Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is ygcG [H]
Identifier: 183220293
GI number: 183220293
Start: 908143
End: 909828
Strand: Direct
Name: ygcG [H]
Synonym: LEPBI_I0888
Alternate gene names: 183220293
Gene position: 908143-909828 (Clockwise)
Preceding gene: 183220292
Following gene: 183220296
Centisome position: 25.23
GC content: 39.32
Gene sequence:
>1686_bases TTGCCAAAAATGAAAACTTGGTTATTGTTTTGCCCTATGCGTTTGGATCTGAAAACTTATTTTCAATGTCTTGCTACCTT CCTTTTGATTTTGACTCTTTTTGTGACAGAAGTCCAATCAAAGGAAATAAAAGTTCTAACAACACCCATCACCGATGAGG TTGGAATCTTCAGTGCCGATCAAATCACAAACTTACAATCCATAATAACAAACATAGAACAGAAAACAGGTGCACAAGTA TTTCTGTACATCATTCCAAGTTTGGAAGGGGAAAACTTAGAATCCTACTCCTTACAAGTCGCTGAAACCTCAAAGATTGG CCAGAAAGGAAAAGACAATGGAGTCCTCGTATTATTGTCGGTAGGAGACAGAAAGGTTCGGATTGAAGTGGGGTATGGGT TAGAAGAAACTCTAACGGACGTTTTGTGTAATCGGATCATCCGCAATATCATGATCCCTGAATTCAAAAAAGGAGACCTC CCGGGTGGGATTTTGCTCGGGTATACGGCCATTGAATCCATCCTACTTGGCGCGGCCGATACCAATCCCAATTTGCAAAC AGATTATCCAGACGGGATTGGATTTTCCTTCTCCCATGAGAATACTGTGAAAAACATTGGGATCGCCATTGGTGTCATCG TTGTGGCTGTGATTGGTTTTTTCCTTATGACCGACAGGAAACAATACAAACGAAACATTTGGTTAGAAGGTTTGTATGGC GGTGCCGTTTTTTTGGCTCTTTTGTATTTTTTACCCGATGCCGTATTTTATTTTTTCTGTTTTGGGATCGTTGCTTTAAA TTTGTATTTGTTATACGGACTTTGGGATTGGTATTCGTATCCACTTGCCATCCTTTCCCTTCTTTTTTGGATTCCTTTTT TGCAATTTAGTTTTCATACAGAATGGATTGTCCTCTTTTGGGTGATAGGGATCATCGGTTTGATTATGCTAGTCATTAAA CTATCGTTAGATGAAAATTTACAGGAAGCTTTTAGATCCTTCGCCAAAAAATTTGGGTTAACTGCGAGTGAACTTTTTTT TCATGGAGTAGCCTTTCTCAGTCTATCATTTGCCGTGGTTTCCATAATCAATGGGGAAAAACTATTTTTCATCTTTTACT ACCAGGGTTTACTTCTTTTTACCATTTATGGTTTTTCGATTTCCGTGTTTATGAAACATGCCCGCTGGTATGGGATTGGG TTTTTGGTTTGGTTTACTCTTGTCGCTTGTATCTTTTTCTTTTGGCCCATCTCAGAAGAAACATCCATTCCCATGGATTA CAATACTCTCTTCATTAGTTTTCAGTGGTTTTTCTGTTTGGTGTTAGGGTTTGTTTTGGCAAAAACCATCCAAGTGAAGA CTTGGAAAACTAGGTCCCTGAAGTATGGATTGATCTCTCTTGTTTGGACCTTCGGATTTTCAATTGAGGGAATATTAGGT TATACGGATACTTCTGCCTTTTCCATTTCCACATTTGTTTTTTCGTATTTTGTCTTACTTTTACTGCATTTCTTTTATGT GATGTGGGAAGAAGGTGATAGCGGATCCTATTCGTCATACTCTTCGGGTTCTAGTTCCTCTTCTAGTTACAGAAGTTCTT CGAGTTCCTACAGTTCGAGCTCAAGTTCTAGTTCTGGTGGCGGCGGAGGAAGTTTTGGAGGAGGAGGTAGTTCTGGTAGT TGGTAA
Upstream 100 bases:
>100_bases TTCCAATTTTCCCTTATTCAAAAACGTAATGGGTCCCATCTTTCGAATGGTGAGGTTAGTAAAAACATAATAAGACCTCA AATCCAAGAGAAAACTCTAC
Downstream 100 bases:
>100_bases GGATTCGACTTAATGTTTCCGCATGTTTTTGTCCGTTGACGCGTATTTTTTTCGTGTTAAGTCCCTTTCGGCATTGCCAA CGGAAGGATATTTTGTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MPKMKTWLLFCPMRLDLKTYFQCLATFLLILTLFVTEVQSKEIKVLTTPITDEVGIFSADQITNLQSIITNIEQKTGAQV FLYIIPSLEGENLESYSLQVAETSKIGQKGKDNGVLVLLSVGDRKVRIEVGYGLEETLTDVLCNRIIRNIMIPEFKKGDL PGGILLGYTAIESILLGAADTNPNLQTDYPDGIGFSFSHENTVKNIGIAIGVIVVAVIGFFLMTDRKQYKRNIWLEGLYG GAVFLALLYFLPDAVFYFFCFGIVALNLYLLYGLWDWYSYPLAILSLLFWIPFLQFSFHTEWIVLFWVIGIIGLIMLVIK LSLDENLQEAFRSFAKKFGLTASELFFHGVAFLSLSFAVVSIINGEKLFFIFYYQGLLLFTIYGFSISVFMKHARWYGIG FLVWFTLVACIFFFWPISEETSIPMDYNTLFISFQWFFCLVLGFVLAKTIQVKTWKTRSLKYGLISLVWTFGFSIEGILG YTDTSAFSISTFVFSYFVLLLLHFFYVMWEEGDSGSYSSYSSGSSSSSSYRSSSSSYSSSSSSSSGGGGGSFGGGGSSGS W
Sequences:
>Translated_561_residues MPKMKTWLLFCPMRLDLKTYFQCLATFLLILTLFVTEVQSKEIKVLTTPITDEVGIFSADQITNLQSIITNIEQKTGAQV FLYIIPSLEGENLESYSLQVAETSKIGQKGKDNGVLVLLSVGDRKVRIEVGYGLEETLTDVLCNRIIRNIMIPEFKKGDL PGGILLGYTAIESILLGAADTNPNLQTDYPDGIGFSFSHENTVKNIGIAIGVIVVAVIGFFLMTDRKQYKRNIWLEGLYG GAVFLALLYFLPDAVFYFFCFGIVALNLYLLYGLWDWYSYPLAILSLLFWIPFLQFSFHTEWIVLFWVIGIIGLIMLVIK LSLDENLQEAFRSFAKKFGLTASELFFHGVAFLSLSFAVVSIINGEKLFFIFYYQGLLLFTIYGFSISVFMKHARWYGIG FLVWFTLVACIFFFWPISEETSIPMDYNTLFISFQWFFCLVLGFVLAKTIQVKTWKTRSLKYGLISLVWTFGFSIEGILG YTDTSAFSISTFVFSYFVLLLLHFFYVMWEEGDSGSYSSYSSGSSSSSSYRSSSSSYSSSSSSSSGGGGGSFGGGGSSGS W >Mature_560_residues PKMKTWLLFCPMRLDLKTYFQCLATFLLILTLFVTEVQSKEIKVLTTPITDEVGIFSADQITNLQSIITNIEQKTGAQVF LYIIPSLEGENLESYSLQVAETSKIGQKGKDNGVLVLLSVGDRKVRIEVGYGLEETLTDVLCNRIIRNIMIPEFKKGDLP GGILLGYTAIESILLGAADTNPNLQTDYPDGIGFSFSHENTVKNIGIAIGVIVVAVIGFFLMTDRKQYKRNIWLEGLYGG AVFLALLYFLPDAVFYFFCFGIVALNLYLLYGLWDWYSYPLAILSLLFWIPFLQFSFHTEWIVLFWVIGIIGLIMLVIKL SLDENLQEAFRSFAKKFGLTASELFFHGVAFLSLSFAVVSIINGEKLFFIFYYQGLLLFTIYGFSISVFMKHARWYGIGF LVWFTLVACIFFFWPISEETSIPMDYNTLFISFQWFFCLVLGFVLAKTIQVKTWKTRSLKYGLISLVWTFGFSIEGILGY TDTSAFSISTFVFSYFVLLLLHFFYVMWEEGDSGSYSSYSSGSSSSSSYRSSSSSYSSSSSSSSGGGGGSFGGGGSSGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=161, Percent_Identity=31.6770186335404, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 62991; Mature: 62860
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKMKTWLLFCPMRLDLKTYFQCLATFLLILTLFVTEVQSKEIKVLTTPITDEVGIFSAD CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH QITNLQSIITNIEQKTGAQVFLYIIPSLEGENLESYSLQVAETSKIGQKGKDNGVLVLLS HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEEEEEHHHHCCCCCCCCCEEEEEE VGDRKVRIEVGYGLEETLTDVLCNRIIRNIMIPEFKKGDLPGGILLGYTAIESILLGAAD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC TNPNLQTDYPDGIGFSFSHENTVKNIGIAIGVIVVAVIGFFLMTDRKQYKRNIWLEGLYG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEEHH GAVFLALLYFLPDAVFYFFCFGIVALNLYLLYGLWDWYSYPLAILSLLFWIPFLQFSFHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EWIVLFWVIGIIGLIMLVIKLSLDENLQEAFRSFAKKFGLTASELFFHGVAFLSLSFAVV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SIINGEKLFFIFYYQGLLLFTIYGFSISVFMKHARWYGIGFLVWFTLVACIFFFWPISEE HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSIPMDYNTLFISFQWFFCLVLGFVLAKTIQVKTWKTRSLKYGLISLVWTFGFSIEGILG CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCEEEE YTDTSAFSISTFVFSYFVLLLLHFFYVMWEEGDSGSYSSYSSGSSSSSSYRSSSSSYSSS ECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCC SSSSSGGGGGSFGGGGSSGSW CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKMKTWLLFCPMRLDLKTYFQCLATFLLILTLFVTEVQSKEIKVLTTPITDEVGIFSAD CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH QITNLQSIITNIEQKTGAQVFLYIIPSLEGENLESYSLQVAETSKIGQKGKDNGVLVLLS HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEEEEEHHHHCCCCCCCCCEEEEEE VGDRKVRIEVGYGLEETLTDVLCNRIIRNIMIPEFKKGDLPGGILLGYTAIESILLGAAD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC TNPNLQTDYPDGIGFSFSHENTVKNIGIAIGVIVVAVIGFFLMTDRKQYKRNIWLEGLYG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEEHH GAVFLALLYFLPDAVFYFFCFGIVALNLYLLYGLWDWYSYPLAILSLLFWIPFLQFSFHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EWIVLFWVIGIIGLIMLVIKLSLDENLQEAFRSFAKKFGLTASELFFHGVAFLSLSFAVV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SIINGEKLFFIFYYQGLLLFTIYGFSISVFMKHARWYGIGFLVWFTLVACIFFFWPISEE HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSIPMDYNTLFISFQWFFCLVLGFVLAKTIQVKTWKTRSLKYGLISLVWTFGFSIEGILG CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCEEEE YTDTSAFSISTFVFSYFVLLLLHFFYVMWEEGDSGSYSSYSSGSSSSSSYRSSSSSYSSS ECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCC SSSSSGGGGGSFGGGGSSGSW CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]