Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is mdoC [H]
Identifier: 183220516
GI number: 183220516
Start: 1163671
End: 1164783
Strand: Direct
Name: mdoC [H]
Synonym: LEPBI_I1117
Alternate gene names: 183220516
Gene position: 1163671-1164783 (Clockwise)
Preceding gene: 183220513
Following gene: 183220518
Centisome position: 32.33
GC content: 32.08
Gene sequence:
>1113_bases ATGGGACGACTCATTTATTTAGATAATCTACGTTCTTTCGCATTATTGCTAGGAATCGTTTTTCATTCGGCAATTGTTTA TGCTGCCGATATCAAATACGCCATCCAAACCGAAGAAAGAAGTCAGATTCTGTCCTATTTTTGTTATTGGATTCATAGTT TCCGGATGCCTATGTTTTATATGATATCTGGATTTTTTTCTACAATGGTGATTGAGAAAAAAGGGACTAATTTCTATTGG GAGGGTAGATTCAAACGAGTTCTGATACCCACAATTTTTGGGCTGATATTTTTGGCTCCCATTCAATACTTTTTAATGGA AAAAATAAAATCACCAAACGTTGGTTTATTAGAGTTTTTATATTTATTTTTTACAAAGGAAAATTTCCAACATTCCCATA TTTGGTTTTTAGTGGATCTATTTTGTTTTAGTATGATTTTCCTCTTGGTTCACAAATGGATTCATAAAATAACAAATTGG GTACAATGGAAGACGTCCAATAGAAGAACATTTTTTTTACTTGGATTCAGTTTTATTTTGGTTCTTTTGGCCCACACTCA AATTGGGAAAGGGGAATCTTATTTTGGAATTTTTAAACTGACCTTTGTCTATCAGTTCACTTTTTTCCTTTCAGGTGTTT TTAGTTTTTATGGAAAAGATATCTTAATTTTGAGACCATCATCTCATCTGAAAACAATTGCCAACTTACTTTGGGCCATC ATTGTATCCGTTCTGTTTATGGATTTTGAAATTTTTGATCCACTCTGGATCTATTTTTCTTACGTGAATCCTTGGTATCG GTCTTTTCATATTTTTTTATGGGTGCTTTCGCCTTTTTTATGGACTATGTTTTTTGTATCTTTATTTGGATTTCTCGGAA ACAAGGAAGGTAAACTTGGTAGTTATATCATAGATGCAAGTTTGCCGATTTATCTATTGCATCATCCAATTTCTTTATCG TATGCATACATTGTGAGAGATTTACAATTTTCCATTTGGGAAAAGTTTCTCTTTCACAATGTAGTTGTGTTATGTTTCAG TTTTTTAATGTATGAATTTTTGATCCGAAGGAGCAAACCATTACGCTTTTTGTTCGGATTAAAAATTCATTAG
Upstream 100 bases:
>100_bases TTCTTCGTCATCGATGTCCGAAAAAAAAGGTTCGATTGGGGGTTCGGTCATGATTTAAAAAAATCTGTTTTTTTCTCTTC GTCAAGAAAAAGATGGAGGA
Downstream 100 bases:
>100_bases GTTTTACTAATCGCTTGGATCGACGACGCAACCGCTGAATCCATACTTCCTGTGTGTAAGGCGAGGTGTTCTCCTGCAAA AAATACCCTTTCGAATGGTT
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MGRLIYLDNLRSFALLLGIVFHSAIVYAADIKYAIQTEERSQILSYFCYWIHSFRMPMFYMISGFFSTMVIEKKGTNFYW EGRFKRVLIPTIFGLIFLAPIQYFLMEKIKSPNVGLLEFLYLFFTKENFQHSHIWFLVDLFCFSMIFLLVHKWIHKITNW VQWKTSNRRTFFLLGFSFILVLLAHTQIGKGESYFGIFKLTFVYQFTFFLSGVFSFYGKDILILRPSSHLKTIANLLWAI IVSVLFMDFEIFDPLWIYFSYVNPWYRSFHIFLWVLSPFLWTMFFVSLFGFLGNKEGKLGSYIIDASLPIYLLHHPISLS YAYIVRDLQFSIWEKFLFHNVVVLCFSFLMYEFLIRRSKPLRFLFGLKIH
Sequences:
>Translated_370_residues MGRLIYLDNLRSFALLLGIVFHSAIVYAADIKYAIQTEERSQILSYFCYWIHSFRMPMFYMISGFFSTMVIEKKGTNFYW EGRFKRVLIPTIFGLIFLAPIQYFLMEKIKSPNVGLLEFLYLFFTKENFQHSHIWFLVDLFCFSMIFLLVHKWIHKITNW VQWKTSNRRTFFLLGFSFILVLLAHTQIGKGESYFGIFKLTFVYQFTFFLSGVFSFYGKDILILRPSSHLKTIANLLWAI IVSVLFMDFEIFDPLWIYFSYVNPWYRSFHIFLWVLSPFLWTMFFVSLFGFLGNKEGKLGSYIIDASLPIYLLHHPISLS YAYIVRDLQFSIWEKFLFHNVVVLCFSFLMYEFLIRRSKPLRFLFGLKIH >Mature_369_residues GRLIYLDNLRSFALLLGIVFHSAIVYAADIKYAIQTEERSQILSYFCYWIHSFRMPMFYMISGFFSTMVIEKKGTNFYWE GRFKRVLIPTIFGLIFLAPIQYFLMEKIKSPNVGLLEFLYLFFTKENFQHSHIWFLVDLFCFSMIFLLVHKWIHKITNWV QWKTSNRRTFFLLGFSFILVLLAHTQIGKGESYFGIFKLTFVYQFTFFLSGVFSFYGKDILILRPSSHLKTIANLLWAII VSVLFMDFEIFDPLWIYFSYVNPWYRSFHIFLWVLSPFLWTMFFVSLFGFLGNKEGKLGSYIIDASLPIYLLHHPISLSY AYIVRDLQFSIWEKFLFHNVVVLCFSFLMYEFLIRRSKPLRFLFGLKIH
Specific function: Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family. OpgC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787285, Length=390, Percent_Identity=26.4102564102564, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: 2.1.-.- [C]
Molecular weight: Translated: 44342; Mature: 44211
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLIYLDNLRSFALLLGIVFHSAIVYAADIKYAIQTEERSQILSYFCYWIHSFRMPMFY CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCHHHH MISGFFSTMVIEKKGTNFYWEGRFKRVLIPTIFGLIFLAPIQYFLMEKIKSPNVGLLEFL HHHHHHHHHEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YLFFTKENFQHSHIWFLVDLFCFSMIFLLVHKWIHKITNWVQWKTSNRRTFFLLGFSFIL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHH VLLAHTQIGKGESYFGIFKLTFVYQFTFFLSGVFSFYGKDILILRPSSHLKTIANLLWAI HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH IVSVLFMDFEIFDPLWIYFSYVNPWYRSFHIFLWVLSPFLWTMFFVSLFGFLGNKEGKLG HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SYIIDASLPIYLLHHPISLSYAYIVRDLQFSIWEKFLFHNVVVLCFSFLMYEFLIRRSKP CEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRFLFGLKIH CEEEECCCCC >Mature Secondary Structure GRLIYLDNLRSFALLLGIVFHSAIVYAADIKYAIQTEERSQILSYFCYWIHSFRMPMFY CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCHHHH MISGFFSTMVIEKKGTNFYWEGRFKRVLIPTIFGLIFLAPIQYFLMEKIKSPNVGLLEFL HHHHHHHHHEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YLFFTKENFQHSHIWFLVDLFCFSMIFLLVHKWIHKITNWVQWKTSNRRTFFLLGFSFIL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHH VLLAHTQIGKGESYFGIFKLTFVYQFTFFLSGVFSFYGKDILILRPSSHLKTIANLLWAI HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH IVSVLFMDFEIFDPLWIYFSYVNPWYRSFHIFLWVLSPFLWTMFFVSLFGFLGNKEGKLG HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SYIIDASLPIYLLHHPISLSYAYIVRDLQFSIWEKFLFHNVVVLCFSFLMYEFLIRRSKP CEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRFLFGLKIH CEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA