Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220406
Identifier: 183220406
GI number: 183220406
Start: 1047808
End: 1048857
Strand: Reverse
Name: 183220406
Synonym: LEPBI_I1002
Alternate gene names: NA
Gene position: 1048857-1047808 (Counterclockwise)
Preceding gene: 183220407
Following gene: 183220403
Centisome position: 29.14
GC content: 36.48
Gene sequence:
>1050_bases ATGTTCAAACGATTTAGGCATTTTTTCTCCGCAATCCACATCCAAAACTTTCAAAAAACAAAACTCACGAAAATCCAAAT CCTTTTTTTAATCTTATTGATTTGTTTTTCTACGAGAAATGATTATGCCGAAGAGTTTAGTTCCGAATTCCAACCGGTTT ACTTACCTTCACCGAACAAAAAAGAATACGAAAAACAAATCAAATGCCAAGTAGGATACTGTCGGGAAATTTTTTATTCA GAAGATGGCAAATACATGGAGGAAGTTTGGACGGAGTTAGGAAAAAACGGAGGGAAAGTAGTTGTCAACTTCTTACAATC TCCCATGTCTCTTTCCGAATCCAAAATGGATGGTATTACCGAATACCTCCGTGAAATCACAAAACGAGATGGACATGTTA GTTTTGAGCCATTTTATATTGCAACGCGCGGGATTGGGATGACCGAAGTTCCCGTTGTAAAAGATTTATTTGGTATATCG TATAATATTTATAAACGGATTCGCTCCCTCATTGTATTTGGCAGGATGGAACACTATAATGCAAAAGTACTGTTTCATCC AACAAATGGTAAAATATTACAAGTTTTCTTTTTCCATAAAAATTATGGGAATTTATGCGAAACGGTTTATTCTACTTGTG ACCGAATCGAGTACATGGATGACGAATTGTTTGACAAACAACTTTCTCTACGCTTGAGTGAATCGAAACATCGTGGAATT GAAATTTCATTTTCTCAAACTCCCGCCGTTTTACCGACAGCCAAACTTGATCTCAATCATCTACTCGATACCAATCGATC GGCAAGACTTTACAAATGGTTAATTGTTTCGAAAAAAACTGAGACAAAAACTGTCACAAAAGAAAGGTTTTTGACACTTG GTTTGGCAATTAAAACTTTAGATTACACTCTCAGTGCTTATGAATTGTTGGAGACCATCCAATTGTATTTGCCAGTCAGA TCCAAACAAGCAGAAGTCACTTACGAAGAAACCGAAGATGGCAAACAAGTTCGATCTGTGATCTTTTACCCTCTACCTAA TCTAGAGTAG
Upstream 100 bases:
>100_bases TCCTTTGGATGTGGTGAGACGAATTCGCCTCATCCAAAATGTAAACACTCTTTGGTGATTTGATTTGTGATACATTTGTA ATTGATATTTGGAGTCGGTG
Downstream 100 bases:
>100_bases TTGAAAAACTTTTTTGATGTTTTTGTCTAAACTTTACAAGTAAAACAAATACAAGGCAAGCAAGGCCTGCCGAACCAGGA AACAAAACAGTAGTTAGGTT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MFKRFRHFFSAIHIQNFQKTKLTKIQILFLILLICFSTRNDYAEEFSSEFQPVYLPSPNKKEYEKQIKCQVGYCREIFYS EDGKYMEEVWTELGKNGGKVVVNFLQSPMSLSESKMDGITEYLREITKRDGHVSFEPFYIATRGIGMTEVPVVKDLFGIS YNIYKRIRSLIVFGRMEHYNAKVLFHPTNGKILQVFFFHKNYGNLCETVYSTCDRIEYMDDELFDKQLSLRLSESKHRGI EISFSQTPAVLPTAKLDLNHLLDTNRSARLYKWLIVSKKTETKTVTKERFLTLGLAIKTLDYTLSAYELLETIQLYLPVR SKQAEVTYEETEDGKQVRSVIFYPLPNLE
Sequences:
>Translated_349_residues MFKRFRHFFSAIHIQNFQKTKLTKIQILFLILLICFSTRNDYAEEFSSEFQPVYLPSPNKKEYEKQIKCQVGYCREIFYS EDGKYMEEVWTELGKNGGKVVVNFLQSPMSLSESKMDGITEYLREITKRDGHVSFEPFYIATRGIGMTEVPVVKDLFGIS YNIYKRIRSLIVFGRMEHYNAKVLFHPTNGKILQVFFFHKNYGNLCETVYSTCDRIEYMDDELFDKQLSLRLSESKHRGI EISFSQTPAVLPTAKLDLNHLLDTNRSARLYKWLIVSKKTETKTVTKERFLTLGLAIKTLDYTLSAYELLETIQLYLPVR SKQAEVTYEETEDGKQVRSVIFYPLPNLE >Mature_349_residues MFKRFRHFFSAIHIQNFQKTKLTKIQILFLILLICFSTRNDYAEEFSSEFQPVYLPSPNKKEYEKQIKCQVGYCREIFYS EDGKYMEEVWTELGKNGGKVVVNFLQSPMSLSESKMDGITEYLREITKRDGHVSFEPFYIATRGIGMTEVPVVKDLFGIS YNIYKRIRSLIVFGRMEHYNAKVLFHPTNGKILQVFFFHKNYGNLCETVYSTCDRIEYMDDELFDKQLSLRLSESKHRGI EISFSQTPAVLPTAKLDLNHLLDTNRSARLYKWLIVSKKTETKTVTKERFLTLGLAIKTLDYTLSAYELLETIQLYLPVR SKQAEVTYEETEDGKQVRSVIFYPLPNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40908; Mature: 40908
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRFRHFFSAIHIQNFQKTKLTKIQILFLILLICFSTRNDYAEEFSSEFQPVYLPSPNK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCH KEYEKQIKCQVGYCREIFYSEDGKYMEEVWTELGKNGGKVVVNFLQSPMSLSESKMDGIT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH EYLREITKRDGHVSFEPFYIATRGIGMTEVPVVKDLFGISYNIYKRIRSLIVFGRMEHYN HHHHHHHCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC AKVLFHPTNGKILQVFFFHKNYGNLCETVYSTCDRIEYMDDELFDKQLSLRLSESKHRGI CEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE EISFSQTPAVLPTAKLDLNHLLDTNRSARLYKWLIVSKKTETKTVTKERFLTLGLAIKTL EEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DYTLSAYELLETIQLYLPVRSKQAEVTYEETEDGKQVRSVIFYPLPNLE HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHEEEECCCCCC >Mature Secondary Structure MFKRFRHFFSAIHIQNFQKTKLTKIQILFLILLICFSTRNDYAEEFSSEFQPVYLPSPNK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCH KEYEKQIKCQVGYCREIFYSEDGKYMEEVWTELGKNGGKVVVNFLQSPMSLSESKMDGIT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH EYLREITKRDGHVSFEPFYIATRGIGMTEVPVVKDLFGISYNIYKRIRSLIVFGRMEHYN HHHHHHHCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC AKVLFHPTNGKILQVFFFHKNYGNLCETVYSTCDRIEYMDDELFDKQLSLRLSESKHRGI CEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE EISFSQTPAVLPTAKLDLNHLLDTNRSARLYKWLIVSKKTETKTVTKERFLTLGLAIKTL EEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DYTLSAYELLETIQLYLPVRSKQAEVTYEETEDGKQVRSVIFYPLPNLE HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA