFYVEKFRNEHHQYMRRHAAKAGITGWAQV HHHHHCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHE QGFRGDTSIEKRIEADIFYIENWSLLLDIKIILLTPLKAIIDRNAY ECCCCCCHHHHHHCCEEEEEECCEEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLKERSQSFKLLFLVTDFFIGLTSFLTAYIFRYYLSPDSSFQIQTIDPLNYLILGIVLGF CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHH SQVFSFLSIDLYHPRRGLSFSDELFAIISGVILNLLVVLSLLFFFRGESFSRLVIGYFAI HHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CTIILTSFSHFLLRALMQYLRSKGYNLKSVLIIGTGKSAINFSKTLQKHSIYGYTVKGFV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEE SGKKNLSPKSVQTVTTTSKLENYVENNLIDLIVYALSHEEGDSLKEVIDIADFHGIDLKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEE IPSYEEIVTAKGRVEVLDGIPIISIRNIPLRLGYNLVLKRSFDILFSLFFILLFSPFYIL ECCHHHHHCCCCCEEEECCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IALLVKLTSKGPVFYKQERVGLDNKVFGMIKFRSMVVQAKEKSDTLWTVKDDPRVTSIGA HHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH ILRKLSLDETPQFFNVLLGDMSVVGPRPERPFYVEKFRNEHHQYMRRHAAKAGITGWAQV HHHHHCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHE QGFRGDTSIEKRIEADIFYIENWSLLLDIKIILLTPLKAIIDRNAY ECCCCCCHHHHHHCCEEEEEECCEEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]