Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220518
Identifier: 183220518
GI number: 183220518
Start: 1166359
End: 1168377
Strand: Direct
Name: 183220518
Synonym: LEPBI_I1119
Alternate gene names: NA
Gene position: 1166359-1168377 (Clockwise)
Preceding gene: 183220516
Following gene: 183220533
Centisome position: 32.4
GC content: 34.42
Gene sequence:
>2019_bases ATGACTGGAATTTCAATTTGGAACCAAGTTTCAGTTTTGGAAGATTCCAAACAATCGATCCCCGCTGAATCCATCATTCA TGGTGAAAGGGACCTTGAATTCAAATCTCTCAAATCCCCCAATTTAGGATTTTCGCAATCGGTGTATTGGGTGAGGTTCG AGATTTTCAATCCGACATCTCAATTGATTCGATGGAATTTGGCTTATGATTTCCCGCTCATCGATGAAATCCAATTGTTT GGAAGTCCCCTCCCTAAAGATTCCGTACGAACGCTGGGAGATTCATTTCCCTTTTCTCAAAGAAATGTAGATTATCGCAA TCCAGTGTTCCCTATGGAGACACCTCCTAACACTACGAATGTATATTATTTAAAGATAAAATCAGAATCAACAATTCCTT TGATTTTGGAACTTTGGACGGAAAAGGAATTCTATGAAAAGTTAAATAAAGAACAAATGATTTTCGGCATATTTTATGGA ATTTTATTTGTGATGATTGCTTATAATTTTTTCATTTATATTTTTACTTACGAAAAAAGTTATTTGTTATATCTATTTTT TATCAGTTCGATCTTTTTCTTCCATTTGGTTAACAATGGATTTGCGTTTCAATACATTTGGCCAAATTGGGTTTTTTGGG CGAATTATTCCTTGCCGTTTTTTATTTGTTTGTCTTGTATTACAGGAATTATTTTTACTAACAACTACTTAAGTTTAAAA AAGCATCTACCTAAGGTTTCGAAATTGATGTGGATTTGGGTTGGTATGCTGATTCTTTTTGTTGGGGTTTCCTTCTTCTT GCGATACCGAGTGGCGATGGTGGCTTCCATTTTAATGACGGTACCAACAGCGTTATTACTCGTATATAGTGGGACATATA CTTATCTTTCCAAGGTGAGAACTGCAAGGTATTATTTAATATCTTGGGCGTTTTTCCTCTTAGGAGTTTTATTATACTCT TTAAAAAGTTTAGGTTTTTTATCAGACAATCATATCACACGATGGACCATTCAAATTGGAACAGCACTACAGACGATTTT GTTATCACTTGGTCTTGCTGACAGAATCAATTTTTTAACTAGAAGCCTTCGAGAAAATTTACGTGATTTGTCACATGCAA AGGTGAAGATTGAGGAATCAGAAAAAAGATTCCGTGAAATTTTCCAAGGTTCTGACGAAGTCATTTTAATGATGAATGAA AATTTTGAAATCATCAATGCAAATCGGTCTTTGTCCAAACATTTAGGTTATCGATTGGATGATCTTAAATTCAAAAAAAT TACAGAGATTCTTTATACAGGCCGGGACCAAAAGTCAGATTATAATGTGATGTTTGTGAATGATAAACTGACTGATTTAA AAATGACAGGATCCGCCATCAATTTTAAGACAGAACTTTCTCAAAAGTATGTGAAAGAACCAAAGGAGATGGTATGCCGT ATCCAATACATTGACTTTGATGAGACAAGAGAAGTTCTCATGACCTTGTCACCTGAGTATGAAGATACCATCATCCAATT GATTGATTCCGAAAAAATAGAACTTTCGATGAATAATTACCTTCGAAATGCAGAACTTGTCTCCCAAAAAATCACAGCAC AATTAGCAAAATATCTCACTACAATTGAACAAACTGAAGTTAGGTCATCTGTAAGGGAGATCATCATCAATGCGGTGGAA CATGGAAATTTAAATATTAGTTTTGATGAAAAATCAAAAGCTCTTTTGGAAGGAAATTATTTAGAGTTTTTGCAAAAAAG GCAAGAAGACCCTAGATATCGCAATAAAAAGGTGAAAATCGAATATTCGTTTAGCAGTGAATATGTGGCGTTTCGCATCA CAGATGAAGGAAAGGGCTTTGATCATAAAAAACATATGGAGAAATCCATCGAAGAAATGAATGAAGCGCACGTGCAACAT GGACGTGGGATTCTTATGACAAAATCTGTTTTTGATCGGATTGAATACAATGACAAAGGAAATCAAGTCAGTTTGATTAA GTTTTTAAACCGAGATTAA
Upstream 100 bases:
>100_bases CATTGTTTTCTCTTCCTTTTCCTCCCTATGTACACTTGGATTCCTACTCTTTGTCCCAGGATTTTTGTCTGCCGCACCTA AAATCAATTTGGCTGCGGAA
Downstream 100 bases:
>100_bases TTTCTTTGCCAATCAAGAACCCACCACTCGTTCCATTCTTTGGAATAGAGGAGTTTACCAGGCAAGTGACTCTGTAATAA ACTTAAAAAATCATCTTTTT
Product: putative chemotaxis protein histidine kinase
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: Sensor Histidine Kinase; Response Regulator; GGDEF Domain-Containing Protein; Diverse 7TM Receptor Transmembrane Region; Signal Transduction Histidine Kinase; Response Regulator Receiver Protein; Periplasmic/7TM Domain Sensor Diguanylate Cyclase; Sensor Histidine Kinase/Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Phosphoserine Phosphatase; Response Regulator Receiver; Signal Transduction Protein; Adenylate/Guanylate Cyclase; Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Multi-Sensor Signal Transduction Multi-Kinase; Signal Protein; Two-Component Sensor; Integral Membrane Sensor Hybrid Histidine Kinase; 7TM Diverse Intracellular Signalling Domain Protein; Protein Serine/Threonine Phosphatase; Serine Phosphatase; Response Regulator With ATPase Domain; Response Regulator Receiver Modulated Serine Phosphatase; PAS Sensor Protein; Aerobic Respiration Sensor-Response Protein; Phosphoserine Phosphatase RsbP; Two-Component Sensor Histidine Kinase; Sensor Protein; Sensor/Response Regulator Hybrid; 7TM Receptor Family Protein; 7TM Domain Sensor Diguanylate Cyclase; AraC Family Transcriptional Regulator; Lost Adherence Sensor LadS; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component System Sensor Kinase; Integral Membrane Hybrid Histidine Protein Kinase; Sensory Transduction Histidine Kinase; Sensor/Response Regulator Hybrid Protein; Phosphoglycerate Transport; Transmembrane Signal Transduction Protein; Sensor Protein For Response Regulator AtoC; Signaling Protein With A Acyltransferase And GGDEF Domains; Periplasmic Sensor Hybrid Histidine Kinase; Diverse 7tm Receptor Transmembrane Region; Methyl-Accepting Chemotaxis Sensory Transducer; Chromosome Segregation ATPase; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 672; Mature: 671
Protein sequence:
>672_residues MTGISIWNQVSVLEDSKQSIPAESIIHGERDLEFKSLKSPNLGFSQSVYWVRFEIFNPTSQLIRWNLAYDFPLIDEIQLF GSPLPKDSVRTLGDSFPFSQRNVDYRNPVFPMETPPNTTNVYYLKIKSESTIPLILELWTEKEFYEKLNKEQMIFGIFYG ILFVMIAYNFFIYIFTYEKSYLLYLFFISSIFFFHLVNNGFAFQYIWPNWVFWANYSLPFFICLSCITGIIFTNNYLSLK KHLPKVSKLMWIWVGMLILFVGVSFFLRYRVAMVASILMTVPTALLLVYSGTYTYLSKVRTARYYLISWAFFLLGVLLYS LKSLGFLSDNHITRWTIQIGTALQTILLSLGLADRINFLTRSLRENLRDLSHAKVKIEESEKRFREIFQGSDEVILMMNE NFEIINANRSLSKHLGYRLDDLKFKKITEILYTGRDQKSDYNVMFVNDKLTDLKMTGSAINFKTELSQKYVKEPKEMVCR IQYIDFDETREVLMTLSPEYEDTIIQLIDSEKIELSMNNYLRNAELVSQKITAQLAKYLTTIEQTEVRSSVREIIINAVE HGNLNISFDEKSKALLEGNYLEFLQKRQEDPRYRNKKVKIEYSFSSEYVAFRITDEGKGFDHKKHMEKSIEEMNEAHVQH GRGILMTKSVFDRIEYNDKGNQVSLIKFLNRD
Sequences:
>Translated_672_residues MTGISIWNQVSVLEDSKQSIPAESIIHGERDLEFKSLKSPNLGFSQSVYWVRFEIFNPTSQLIRWNLAYDFPLIDEIQLF GSPLPKDSVRTLGDSFPFSQRNVDYRNPVFPMETPPNTTNVYYLKIKSESTIPLILELWTEKEFYEKLNKEQMIFGIFYG ILFVMIAYNFFIYIFTYEKSYLLYLFFISSIFFFHLVNNGFAFQYIWPNWVFWANYSLPFFICLSCITGIIFTNNYLSLK KHLPKVSKLMWIWVGMLILFVGVSFFLRYRVAMVASILMTVPTALLLVYSGTYTYLSKVRTARYYLISWAFFLLGVLLYS LKSLGFLSDNHITRWTIQIGTALQTILLSLGLADRINFLTRSLRENLRDLSHAKVKIEESEKRFREIFQGSDEVILMMNE NFEIINANRSLSKHLGYRLDDLKFKKITEILYTGRDQKSDYNVMFVNDKLTDLKMTGSAINFKTELSQKYVKEPKEMVCR IQYIDFDETREVLMTLSPEYEDTIIQLIDSEKIELSMNNYLRNAELVSQKITAQLAKYLTTIEQTEVRSSVREIIINAVE HGNLNISFDEKSKALLEGNYLEFLQKRQEDPRYRNKKVKIEYSFSSEYVAFRITDEGKGFDHKKHMEKSIEEMNEAHVQH GRGILMTKSVFDRIEYNDKGNQVSLIKFLNRD >Mature_671_residues TGISIWNQVSVLEDSKQSIPAESIIHGERDLEFKSLKSPNLGFSQSVYWVRFEIFNPTSQLIRWNLAYDFPLIDEIQLFG SPLPKDSVRTLGDSFPFSQRNVDYRNPVFPMETPPNTTNVYYLKIKSESTIPLILELWTEKEFYEKLNKEQMIFGIFYGI LFVMIAYNFFIYIFTYEKSYLLYLFFISSIFFFHLVNNGFAFQYIWPNWVFWANYSLPFFICLSCITGIIFTNNYLSLKK HLPKVSKLMWIWVGMLILFVGVSFFLRYRVAMVASILMTVPTALLLVYSGTYTYLSKVRTARYYLISWAFFLLGVLLYSL KSLGFLSDNHITRWTIQIGTALQTILLSLGLADRINFLTRSLRENLRDLSHAKVKIEESEKRFREIFQGSDEVILMMNEN FEIINANRSLSKHLGYRLDDLKFKKITEILYTGRDQKSDYNVMFVNDKLTDLKMTGSAINFKTELSQKYVKEPKEMVCRI QYIDFDETREVLMTLSPEYEDTIIQLIDSEKIELSMNNYLRNAELVSQKITAQLAKYLTTIEQTEVRSSVREIIINAVEH GNLNISFDEKSKALLEGNYLEFLQKRQEDPRYRNKKVKIEYSFSSEYVAFRITDEGKGFDHKKHMEKSIEEMNEAHVQHG RGILMTKSVFDRIEYNDKGNQVSLIKFLNRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 78955; Mature: 78824
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGISIWNQVSVLEDSKQSIPAESIIHGERDLEFKSLKSPNLGFSQSVYWVRFEIFNPTS CCCCCHHHHHHHHHCHHHCCCHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCHH QLIRWNLAYDFPLIDEIQLFGSPLPKDSVRTLGDSFPFSQRNVDYRNPVFPMETPPNTTN HHEEEEEEECCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE VYYLKIKSESTIPLILELWTEKEFYEKLNKEQMIFGIFYGILFVMIAYNFFIYIFTYEKS EEEEEEECCCCCEEHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCH YLLYLFFISSIFFFHLVNNGFAFQYIWPNWVFWANYSLPFFICLSCITGIIFTNNYLSLK HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH KHLPKVSKLMWIWVGMLILFVGVSFFLRYRVAMVASILMTVPTALLLVYSGTYTYLSKVR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TARYYLISWAFFLLGVLLYSLKSLGFLSDNHITRWTIQIGTALQTILLSLGLADRINFLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCHHHHHHHHH RSLRENLRDLSHAKVKIEESEKRFREIFQGSDEVILMMNENFEIINANRSLSKHLGYRLD HHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCHHHHHCCCCCC DLKFKKITEILYTGRDQKSDYNVMFVNDKLTDLKMTGSAINFKTELSQKYVKEPKEMVCR CCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEEHHHHHHHHHHHCHHHHEEE IQYIDFDETREVLMTLSPEYEDTIIQLIDSEKIELSMNNYLRNAELVSQKITAQLAKYLT EEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH TIEQTEVRSSVREIIINAVEHGNLNISFDEKSKALLEGNYLEFLQKRQEDPRYRNKKVKI HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCCCEEEE EYSFSSEYVAFRITDEGKGFDHKKHMEKSIEEMNEAHVQHGRGILMTKSVFDRIEYNDKG EEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCC NQVSLIKFLNRD CEEEEHHHHCCC >Mature Secondary Structure TGISIWNQVSVLEDSKQSIPAESIIHGERDLEFKSLKSPNLGFSQSVYWVRFEIFNPTS CCCCHHHHHHHHHCHHHCCCHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCHH QLIRWNLAYDFPLIDEIQLFGSPLPKDSVRTLGDSFPFSQRNVDYRNPVFPMETPPNTTN HHEEEEEEECCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE VYYLKIKSESTIPLILELWTEKEFYEKLNKEQMIFGIFYGILFVMIAYNFFIYIFTYEKS EEEEEEECCCCCEEHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCH YLLYLFFISSIFFFHLVNNGFAFQYIWPNWVFWANYSLPFFICLSCITGIIFTNNYLSLK HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH KHLPKVSKLMWIWVGMLILFVGVSFFLRYRVAMVASILMTVPTALLLVYSGTYTYLSKVR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TARYYLISWAFFLLGVLLYSLKSLGFLSDNHITRWTIQIGTALQTILLSLGLADRINFLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCHHHHHHHHH RSLRENLRDLSHAKVKIEESEKRFREIFQGSDEVILMMNENFEIINANRSLSKHLGYRLD HHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCHHHHHCCCCCC DLKFKKITEILYTGRDQKSDYNVMFVNDKLTDLKMTGSAINFKTELSQKYVKEPKEMVCR CCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEEHHHHHHHHHHHCHHHHEEE IQYIDFDETREVLMTLSPEYEDTIIQLIDSEKIELSMNNYLRNAELVSQKITAQLAKYLT EEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH TIEQTEVRSSVREIIINAVEHGNLNISFDEKSKALLEGNYLEFLQKRQEDPRYRNKKVKI HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCCCEEEE EYSFSSEYVAFRITDEGKGFDHKKHMEKSIEEMNEAHVQHGRGILMTKSVFDRIEYNDKG EEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCC NQVSLIKFLNRD CEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA