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The map label for this gene is rimP

Identifier: 183220910

GI number: 183220910

Start: 1587782

End: 1588270

Strand: Direct

Name: rimP

Synonym: LEPBI_I1523

Alternate gene names: 183220910

Gene position: 1587782-1588270 (Clockwise)

Preceding gene: 183220906

Following gene: 183220911

Centisome position: 44.11

GC content: 44.17

Gene sequence:

>489_bases
TTGGTATATACCGAGGAAAACATCAGAGAACTGATTTTACGAGTTCTCGCTCCACCTCTAGCGCTTTTTTCGCTCCAAGT
ACAGAATCGGAAAAACCACGCCCTCATTGAGATAGAACTGGATCATCTCACAGACAAAACTGGCTCTGCTAGTTTGGAAG
ACTGTGAGACTGTATCTAGGAGACTCAAAGAGGAGCTGGACCAATGGGGAGAGGAATTTGATTTCACTCTCCAAGTCTCC
TCCGCGGGAGCAGAACGTGTTTTACGTTTGCCGGAGGATTTAATTCGTTTCCAAGGACTTTTGGTAAAACTAGAAGTGCC
GCTGGAATCAGGGAAATGGGACAAACGATTGTATCGTTTGGGACCGGTTTCGGGGGATTCCGTTGAGCTTACGCTTTACG
ATCGTAAAACTCGACACAAAAAGAACCAAAAATCGGTATCTATGCCCATCGCAGAAATACGAAAGGGAAATTTGTATTTA
GAAATTTAA

Upstream 100 bases:

>100_bases
CAGGACAACTCGCTTTTCCTAGCCTGTCAGGAGACGTGCTAAATTTTAGCATGAGCTTTGGTCTCTTATACAGATTCCGA
TTGGAATCTTTGGATATGGT

Downstream 100 bases:

>100_bases
GACTATGGCGACAAAACAAGCAACGAAAGAAACTGGGCTATTCGAAGCCATCCAACAATTCTGTCAGGACAAATCCCTTG
ACAGAGAACTCGTACTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVYTEENIRELILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQWGEEFDFTLQVS
SAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKRLYRLGPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYL
EI

Sequences:

>Translated_162_residues
MVYTEENIRELILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQWGEEFDFTLQVS
SAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKRLYRLGPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYL
EI
>Mature_162_residues
MVYTEENIRELILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQWGEEFDFTLQVS
SAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKRLYRLGPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYL
EI

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_LEPBA (B0SH16)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001962561.1
- ProteinModelPortal:   B0SH16
- GeneID:   6388682
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_1470
- HOGENOM:   HBG527811
- ProtClustDB:   PRK14635
- BioCyc:   LBIF355278:LBF_1470-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18689; Mature: 18689

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYTEENIRELILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSR
CCCCHHHHHHHHHHHHCCHHHHEEEEECCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHH
RLKEELDQWGEEFDFTLQVSSAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKRLYRL
HHHHHHHHHCCCCEEEEEECCCCHHHHHHCHHHHHHHCCEEEEEEECCCCCCHHHHHEEE
GPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYLEI
CCCCCCEEEEEEECCHHHHHCCCHHHCCCHHHHCCCCEEEEC
>Mature Secondary Structure
MVYTEENIRELILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSR
CCCCHHHHHHHHHHHHCCHHHHEEEEECCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHH
RLKEELDQWGEEFDFTLQVSSAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKRLYRL
HHHHHHHHHCCCCEEEEEECCCCHHHHHHCHHHHHHHCCEEEEEEECCCCCCHHHHHEEE
GPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYLEI
CCCCCCEEEEEEECCHHHHHCCCHHHCCCHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA