Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is acrR [C]
Identifier: 183220292
GI number: 183220292
Start: 907411
End: 908112
Strand: Direct
Name: acrR [C]
Synonym: LEPBI_I0887
Alternate gene names: 183220292
Gene position: 907411-908112 (Clockwise)
Preceding gene: 183220287
Following gene: 183220293
Centisome position: 25.21
GC content: 37.18
Gene sequence:
>702_bases ATGCCTCAAACACTCAGAAGCCAAACCAATCCAAAGGGATTGAAACGAATTCCCAAACGGGAAGAAACCAAACAAAAGAT TTACCGAACCGCATTGGTACTTTTCCAAAGGGATGGGTATGAAGTCACAACCATGCGCAGGATTGCAAAAGAAGCCAAGG TTTCTCTTGGGCTTACTTATTATCATTTTCAATCGAAAGAAGATTTAGTGTTAGAGTTTTATAAAGGTTCGCAAAAAGAA TTGAAGAGACTTTGTGAATCGTATTTCAAAACCACAAAAGATTTTAAGACACGCTATAAATTTATCATCACAACCCAATT GGATCTTTTTTTTAGTCATAAAAAGTTTTTGCAAGTGCTTGCAAGACATGCTGGGGATCCAAATGATCCGTTATCTCCAT TTAGTATAGAGAGCGAAGGTTTACGAGAAGAGGCAGTGGGCATCATCCGACAAGCAATGGCCACTTCGAATTCCAAACTA CGCGAAGACTTAAGTAAAGTTTTACCGGATCTCTTATGGATGCAACAGATGGGAATTTTGTTTTATTGGTTAACGGATGC TTCAAAATCATTCCAAAATACAAAACTAATGATCCATGATTCATTGGACCTAACCTTTAAACTCATCAAACTTTCCAATT TTCCCTTATTCAAAAACGTAATGGGTCCCATCTTTCGAATGGTGAGGTTAGTAAAAACATAA
Upstream 100 bases:
>100_bases CAAATAAAAAAATGGCAAAAATATGTCATAATTGAACATGTTCAAATTAATCATTAGAATGAAAACCCTTCCAATTTCTA TGATGGAAAGAGATAAGTGA
Downstream 100 bases:
>100_bases TAAGACCTCAAATCCAAGAGAAAACTCTACTTGCCAAAAATGAAAACTTGGTTATTGTTTTGCCCTATGCGTTTGGATCT GAAAACTTATTTTCAATGTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAKEAKVSLGLTYYHFQSKEDLVLEFYKGSQKE LKRLCESYFKTTKDFKTRYKFIITTQLDLFFSHKKFLQVLARHAGDPNDPLSPFSIESEGLREEAVGIIRQAMATSNSKL REDLSKVLPDLLWMQQMGILFYWLTDASKSFQNTKLMIHDSLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT
Sequences:
>Translated_233_residues MPQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAKEAKVSLGLTYYHFQSKEDLVLEFYKGSQKE LKRLCESYFKTTKDFKTRYKFIITTQLDLFFSHKKFLQVLARHAGDPNDPLSPFSIESEGLREEAVGIIRQAMATSNSKL REDLSKVLPDLLWMQQMGILFYWLTDASKSFQNTKLMIHDSLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT >Mature_232_residues PQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAKEAKVSLGLTYYHFQSKEDLVLEFYKGSQKEL KRLCESYFKTTKDFKTRYKFIITTQLDLFFSHKKFLQVLARHAGDPNDPLSPFSIESEGLREEAVGIIRQAMATSNSKLR EDLSKVLPDLLWMQQMGILFYWLTDASKSFQNTKLMIHDSLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27349; Mature: 27218
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAKEAKVSLGLTY CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE YHFQSKEDLVLEFYKGSQKELKRLCESYFKTTKDFKTRYKFIITTQLDLFFSHKKFLQVL EEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHH ARHAGDPNDPLSPFSIESEGLREEAVGIIRQAMATSNSKLREDLSKVLPDLLWMQQMGIL HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FYWLTDASKSFQNTKLMIHDSLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT EEEHHHHHCCCCCCEEEEECCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAKEAKVSLGLTY CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE YHFQSKEDLVLEFYKGSQKELKRLCESYFKTTKDFKTRYKFIITTQLDLFFSHKKFLQVL EEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHH ARHAGDPNDPLSPFSIESEGLREEAVGIIRQAMATSNSKLREDLSKVLPDLLWMQQMGIL HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FYWLTDASKSFQNTKLMIHDSLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT EEEHHHHHCCCCCCEEEEECCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA