| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220290
Identifier: 183220290
GI number: 183220290
Start: 905159
End: 906208
Strand: Reverse
Name: 183220290
Synonym: LEPBI_I0885
Alternate gene names: NA
Gene position: 906208-905159 (Counterclockwise)
Preceding gene: 183220291
Following gene: 183220289
Centisome position: 25.17
GC content: 36.57
Gene sequence:
>1050_bases ATGAATGCAAAATATTTTCGCCCATTCAGTATCGGTCTCATCGCCTTAATTTTTTTATTTGTGATCTATCAATTCACAAA ATCCAATGAATTCGGTTCCGCCGAAGAAGAAAATCCCAATGACAAAGCAGAATCGTTTTTTCGAACACAAAGTGATGGGT TTTCGGTCGATCCTTTTTATTTAGAATCTGCAAAATCCATTTTTTCACCTGACGGACAATTTTTACGTTTTGATGATATC CTCGCCAAAGCAAAGTCAGGTGAACTCAATTTAATTTCTGAACTTTGGAATTTACGTAGGCAATGTCCCGAAGGAAGTAC AAGGGAACAATGCCATGAATACATCAAAGCCTTTATTCAAAATCAGTATTCCGGTGAGGATGCTAAAAAACTTTTGAACC TACTTACCAATTATTTAAAATATGAAGAAGCCATGGTGCAACTGGACCCAAGTTCTAAGTCTTATACCAACGCAGAAAGG TATGAACAAATCAAACAACTCCGAAGGAAATATTTTTCAAAGGAAGATGCAGAACTCATCTTTGGATTAGAAGAAGCCAC TGCGGATTTCAGTTTCAACCGAAAGAATTTTTTGGATGAAACCAAACATCTAAAGGCAGAAGAACGGATTCGATTGTATG AAGATTATCGCAAAAAATCCTTTGGTCCCTATTACAATGCTGTTGCCAGCCGGGAACCACAGTATGATAAATTTGAGACA GAGATGGACCTTCGCCAAGCGGAACTATCCAAACTATCGGGTACAGAACGTGATTCCAAAGAAAGAGAAGTTCGGATTCG TTATTTTGGTAAAGATGGCAATGAACGTATGGAAAAAGTTTTGAGAGAAATCAAAGAAGAAGAAGAAACAATCTCAAAGC TTGAGGTGGAAGAAAAGAACTTACTGAAAAATAACCCAAATCTTTCCGAATCGGAAAAAGAAAAAAAATTAATGGAATTA CGAATTAAAACTTTAGGAAGTAAGGAACTGGCGGAAGAATACACTCGACGATTGGAATATGAAAAAACACTTAAAAATTC CGGGAATTGA
Upstream 100 bases:
>100_bases AATAATCCAATTCTGAAGTTTTTTTAGAAAACCCAAGCAATTGCTTGGGTTTTTTTGTATCCAGAAATAATTTTTCATCG TTCACTACACTACAATCTCC
Downstream 100 bases:
>100_bases TTCACCGTATGTATATCTAATTCTTTCTGCAATTTGTTTTGCATTGTCCCTCGAACCCTTCGGTTTTGCCACCGCTGGGT TTTTCTGTTTATTTTTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNAKYFRPFSIGLIALIFLFVIYQFTKSNEFGSAEEENPNDKAESFFRTQSDGFSVDPFYLESAKSIFSPDGQFLRFDDI LAKAKSGELNLISELWNLRRQCPEGSTREQCHEYIKAFIQNQYSGEDAKKLLNLLTNYLKYEEAMVQLDPSSKSYTNAER YEQIKQLRRKYFSKEDAELIFGLEEATADFSFNRKNFLDETKHLKAEERIRLYEDYRKKSFGPYYNAVASREPQYDKFET EMDLRQAELSKLSGTERDSKEREVRIRYFGKDGNERMEKVLREIKEEEETISKLEVEEKNLLKNNPNLSESEKEKKLMEL RIKTLGSKELAEEYTRRLEYEKTLKNSGN
Sequences:
>Translated_349_residues MNAKYFRPFSIGLIALIFLFVIYQFTKSNEFGSAEEENPNDKAESFFRTQSDGFSVDPFYLESAKSIFSPDGQFLRFDDI LAKAKSGELNLISELWNLRRQCPEGSTREQCHEYIKAFIQNQYSGEDAKKLLNLLTNYLKYEEAMVQLDPSSKSYTNAER YEQIKQLRRKYFSKEDAELIFGLEEATADFSFNRKNFLDETKHLKAEERIRLYEDYRKKSFGPYYNAVASREPQYDKFET EMDLRQAELSKLSGTERDSKEREVRIRYFGKDGNERMEKVLREIKEEEETISKLEVEEKNLLKNNPNLSESEKEKKLMEL RIKTLGSKELAEEYTRRLEYEKTLKNSGN >Mature_349_residues MNAKYFRPFSIGLIALIFLFVIYQFTKSNEFGSAEEENPNDKAESFFRTQSDGFSVDPFYLESAKSIFSPDGQFLRFDDI LAKAKSGELNLISELWNLRRQCPEGSTREQCHEYIKAFIQNQYSGEDAKKLLNLLTNYLKYEEAMVQLDPSSKSYTNAER YEQIKQLRRKYFSKEDAELIFGLEEATADFSFNRKNFLDETKHLKAEERIRLYEDYRKKSFGPYYNAVASREPQYDKFET EMDLRQAELSKLSGTERDSKEREVRIRYFGKDGNERMEKVLREIKEEEETISKLEVEEKNLLKNNPNLSESEKEKKLMEL RIKTLGSKELAEEYTRRLEYEKTLKNSGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41222; Mature: 41222
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKYFRPFSIGLIALIFLFVIYQFTKSNEFGSAEEENPNDKAESFFRTQSDGFSVDPFY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH LESAKSIFSPDGQFLRFDDILAKAKSGELNLISELWNLRRQCPEGSTREQCHEYIKAFIQ HHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH NQYSGEDAKKLLNLLTNYLKYEEAMVQLDPSSKSYTNAERYEQIKQLRRKYFSKEDAELI HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH FGLEEATADFSFNRKNFLDETKHLKAEERIRLYEDYRKKSFGPYYNAVASREPQYDKFET HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH EMDLRQAELSKLSGTERDSKEREVRIRYFGKDGNERMEKVLREIKEEEETISKLEVEEKN HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKNNPNLSESEKEKKLMELRIKTLGSKELAEEYTRRLEYEKTLKNSGN HHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAKYFRPFSIGLIALIFLFVIYQFTKSNEFGSAEEENPNDKAESFFRTQSDGFSVDPFY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH LESAKSIFSPDGQFLRFDDILAKAKSGELNLISELWNLRRQCPEGSTREQCHEYIKAFIQ HHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH NQYSGEDAKKLLNLLTNYLKYEEAMVQLDPSSKSYTNAERYEQIKQLRRKYFSKEDAELI HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH FGLEEATADFSFNRKNFLDETKHLKAEERIRLYEDYRKKSFGPYYNAVASREPQYDKFET HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH EMDLRQAELSKLSGTERDSKEREVRIRYFGKDGNERMEKVLREIKEEEETISKLEVEEKN HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKNNPNLSESEKEKKLMELRIKTLGSKELAEEYTRRLEYEKTLKNSGN HHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA