Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220296
Identifier: 183220296
GI number: 183220296
Start: 912010
End: 913734
Strand: Direct
Name: 183220296
Synonym: LEPBI_I0891
Alternate gene names: NA
Gene position: 912010-913734 (Clockwise)
Preceding gene: 183220293
Following gene: 183220297
Centisome position: 25.34
GC content: 39.88
Gene sequence:
>1725_bases TTGGGGCCTTTTTTCGCATTTGGAATCCTCTTTGCGTTTCCTAAAGAATTTCGATTACGCCTACGGGCCATATCCGTCAT TGCGATTTATGTTTTGAATTGGATCCTCTTTTATCCGGTGGAACTTTTGCACAGATCCAGTATGGAATGGGAAGGCACGA TTAATTCCTTCCTTGCAAAAGATGGCACTCCGTTCCGTATGAAGTTAGGATTTTTTCTTTTTTGTTTTTTCTGCCTTTTG GCAAATTACATCCACAGCATTCGAAGGAATCGAAAACGGGAATTGGTTCGAGAGGCCCGTATCCAAAATGATTTTCCAGG TTCAGGTCTTCGAACGGAAATGCGAATCAGGGATACAAAGTTCGATACCATTCTGCTTGTCCTTATTCTTGCTCTCATCA TTCAATTTTTCTTTTTGTACATCACAGAAAACCTAAACCCTCAAAAAAATCTTTCACCTCTTGCTCCACTTTATGATGTT CACCAGTTTGTTTTCAATTATTCGATTTCAATTTGTATTTTACTATTTAGCTTCAATCGAAATAAAATCCCATCATTGAT GGCAAGACCTTATTTGCGTTATATGGAAGGGATTCGGATCCGCGAAGCTTGGAAAAAGGCAGTCAAAACAGAAGGTAAAT TTCCACTTCGATTGGAACTCATAGTCAAAGAGAAGGCAAAGTTCCGAGATCAAATTTTACCTGGGTTTGGACATATTTAC GTTTATGAATATTGGCGTGGGTTTCCCATTTTATTTTTAACACTTTTGTTGTACTTATTTTCTGCGGTTTGGGTGTTTTC CTATATCAGTCCGATTTTTGGAATCCAGTTTTTGGCAGGGTTTGGATTAAAACCAGGGATTCCTGATAAAGATTTTTTTA TTTCATCGCAAAACGTGGCTTATGCGGTTTTTTCTGTGGCAGCACTGATTGGATTGTATTTTTATTCTGCAACCATCTTA GAGAAGTCCTTTAGTTTAGAAAACCTGGGAATCAAAAAAGATAAAGACGGCGAAAGTGAACCTTTCTTCAAACCGGGCCT TCGAAAAGGGTTTCGGAATGTATTGCCACTCTCTCTTCTATTTCATTTGGTTTTACTTTGCCTTGTTTTTTTAATCCCCA TTAGTATCCAACGTGGCAAAAAAAAGGAACAATCAGCACAAAAGAATGACCATTTCCGACCAGAAAAAATGGAATTTTAT TTCATCGATCCCAATGTCCCCGACGATACCCAAGGTTTGAATGGGGGAGTGATCACAGGGAATGAAACGGAAAACAAAGA GAAGGGTGAAAAAATCTCCAATGAAAAGGTCGCTGACAATGGACCTGTCAAAGGATACATCAAAAAAATCCGAGGGAAAA AAGTTCCACCCACGTATTCGAATTATATCTCCGCAAAAATGCGGATCCCTGAAAGTTATATGGATTATTGGGCCAAAGCC CCTCATCCCTATTCGAGTGTTGTTGCTTATACCATCACCCAAGATGGAGATGTGATTGATGTGGAACTCGTGGAAGCCTC TGATTATCCCGACCAAGATTTAAGAACCTTACAGCTGGTAGAGAGTTTGGGTCCACTCATGCCACCGCCAGGAACTAAGA ATGACATACGGGTCACGGAACTATTTTGGAACGGTCCCATCGATCCTGAGTTTGTCCCCACACCTTTACAAAAAGAAATG ATCAACTTATTTGACGGCCGTTATATGGAAGAGTTACCTGAATGA
Upstream 100 bases:
>100_bases GAGATAAGACTAAAGAATGGATTCGGCAAACTCTCAATACCTCTCTCCCTGGGCAAAAAAATCCTTAACGTTTTTCCTTT GGCTCTCACCCCTTTTCAGT
Downstream 100 bases:
>100_bases AAGAAATTGGATTCTACGATTATCTGATAGGTGCTGCAACAGTGCTTCCATGGGCCATTGTGATTTGGAAAGCTTACAAA CCTAAAAAAGGATGGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MGPFFAFGILFAFPKEFRLRLRAISVIAIYVLNWILFYPVELLHRSSMEWEGTINSFLAKDGTPFRMKLGFFLFCFFCLL ANYIHSIRRNRKRELVREARIQNDFPGSGLRTEMRIRDTKFDTILLVLILALIIQFFFLYITENLNPQKNLSPLAPLYDV HQFVFNYSISICILLFSFNRNKIPSLMARPYLRYMEGIRIREAWKKAVKTEGKFPLRLELIVKEKAKFRDQILPGFGHIY VYEYWRGFPILFLTLLLYLFSAVWVFSYISPIFGIQFLAGFGLKPGIPDKDFFISSQNVAYAVFSVAALIGLYFYSATIL EKSFSLENLGIKKDKDGESEPFFKPGLRKGFRNVLPLSLLFHLVLLCLVFLIPISIQRGKKKEQSAQKNDHFRPEKMEFY FIDPNVPDDTQGLNGGVITGNETENKEKGEKISNEKVADNGPVKGYIKKIRGKKVPPTYSNYISAKMRIPESYMDYWAKA PHPYSSVVAYTITQDGDVIDVELVEASDYPDQDLRTLQLVESLGPLMPPPGTKNDIRVTELFWNGPIDPEFVPTPLQKEM INLFDGRYMEELPE
Sequences:
>Translated_574_residues MGPFFAFGILFAFPKEFRLRLRAISVIAIYVLNWILFYPVELLHRSSMEWEGTINSFLAKDGTPFRMKLGFFLFCFFCLL ANYIHSIRRNRKRELVREARIQNDFPGSGLRTEMRIRDTKFDTILLVLILALIIQFFFLYITENLNPQKNLSPLAPLYDV HQFVFNYSISICILLFSFNRNKIPSLMARPYLRYMEGIRIREAWKKAVKTEGKFPLRLELIVKEKAKFRDQILPGFGHIY VYEYWRGFPILFLTLLLYLFSAVWVFSYISPIFGIQFLAGFGLKPGIPDKDFFISSQNVAYAVFSVAALIGLYFYSATIL EKSFSLENLGIKKDKDGESEPFFKPGLRKGFRNVLPLSLLFHLVLLCLVFLIPISIQRGKKKEQSAQKNDHFRPEKMEFY FIDPNVPDDTQGLNGGVITGNETENKEKGEKISNEKVADNGPVKGYIKKIRGKKVPPTYSNYISAKMRIPESYMDYWAKA PHPYSSVVAYTITQDGDVIDVELVEASDYPDQDLRTLQLVESLGPLMPPPGTKNDIRVTELFWNGPIDPEFVPTPLQKEM INLFDGRYMEELPE >Mature_573_residues GPFFAFGILFAFPKEFRLRLRAISVIAIYVLNWILFYPVELLHRSSMEWEGTINSFLAKDGTPFRMKLGFFLFCFFCLLA NYIHSIRRNRKRELVREARIQNDFPGSGLRTEMRIRDTKFDTILLVLILALIIQFFFLYITENLNPQKNLSPLAPLYDVH QFVFNYSISICILLFSFNRNKIPSLMARPYLRYMEGIRIREAWKKAVKTEGKFPLRLELIVKEKAKFRDQILPGFGHIYV YEYWRGFPILFLTLLLYLFSAVWVFSYISPIFGIQFLAGFGLKPGIPDKDFFISSQNVAYAVFSVAALIGLYFYSATILE KSFSLENLGIKKDKDGESEPFFKPGLRKGFRNVLPLSLLFHLVLLCLVFLIPISIQRGKKKEQSAQKNDHFRPEKMEFYF IDPNVPDDTQGLNGGVITGNETENKEKGEKISNEKVADNGPVKGYIKKIRGKKVPPTYSNYISAKMRIPESYMDYWAKAP HPYSSVVAYTITQDGDVIDVELVEASDYPDQDLRTLQLVESLGPLMPPPGTKNDIRVTELFWNGPIDPEFVPTPLQKEMI NLFDGRYMEELPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66376; Mature: 66245
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPFFAFGILFAFPKEFRLRLRAISVIAIYVLNWILFYPVELLHRSSMEWEGTINSFLAK CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC DGTPFRMKLGFFLFCFFCLLANYIHSIRRNRKRELVREARIQNDFPGSGLRTEMRIRDTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCH FDTILLVLILALIIQFFFLYITENLNPQKNLSPLAPLYDVHQFVFNYSISICILLFSFNR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NKIPSLMARPYLRYMEGIRIREAWKKAVKTEGKFPLRLELIVKEKAKFRDQILPGFGHIY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEE VYEYWRGFPILFLTLLLYLFSAVWVFSYISPIFGIQFLAGFGLKPGIPDKDFFISSQNVA EEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHH YAVFSVAALIGLYFYSATILEKSFSLENLGIKKDKDGESEPFFKPGLRKGFRNVLPLSLL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FHLVLLCLVFLIPISIQRGKKKEQSAQKNDHFRPEKMEFYFIDPNVPDDTQGLNGGVITG HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC NETENKEKGEKISNEKVADNGPVKGYIKKIRGKKVPPTYSNYISAKMRIPESYMDYWAKA CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHEECCHHHHHHHHCC PHPYSSVVAYTITQDGDVIDVELVEASDYPDQDLRTLQLVESLGPLMPPPGTKNDIRVTE CCCCCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEE LFWNGPIDPEFVPTPLQKEMINLFDGRYMEELPE EEECCCCCCCCCCCCHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure GPFFAFGILFAFPKEFRLRLRAISVIAIYVLNWILFYPVELLHRSSMEWEGTINSFLAK CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC DGTPFRMKLGFFLFCFFCLLANYIHSIRRNRKRELVREARIQNDFPGSGLRTEMRIRDTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCH FDTILLVLILALIIQFFFLYITENLNPQKNLSPLAPLYDVHQFVFNYSISICILLFSFNR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NKIPSLMARPYLRYMEGIRIREAWKKAVKTEGKFPLRLELIVKEKAKFRDQILPGFGHIY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEE VYEYWRGFPILFLTLLLYLFSAVWVFSYISPIFGIQFLAGFGLKPGIPDKDFFISSQNVA EEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHH YAVFSVAALIGLYFYSATILEKSFSLENLGIKKDKDGESEPFFKPGLRKGFRNVLPLSLL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FHLVLLCLVFLIPISIQRGKKKEQSAQKNDHFRPEKMEFYFIDPNVPDDTQGLNGGVITG HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC NETENKEKGEKISNEKVADNGPVKGYIKKIRGKKVPPTYSNYISAKMRIPESYMDYWAKA CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHEECCHHHHHHHHCC PHPYSSVVAYTITQDGDVIDVELVEASDYPDQDLRTLQLVESLGPLMPPPGTKNDIRVTE CCCCCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEE LFWNGPIDPEFVPTPLQKEMINLFDGRYMEELPE EEECCCCCCCCCCCCHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA