Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220402
Identifier: 183220402
GI number: 183220402
Start: 1042559
End: 1044535
Strand: Reverse
Name: 183220402
Synonym: LEPBI_I0998
Alternate gene names: NA
Gene position: 1044535-1042559 (Counterclockwise)
Preceding gene: 183220403
Following gene: 183220401
Centisome position: 29.02
GC content: 40.16
Gene sequence:
>1977_bases ATGACATTAAAAAAATTATCTCCAAAAGGCGAATGGTTTGTAGATCCAAGTGGTAGAAAAGTCATCCTTCGAGGTGTGAA CTTAGGCGGAGATACAAAGGTTCCTTATCCCAATGGTGGGACCCAATTTCCTACAGACTTTTCCGACCACAAAGAAGTGA GTTTTATTGGCCGACCATTCCCATTAGAAGAAGCAGATACACATTTCACTCGATTGAAATTATGGGGATTTAATGTATTA CGATTGTTGACTACTTGGGAAGCAGTAGAACACAAAGGTCCAAACTTGTATGATGACGATTATTTGGATTATTTCACAGA AATTGTTCGCCTAGCAGGAGAATACGGATTTTACGTATTTATCGATTTTCACCAAGATGTATGGTCAAGGATGACTGGTG GGGATGGAGCTCCGGGATGGATTTTTGAAAAACTAGGCATTGACTTTAAAAAACTCTCCGAGGCGGATGCAGCCATTGTC ATGCAACGTGCCTATGATTATTCAAACCCAGGCATACGACAAGAAAACAATTATCCAACTATGTGTTGGTCACAGAACTA TCGTTATGCCGGAAATGGCATTTTATGGACTTTGTTTTTTGGTGGCCGAGACTTTGCCCCCCATTTTTTGATCGATGGCA AAAATGTACAAGACTATCTGCAAGACCATTACCTTGGTTGTATGATTCAAATTGCAGAGAGAGTCAAACAATTTGATTTT GTATTAGGATTCGATTCATTAAATGAGCCAGGGAAAGGGTTTATTGGTCGTGCCATGAATGATCGAGGGTTAATCAACAA AGAAGAAGACCCAAGTAAACCTGGTCTTGCTTGGTCACCGATTGATGCTTTGTTTTCTTCTCATGGCCATTCGGTTGATT TACCTTACCTGACGCTAAAAGTTTGGAAAGGAGGATTTGTTCCAACAAAAACTGTAACCGTCAACCAAAAACAAGTTTCC ATTTGGTTACCTGAGTCTCCAGGAGATCCGTTCCAATTAGAAGGTGCTTATACAATCACAAAAGATGGCACTCCTTTCAT TGAAAAAAACGACTTCTTTCAAAAAGTAAATGGAAAGGAAATTGATTTTGATGCGGATTATCTCATTCCTTTTATGAGAA CTGTAGGTAAAACCATCCAAGCGATACGAAGTGATTGGATGGTTTTCATCGAAAGAGAAGCATCCGATGCCTTCATCCAT CCCCATTTGAATGGAGAAGTACCCAAACTATCTGTGAATGCGGCGCACTGGTACGACATCCTCACTCTTCTTTTCAAAAC TTTTTTATACCCAATCGCAATTGATACTCTCACCAAACGCCCAGTCTTCGGAAGATCAGGCATAGAGTCTATGTATGTTC GACAACTAACAAAAATTAAGAACACAGCTGATTCCGTGCCAGGTAAAATCCCAAGTCTTGTGGGTGAATTTGGAATTCCT TTCGACTTACAAGGTGGGAAGGCTTATAAAGAATGGAAAAAAGGAAACCATTCACCAAAAATATGGAAACGACATGTCAT GGCACTCGATGCTATGTACAATGCGATGGACAAATTATTTTTATCCAATACTCTTTGGAATTACACAGCTTCAAATGAAA ATGACTTAATGGTAGGAGATGGTTGGAACCAAGAAGACCTCAGTATCTTCTCAAAAGACCAATTGATTCCTGGTTCCGAC CCAGATGTTTATGGTGGTGGTGGGCGTGCGATCGAAGGTTTTTGCCGTCCCTATGCCGCTATGACACAAGGAACACCTAC AAAAATGGAGTACCAACTTGATACTCGTGAGTTTATTTTTGAATGGATCTCTGATCCAACGATACAGGAACCATGCGTGA TCAAAATTCCAAGGTTTGTTTACCCCAATGGCGTACAAACTGTACTTTCCAATGCTGAAAAAATTTCCGAAACAAAGGAA GAATTAACAGTCAAAGGAAATGGAGGGAAATCCTCGGTAATTGTTAGGCCATTATGA
Upstream 100 bases:
>100_bases CTCATCGTCTTTTATTTTCTGTTAGGTTATTTGAATTTATATGCGGAAGAAAATTTGAATTTAGAACATTCTCAAGAAAG GAACAAAATAGGATAAATAC
Downstream 100 bases:
>100_bases TTGATCTCAATACTATACTTCAAAAATACCCTTGGGAAGAAACTTGGAAATCCAAAGGAAAACCCATCGATTGTTTTTGG GAGTTCGATTTAACGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MTLKKLSPKGEWFVDPSGRKVILRGVNLGGDTKVPYPNGGTQFPTDFSDHKEVSFIGRPFPLEEADTHFTRLKLWGFNVL RLLTTWEAVEHKGPNLYDDDYLDYFTEIVRLAGEYGFYVFIDFHQDVWSRMTGGDGAPGWIFEKLGIDFKKLSEADAAIV MQRAYDYSNPGIRQENNYPTMCWSQNYRYAGNGILWTLFFGGRDFAPHFLIDGKNVQDYLQDHYLGCMIQIAERVKQFDF VLGFDSLNEPGKGFIGRAMNDRGLINKEEDPSKPGLAWSPIDALFSSHGHSVDLPYLTLKVWKGGFVPTKTVTVNQKQVS IWLPESPGDPFQLEGAYTITKDGTPFIEKNDFFQKVNGKEIDFDADYLIPFMRTVGKTIQAIRSDWMVFIEREASDAFIH PHLNGEVPKLSVNAAHWYDILTLLFKTFLYPIAIDTLTKRPVFGRSGIESMYVRQLTKIKNTADSVPGKIPSLVGEFGIP FDLQGGKAYKEWKKGNHSPKIWKRHVMALDAMYNAMDKLFLSNTLWNYTASNENDLMVGDGWNQEDLSIFSKDQLIPGSD PDVYGGGGRAIEGFCRPYAAMTQGTPTKMEYQLDTREFIFEWISDPTIQEPCVIKIPRFVYPNGVQTVLSNAEKISETKE ELTVKGNGGKSSVIVRPL
Sequences:
>Translated_658_residues MTLKKLSPKGEWFVDPSGRKVILRGVNLGGDTKVPYPNGGTQFPTDFSDHKEVSFIGRPFPLEEADTHFTRLKLWGFNVL RLLTTWEAVEHKGPNLYDDDYLDYFTEIVRLAGEYGFYVFIDFHQDVWSRMTGGDGAPGWIFEKLGIDFKKLSEADAAIV MQRAYDYSNPGIRQENNYPTMCWSQNYRYAGNGILWTLFFGGRDFAPHFLIDGKNVQDYLQDHYLGCMIQIAERVKQFDF VLGFDSLNEPGKGFIGRAMNDRGLINKEEDPSKPGLAWSPIDALFSSHGHSVDLPYLTLKVWKGGFVPTKTVTVNQKQVS IWLPESPGDPFQLEGAYTITKDGTPFIEKNDFFQKVNGKEIDFDADYLIPFMRTVGKTIQAIRSDWMVFIEREASDAFIH PHLNGEVPKLSVNAAHWYDILTLLFKTFLYPIAIDTLTKRPVFGRSGIESMYVRQLTKIKNTADSVPGKIPSLVGEFGIP FDLQGGKAYKEWKKGNHSPKIWKRHVMALDAMYNAMDKLFLSNTLWNYTASNENDLMVGDGWNQEDLSIFSKDQLIPGSD PDVYGGGGRAIEGFCRPYAAMTQGTPTKMEYQLDTREFIFEWISDPTIQEPCVIKIPRFVYPNGVQTVLSNAEKISETKE ELTVKGNGGKSSVIVRPL >Mature_657_residues TLKKLSPKGEWFVDPSGRKVILRGVNLGGDTKVPYPNGGTQFPTDFSDHKEVSFIGRPFPLEEADTHFTRLKLWGFNVLR LLTTWEAVEHKGPNLYDDDYLDYFTEIVRLAGEYGFYVFIDFHQDVWSRMTGGDGAPGWIFEKLGIDFKKLSEADAAIVM QRAYDYSNPGIRQENNYPTMCWSQNYRYAGNGILWTLFFGGRDFAPHFLIDGKNVQDYLQDHYLGCMIQIAERVKQFDFV LGFDSLNEPGKGFIGRAMNDRGLINKEEDPSKPGLAWSPIDALFSSHGHSVDLPYLTLKVWKGGFVPTKTVTVNQKQVSI WLPESPGDPFQLEGAYTITKDGTPFIEKNDFFQKVNGKEIDFDADYLIPFMRTVGKTIQAIRSDWMVFIEREASDAFIHP HLNGEVPKLSVNAAHWYDILTLLFKTFLYPIAIDTLTKRPVFGRSGIESMYVRQLTKIKNTADSVPGKIPSLVGEFGIPF DLQGGKAYKEWKKGNHSPKIWKRHVMALDAMYNAMDKLFLSNTLWNYTASNENDLMVGDGWNQEDLSIFSKDQLIPGSDP DVYGGGGRAIEGFCRPYAAMTQGTPTKMEYQLDTREFIFEWISDPTIQEPCVIKIPRFVYPNGVQTVLSNAEKISETKEE LTVKGNGGKSSVIVRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322197, Length=596, Percent_Identity=30.3691275167785, Blast_Score=249, Evalue=7e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74573; Mature: 74441
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKKLSPKGEWFVDPSGRKVILRGVNLGGDTKVPYPNGGTQFPTDFSDHKEVSFIGRPF CCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC PLEEADTHFTRLKLWGFNVLRLLTTWEAVEHKGPNLYDDDYLDYFTEIVRLAGEYGFYVF CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE IDFHQDVWSRMTGGDGAPGWIFEKLGIDFKKLSEADAAIVMQRAYDYSNPGIRQENNYPT EEECHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC MCWSQNYRYAGNGILWTLFFGGRDFAPHFLIDGKNVQDYLQDHYLGCMIQIAERVKQFDF EEECCCCEEECCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE VLGFDSLNEPGKGFIGRAMNDRGLINKEEDPSKPGLAWSPIDALFSSHGHSVDLPYLTLK EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEE VWKGGFVPTKTVTVNQKQVSIWLPESPGDPFQLEGAYTITKDGTPFIEKNDFFQKVNGKE EECCCCCCCEEEEECCEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHCCCCC IDFDADYLIPFMRTVGKTIQAIRSDWMVFIEREASDAFIHPHLNGEVPKLSVNAAHWYDI CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCCEEEECHHHHHHH LTLLFKTFLYPIAIDTLTKRPVFGRSGIESMYVRQLTKIKNTADSVPGKIPSLVGEFGIP HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC FDLQGGKAYKEWKKGNHSPKIWKRHVMALDAMYNAMDKLFLSNTLWNYTASNENDLMVGD EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECC GWNQEDLSIFSKDQLIPGSDPDVYGGGGRAIEGFCRPYAAMTQGTPTKMEYQLDTREFIF CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH EWISDPTIQEPCVIKIPRFVYPNGVQTVLSNAEKISETKEELTVKGNGGKSSVIVRPL HHHCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEECC >Mature Secondary Structure TLKKLSPKGEWFVDPSGRKVILRGVNLGGDTKVPYPNGGTQFPTDFSDHKEVSFIGRPF CCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC PLEEADTHFTRLKLWGFNVLRLLTTWEAVEHKGPNLYDDDYLDYFTEIVRLAGEYGFYVF CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE IDFHQDVWSRMTGGDGAPGWIFEKLGIDFKKLSEADAAIVMQRAYDYSNPGIRQENNYPT EEECHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC MCWSQNYRYAGNGILWTLFFGGRDFAPHFLIDGKNVQDYLQDHYLGCMIQIAERVKQFDF EEECCCCEEECCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE VLGFDSLNEPGKGFIGRAMNDRGLINKEEDPSKPGLAWSPIDALFSSHGHSVDLPYLTLK EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEE VWKGGFVPTKTVTVNQKQVSIWLPESPGDPFQLEGAYTITKDGTPFIEKNDFFQKVNGKE EECCCCCCCEEEEECCEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHCCCCC IDFDADYLIPFMRTVGKTIQAIRSDWMVFIEREASDAFIHPHLNGEVPKLSVNAAHWYDI CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCCEEEECHHHHHHH LTLLFKTFLYPIAIDTLTKRPVFGRSGIESMYVRQLTKIKNTADSVPGKIPSLVGEFGIP HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC FDLQGGKAYKEWKKGNHSPKIWKRHVMALDAMYNAMDKLFLSNTLWNYTASNENDLMVGD EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECC GWNQEDLSIFSKDQLIPGSDPDVYGGGGRAIEGFCRPYAAMTQGTPTKMEYQLDTREFIF CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH EWISDPTIQEPCVIKIPRFVYPNGVQTVLSNAEKISETKEELTVKGNGGKSSVIVRPL HHHCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA