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The map label for this gene is slyA [C]

Identifier: 183220905

GI number: 183220905

Start: 1583522

End: 1583992

Strand: Direct

Name: slyA [C]

Synonym: LEPBI_I1518

Alternate gene names: 183220905

Gene position: 1583522-1583992 (Clockwise)

Preceding gene: 183220904

Following gene: 183220906

Centisome position: 43.99

GC content: 42.68

Gene sequence:

>471_bases
ATGGCGAAACAAAAAACATCCGAACCAAGCCAATTAAAATCTCACCTTGGTTATCATTTGCGAGTTGTTTCCAATGCCGT
TTCCCATTCCTTTGCAAAAAAACTAACCAATTGGGATGTGACAGTCGCAGAATGGGTCATCTTACGTGAGATGTATTCAT
ACAAGGAAAATTCATCTCCGAGCATTGTTGCGGAGTTTACGGGTCTGAGTCGTGGTGCCGTTTCGAAGCTCATCGAACGA
TTGTTGCAAAAAGGCCTTGTGAGTCGAGAGGAAGCGGCAATTGACCGCCGATACCAAGAAATCAAACTCACAAAAGAAGG
AAGGAAACTTGTCCCAAAGCTTTCCGAGATTGCCGACGAAAACGACATTTCCTATTTTTCTGTACTTTCACAAAAAGAAA
GGGAAGAGCTTCGCAAGATTCTTTCCAAACTAACAACAGCACACAAGCTCAATTTAACCCCAATCGAATGA

Upstream 100 bases:

>100_bases
TTTCCGTTGTGGCTTTCGACTCACTTTCATCTTTTGATTTTCTTTCAATTTTCATAATAGTTAACTTGACAATAGTTTCC
AAGGAAACTAAATTAAAGTT

Downstream 100 bases:

>100_bases
GGAATCAAGTATGGCAAACCTAACAACAAAATTAATAGAAGCTCAAAAATTGGCGATGTCGCTACGTCCGAAGGTAGGTG
GATTTCTAGTCCTTGCAGAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; MarR Family Transcriptional Regulator; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MAKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILREMYSYKENSSPSIVAEFTGLSRGAVSKLIER
LLQKGLVSREEAAIDRRYQEIKLTKEGRKLVPKLSEIADENDISYFSVLSQKEREELRKILSKLTTAHKLNLTPIE

Sequences:

>Translated_156_residues
MAKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILREMYSYKENSSPSIVAEFTGLSRGAVSKLIER
LLQKGLVSREEAAIDRRYQEIKLTKEGRKLVPKLSEIADENDISYFSVLSQKEREELRKILSKLTTAHKLNLTPIE
>Mature_155_residues
AKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILREMYSYKENSSPSIVAEFTGLSRGAVSKLIERL
LQKGLVSREEAAIDRRYQEIKLTKEGRKLVPKLSEIADENDISYFSVLSQKEREELRKILSKLTTAHKLNLTPIE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17829; Mature: 17698

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILREMYSYKENSSP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
SIVAEFTGLSRGAVSKLIERLLQKGLVSREEAAIDRRYQEIKLTKEGRKLVPKLSEIADE
CEEHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDISYFSVLSQKEREELRKILSKLTTAHKLNLTPIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILREMYSYKENSSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
SIVAEFTGLSRGAVSKLIERLLQKGLVSREEAAIDRRYQEIKLTKEGRKLVPKLSEIADE
CEEHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDISYFSVLSQKEREELRKILSKLTTAHKLNLTPIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA