Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220416
Identifier: 183220416
GI number: 183220416
Start: 1058604
End: 1059227
Strand: Reverse
Name: 183220416
Synonym: LEPBI_I1012
Alternate gene names: NA
Gene position: 1059227-1058604 (Counterclockwise)
Preceding gene: 183220417
Following gene: 183220412
Centisome position: 29.43
GC content: 37.66
Gene sequence:
>624_bases TTGGTTTTGTCTTTTTGCCTCTCCTGTTTTTGTACCCCAAAACTGGGATGGATTCGAACACTTCCATCTGATTTTCCAAG AGATTCGAAGTTACCGTTAGGAAACTATGAGAGACCTACGGAAAAAAAATCTGCCATGGGATCCAAAACCTTTCAATTGG TTTGGTCGGAAACCATCCATATCCTTACCGATCAAAAATTTAAAAAAGTTTGGAGAGAATGGCGGGTGTATGATGATCAT ATCTTGTTTCGCCAAATCATTGGGAAAGGTGAGTTTGAAAAATCGAATGATTGGGTTTTATTTTCCACAAAGGAATTGAA TACAAAGGAATGCCAAGTTCCCCTCACCCCAAAGCAGAAAACAAAACACCTCACCAAACGAATTCCTTGTGAAACATTTA CTTTGGATGAAACAAAAAAATTCCACCACAACTTACTGTATGATTATGACGGTCATTCCTTATATCCTCTCCAATATGAA TCAGGATACGTAGAAGCTAATTTTGGAATTGCTTGGGAATCGGATCTAGCGTATCAAAAAACGAAACTATTCGAAATTGC TAAATTGAAGTATGGAAAAAAAGAATTCCAACCCCACGTGTATCATCACGTGAAGTTGGATTGA
Upstream 100 bases:
>100_bases GGGGATGGTGGGCAAGATTTTATCTACTTCCAGTTCTAAACTAAATTCCATCAGAGAAACTCACTCCTCAAACAACCAAA AGAAGACGACCCTACTTCTT
Downstream 100 bases:
>100_bases TTCGAAGAAGAATCAAAAAAAGGGTAACCATCTCTAGAAAGAATCATAACAATATGGATTTTGGATTATCGAACGGCAAC CACAGCACATGCCTTTGCAA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MVLSFCLSCFCTPKLGWIRTLPSDFPRDSKLPLGNYERPTEKKSAMGSKTFQLVWSETIHILTDQKFKKVWREWRVYDDH ILFRQIIGKGEFEKSNDWVLFSTKELNTKECQVPLTPKQKTKHLTKRIPCETFTLDETKKFHHNLLYDYDGHSLYPLQYE SGYVEANFGIAWESDLAYQKTKLFEIAKLKYGKKEFQPHVYHHVKLD
Sequences:
>Translated_207_residues MVLSFCLSCFCTPKLGWIRTLPSDFPRDSKLPLGNYERPTEKKSAMGSKTFQLVWSETIHILTDQKFKKVWREWRVYDDH ILFRQIIGKGEFEKSNDWVLFSTKELNTKECQVPLTPKQKTKHLTKRIPCETFTLDETKKFHHNLLYDYDGHSLYPLQYE SGYVEANFGIAWESDLAYQKTKLFEIAKLKYGKKEFQPHVYHHVKLD >Mature_207_residues MVLSFCLSCFCTPKLGWIRTLPSDFPRDSKLPLGNYERPTEKKSAMGSKTFQLVWSETIHILTDQKFKKVWREWRVYDDH ILFRQIIGKGEFEKSNDWVLFSTKELNTKECQVPLTPKQKTKHLTKRIPCETFTLDETKKFHHNLLYDYDGHSLYPLQYE SGYVEANFGIAWESDLAYQKTKLFEIAKLKYGKKEFQPHVYHHVKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24590; Mature: 24590
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSFCLSCFCTPKLGWIRTLPSDFPRDSKLPLGNYERPTEKKSAMGSKTFQLVWSETIH CHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEEEEECCEEE ILTDQKFKKVWREWRVYDDHILFRQIIGKGEFEKSNDWVLFSTKELNTKECQVPLTPKQK EECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEECCCCHHH TKHLTKRIPCETFTLDETKKFHHNLLYDYDGHSLYPLQYESGYVEANFGIAWESDLAYQK HHHHHHHCCCCEEECCHHHHHHHCCEEEECCCEEEEEEECCCEEEECCCEEECCCCHHHH TKLFEIAKLKYGKKEFQPHVYHHVKLD HHHHHHHHHHCCHHHCCCCEEEEEECC >Mature Secondary Structure MVLSFCLSCFCTPKLGWIRTLPSDFPRDSKLPLGNYERPTEKKSAMGSKTFQLVWSETIH CHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEEEEECCEEE ILTDQKFKKVWREWRVYDDHILFRQIIGKGEFEKSNDWVLFSTKELNTKECQVPLTPKQK EECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEECCCCHHH TKHLTKRIPCETFTLDETKKFHHNLLYDYDGHSLYPLQYESGYVEANFGIAWESDLAYQK HHHHHHHCCCCEEECCHHHHHHHCCEEEECCCEEEEEEECCCEEEECCCEEECCCCHHHH TKLFEIAKLKYGKKEFQPHVYHHVKLD HHHHHHHHHHCCHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA