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The map label for this gene is 183220412

Identifier: 183220412

GI number: 183220412

Start: 1053580

End: 1054404

Strand: Reverse

Name: 183220412

Synonym: LEPBI_I1008

Alternate gene names: NA

Gene position: 1054404-1053580 (Counterclockwise)

Preceding gene: 183220416

Following gene: 183220411

Centisome position: 29.29

GC content: 42.91

Gene sequence:

>825_bases
ATGGCCTCTCGTACCCCAGGATATGAACTTCGATTTGGACCTCCCATGGTCCCTGTTGTCCGCACTCTCATTTTCATCAA
TGTCATCTTCTTTATCCTCCAATTGGTGATCAAACTTACCTTCCACTCACCTCTGGTGGAACTCTATTTGGGACTCTCTC
CAGAACTCGTGTTCCGAGGTTGGGTCTGGCAACTTGTGAGTTATGCTTTTTTACACGGAAGTTTTTTACACATCCTCTTC
AATATGTTAAGCCTTTGGATGTTTGGGTCGGAACTGGCAGAAGTTTGGGGTGAACGAGCCTTTCTTAAATTTTATTTTTT
TACCGCATTCCTTGGTGGGATTGGTACCATCACAGCCCAATACTTTGGGATCCCCCAAGGTGTGGTCGTTGGAGCTAGTG
CTAGTATCTATGGATTACTTGTCGCTTACGGAATGACTTGGCCGAACAGAGAACTTCTCGTCTTTCTCATCTTTCCCATG
CGAGCCAAATACTTTGTGATGATTGTGATGCTTATGGTTCTTTTTGCGCAAGGAGAACGGGTGGCTCACTTTGCTCATTT
GGGTGGTGCGATTGGTGGTGTGATTTTAATGAAACTGTATACAGGTTGGAAAGGAACCAAATCTTCTCTTCCCACTTGGT
CACTCTCACGGTATTTACAAAAACGTAGATTTATGCGTTACCAAGAAGAGATGGCGAAACGAGAAAATGCCAAATCGAAA
GTGGATGAACTTTTGGAAAAAATTTCGAAAAACGGAATGGAATCTCTTTCTAGAAAAGAACGTAAGTTTTTAAACGAAGC
TAGCCAAAAATACTTCAACGAGTGA

Upstream 100 bases:

>100_bases
GCTCGCAATGGAACCGCGGACTCCGTAGAGTTGCACAATCACTTCCTCGATGCTAGGAAATCGACTTTCCTTGTCACTCA
AGATTTACGACCTTGAATTT

Downstream 100 bases:

>100_bases
ATCCAAAAGTATTTTTTTTCCCTCCGATCCCTCCAAGATCGCCTTATTATAATTTGGCGGTCGAGGAAGCCATCGCCGTA
AATTTAGTCAACTCACAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Rhomboid Family Protein; Peptidase; Integral Membrane Protein; Cytoplasmic Membrane Protein; Rhomboid-Like Protein; Rhomboid Protein; Membrane Serine Protease; Small Hydrophobic Molecule Transporter Protein; Serine Protease; Rhomboid Serine Protease

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MASRTPGYELRFGPPMVPVVRTLIFINVIFFILQLVIKLTFHSPLVELYLGLSPELVFRGWVWQLVSYAFLHGSFLHILF
NMLSLWMFGSELAEVWGERAFLKFYFFTAFLGGIGTITAQYFGIPQGVVVGASASIYGLLVAYGMTWPNRELLVFLIFPM
RAKYFVMIVMLMVLFAQGERVAHFAHLGGAIGGVILMKLYTGWKGTKSSLPTWSLSRYLQKRRFMRYQEEMAKRENAKSK
VDELLEKISKNGMESLSRKERKFLNEASQKYFNE

Sequences:

>Translated_274_residues
MASRTPGYELRFGPPMVPVVRTLIFINVIFFILQLVIKLTFHSPLVELYLGLSPELVFRGWVWQLVSYAFLHGSFLHILF
NMLSLWMFGSELAEVWGERAFLKFYFFTAFLGGIGTITAQYFGIPQGVVVGASASIYGLLVAYGMTWPNRELLVFLIFPM
RAKYFVMIVMLMVLFAQGERVAHFAHLGGAIGGVILMKLYTGWKGTKSSLPTWSLSRYLQKRRFMRYQEEMAKRENAKSK
VDELLEKISKNGMESLSRKERKFLNEASQKYFNE
>Mature_273_residues
ASRTPGYELRFGPPMVPVVRTLIFINVIFFILQLVIKLTFHSPLVELYLGLSPELVFRGWVWQLVSYAFLHGSFLHILFN
MLSLWMFGSELAEVWGERAFLKFYFFTAFLGGIGTITAQYFGIPQGVVVGASASIYGLLVAYGMTWPNRELLVFLIFPMR
AKYFVMIVMLMVLFAQGERVAHFAHLGGAIGGVILMKLYTGWKGTKSSLPTWSLSRYLQKRRFMRYQEEMAKRENAKSKV
DELLEKISKNGMESLSRKERKFLNEASQKYFNE

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31526; Mature: 31395

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASRTPGYELRFGPPMVPVVRTLIFINVIFFILQLVIKLTFHSPLVELYLGLSPELVFRG
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WVWQLVSYAFLHGSFLHILFNMLSLWMFGSELAEVWGERAFLKFYFFTAFLGGIGTITAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFGIPQGVVVGASASIYGLLVAYGMTWPNRELLVFLIFPMRAKYFVMIVMLMVLFAQGER
HHCCCCCCEECCCHHHHHHHHHHCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHCCCH
VAHFAHLGGAIGGVILMKLYTGWKGTKSSLPTWSLSRYLQKRRFMRYQEEMAKRENAKSK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDELLEKISKNGMESLSRKERKFLNEASQKYFNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA