Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220906
Identifier: 183220906
GI number: 183220906
Start: 1584003
End: 1584422
Strand: Direct
Name: 183220906
Synonym: LEPBI_I1519
Alternate gene names: NA
Gene position: 1584003-1584422 (Clockwise)
Preceding gene: 183220905
Following gene: 183220910
Centisome position: 44.0
GC content: 43.1
Gene sequence:
>420_bases ATGGCAAACCTAACAACAAAATTAATAGAAGCTCAAAAATTGGCGATGTCGCTACGTCCGAAGGTAGGTGGATTTCTAGT CCTTGCAGAAGTTTTGAGATTAGCGGGTGTTACGAGGAATCGTTGGTCCTTACCTTCTTGCCAGTCGGTTTACCATATGA AGGAAGGATCTGTGGTCCAACAAGGGAACCCAATTGTGATGGGAATCCATGAGATCCCAAAATTTGATTCTGAAGGTTTG ATCAGAGCACTCCGCACAGACCAAGAAGGCAAAAGTTCATTTCCTGAATTCCTCAAATCAGCATGGGAGGCAGGTGTGAT CGGTTACGATGTTGATTTCGAGAGTCGTAAGGTTGTTTACTATGGAGTGAATGATGAAAGTTATATGGAAGAATACCCTG CCGTGAATCTAGAAGTTTGA
Upstream 100 bases:
>100_bases GTACTTTCACAAAAAGAAAGGGAAGAGCTTCGCAAGATTCTTTCCAAACTAACAACAGCACACAAGCTCAATTTAACCCC AATCGAATGAGGAATCAAGT
Downstream 100 bases:
>100_bases TCATTTATATGGTTTTTGTTTGATCTGAAATGTATAGGTCCGATCACTCGATTGGAGGACTACTTGTGCATAAAATCCTA AGTCAAGGGACCGAAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQQGNPIVMGIHEIPKFDSEGL IRALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVYYGVNDESYMEEYPAVNLEV
Sequences:
>Translated_139_residues MANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQQGNPIVMGIHEIPKFDSEGL IRALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVYYGVNDESYMEEYPAVNLEV >Mature_138_residues ANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQQGNPIVMGIHEIPKFDSEGLI RALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVYYGVNDESYMEEYPAVNLEV
Specific function: Unknown
COG id: COG5562
COG function: function code R; Phage envelope protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15572; Mature: 15441
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQ CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEE QGNPIVMGIHEIPKFDSEGLIRALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVY CCCCEEEEHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE YGVNDESYMEEYPAVNLEV EECCCHHHHHHCCCCCCCC >Mature Secondary Structure ANLTTKLIEAQKLAMSLRPKVGGFLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQ CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEE QGNPIVMGIHEIPKFDSEGLIRALRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVY CCCCEEEEHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE YGVNDESYMEEYPAVNLEV EECCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]