Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220403
Identifier: 183220403
GI number: 183220403
Start: 1044540
End: 1045868
Strand: Reverse
Name: 183220403
Synonym: LEPBI_I0999
Alternate gene names: NA
Gene position: 1045868-1044540 (Counterclockwise)
Preceding gene: 183220406
Following gene: 183220402
Centisome position: 29.05
GC content: 35.44
Gene sequence:
>1329_bases ATGATTTACCGACTCTATCGTTCGTTTCTTGCCTTGTCCATCATTTCCTGTGCCCTTTCTGTTTCTCTTAGCCAACTTTT CTTACTGTTATCTTTTGTATTTTTTCTATTTCTCGAAAAAAAACCGAAACTTGCAGGGAACCTGGTAAAAATTCTATTTA TTTTTTACTCATGGCAAATTGTAACCGTTTTGTATCATTTCGCCGTTGCAGGGTTTGATACCACCTCCATCAAACATGCG TTTCGTGATGAAATGAAAGACATCTTCCTTGTGACTGCGTTTGTGTCTGTTCAAGGAATTAAGAAAGAAGATAAAACATT TTTATACAAAACATTTTTTGTTTTTTCCCTACTGATTGTTTTCACAGGTTTCATTTCTATATTTTCAATGACACGATTAT CGAGACTCATCTCTGATTTGTACAAAACATCTTCCTCTTGGCCTTACCAACACCATTACGGGAAAATCGGTAGTCTCAAT ATTTATCTCCCGATCGGACTAATGAATACCCACCTAACATTTGGCGGACTTCTAGCATTTGTATTTCCAGGTTTTGTATT CCGACTTTATGATGCCTGGTACAACAAAGCACCAAAACTCAAAATTTTTTCCCATGCCGTGTTACTCTTACTCATCTCCA TTGTATTTTTGTTTAATAATGCAAGGTCTTCTCTACTCGGTGCCCTCGTGAGTGTGTTTTTTGGAATTTATCTCTTAATT TTTTTTGATCAGGATATATCCAAAAAAGTACTCAAACGAACAGGAATTATCTTCTTATTTTTTTTGATAGTATTACTGAC CGGATACCAAACAACGAGCGCGGTGAAACGTGTTGTCGATCCACTCTTTGGAGGGGAAAAACACACGGATTCTGGTAGAA CCTTTATTTGGGACTCTACTTTTCCCTTAATCAAAAACAATCCCATTTTTGGAATTGGGTCTGGGAATTACCAAAAGGAG ATCGAAACATCTAGAAAAGAGAGAGAAAAAGAGAATCGAGAACTTGCTTTTTTTTACGAAGTGACCCAAAGAGGTCATGC TCATAATGATTACTTTCACTTAACGGCTGTTTTTGGTTTCCCACAGAGTATATTGTATCTATTTTTGTTTGGGACCATTT TATTTACATTACTTAGTGCCAATATTCCCAAATCAATTCGTTTTATGACCTACGGATTGGTTGGATTTTTCTTTTCCGGC CTTTTACAATGTTATTTCCAAGATGATGAAGTTCTCATCGTCTTTTATTTTCTGTTAGGTTATTTGAATTTATATGCGGA AGAAAATTTGAATTTAGAACATTCTCAAGAAAGGAACAAAATAGGATAA
Upstream 100 bases:
>100_bases GACACCGTCGGTTTTTGGCAAAAAAGTATCGGAAAAATATAAAACTCGCAACTGTTACCTCTTTACAAATGAGAGAAAAG GATTACTCTCATCCAAAGTT
Downstream 100 bases:
>100_bases ATACATGACATTAAAAAAATTATCTCCAAAAGGCGAATGGTTTGTAGATCCAAGTGGTAGAAAAGTCATCCTTCGAGGTG TGAACTTAGGCGGAGATACA
Product: putative lipid A core -O-antigen ligase
Products: NA
Alternate protein names: Exopolysaccharide Production Protein; Lipid A Core -O-Antigen Ligase
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MIYRLYRSFLALSIISCALSVSLSQLFLLLSFVFFLFLEKKPKLAGNLVKILFIFYSWQIVTVLYHFAVAGFDTTSIKHA FRDEMKDIFLVTAFVSVQGIKKEDKTFLYKTFFVFSLLIVFTGFISIFSMTRLSRLISDLYKTSSSWPYQHHYGKIGSLN IYLPIGLMNTHLTFGGLLAFVFPGFVFRLYDAWYNKAPKLKIFSHAVLLLLISIVFLFNNARSSLLGALVSVFFGIYLLI FFDQDISKKVLKRTGIIFLFFLIVLLTGYQTTSAVKRVVDPLFGGEKHTDSGRTFIWDSTFPLIKNNPIFGIGSGNYQKE IETSRKEREKENRELAFFYEVTQRGHAHNDYFHLTAVFGFPQSILYLFLFGTILFTLLSANIPKSIRFMTYGLVGFFFSG LLQCYFQDDEVLIVFYFLLGYLNLYAEENLNLEHSQERNKIG
Sequences:
>Translated_442_residues MIYRLYRSFLALSIISCALSVSLSQLFLLLSFVFFLFLEKKPKLAGNLVKILFIFYSWQIVTVLYHFAVAGFDTTSIKHA FRDEMKDIFLVTAFVSVQGIKKEDKTFLYKTFFVFSLLIVFTGFISIFSMTRLSRLISDLYKTSSSWPYQHHYGKIGSLN IYLPIGLMNTHLTFGGLLAFVFPGFVFRLYDAWYNKAPKLKIFSHAVLLLLISIVFLFNNARSSLLGALVSVFFGIYLLI FFDQDISKKVLKRTGIIFLFFLIVLLTGYQTTSAVKRVVDPLFGGEKHTDSGRTFIWDSTFPLIKNNPIFGIGSGNYQKE IETSRKEREKENRELAFFYEVTQRGHAHNDYFHLTAVFGFPQSILYLFLFGTILFTLLSANIPKSIRFMTYGLVGFFFSG LLQCYFQDDEVLIVFYFLLGYLNLYAEENLNLEHSQERNKIG >Mature_442_residues MIYRLYRSFLALSIISCALSVSLSQLFLLLSFVFFLFLEKKPKLAGNLVKILFIFYSWQIVTVLYHFAVAGFDTTSIKHA FRDEMKDIFLVTAFVSVQGIKKEDKTFLYKTFFVFSLLIVFTGFISIFSMTRLSRLISDLYKTSSSWPYQHHYGKIGSLN IYLPIGLMNTHLTFGGLLAFVFPGFVFRLYDAWYNKAPKLKIFSHAVLLLLISIVFLFNNARSSLLGALVSVFFGIYLLI FFDQDISKKVLKRTGIIFLFFLIVLLTGYQTTSAVKRVVDPLFGGEKHTDSGRTFIWDSTFPLIKNNPIFGIGSGNYQKE IETSRKEREKENRELAFFYEVTQRGHAHNDYFHLTAVFGFPQSILYLFLFGTILFTLLSANIPKSIRFMTYGLVGFFFSG LLQCYFQDDEVLIVFYFLLGYLNLYAEENLNLEHSQERNKIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51043; Mature: 51043
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYRLYRSFLALSIISCALSVSLSQLFLLLSFVFFLFLEKKPKLAGNLVKILFIFYSWQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VTVLYHFAVAGFDTTSIKHAFRDEMKDIFLVTAFVSVQGIKKEDKTFLYKTFFVFSLLIV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FTGFISIFSMTRLSRLISDLYKTSSSWPYQHHYGKIGSLNIYLPIGLMNTHLTFGGLLAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECHHHHHHHHHHHHHH VFPGFVFRLYDAWYNKAPKLKIFSHAVLLLLISIVFLFNNARSSLLGALVSVFFGIYLLI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFDQDISKKVLKRTGIIFLFFLIVLLTGYQTTSAVKRVVDPLFGGEKHTDSGRTFIWDST HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCC FPLIKNNPIFGIGSGNYQKEIETSRKEREKENRELAFFYEVTQRGHAHNDYFHLTAVFGF CCCEECCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCEEEEEHHCC PQSILYLFLFGTILFTLLSANIPKSIRFMTYGLVGFFFSGLLQCYFQDDEVLIVFYFLLG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YLNLYAEENLNLEHSQERNKIG HHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIYRLYRSFLALSIISCALSVSLSQLFLLLSFVFFLFLEKKPKLAGNLVKILFIFYSWQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VTVLYHFAVAGFDTTSIKHAFRDEMKDIFLVTAFVSVQGIKKEDKTFLYKTFFVFSLLIV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FTGFISIFSMTRLSRLISDLYKTSSSWPYQHHYGKIGSLNIYLPIGLMNTHLTFGGLLAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECHHHHHHHHHHHHHH VFPGFVFRLYDAWYNKAPKLKIFSHAVLLLLISIVFLFNNARSSLLGALVSVFFGIYLLI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFDQDISKKVLKRTGIIFLFFLIVLLTGYQTTSAVKRVVDPLFGGEKHTDSGRTFIWDST HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCC FPLIKNNPIFGIGSGNYQKEIETSRKEREKENRELAFFYEVTQRGHAHNDYFHLTAVFGF CCCEECCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCEEEEEHHCC PQSILYLFLFGTILFTLLSANIPKSIRFMTYGLVGFFFSGLLQCYFQDDEVLIVFYFLLG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YLNLYAEENLNLEHSQERNKIG HHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA