| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220117
Identifier: 183220117
GI number: 183220117
Start: 715174
End: 716013
Strand: Reverse
Name: 183220117
Synonym: LEPBI_I0705
Alternate gene names: NA
Gene position: 716013-715174 (Counterclockwise)
Preceding gene: 183220119
Following gene: 183220116
Centisome position: 19.89
GC content: 33.57
Gene sequence:
>840_bases ATGTCGGGTTACAAAGTATCCTTTTTTATACTAGTCCTATGTTTCATATCCTCCCTTTATTCACAAAATCATTGGGAAGA TTATATAGCTGAAAAAAATATTGGATCCACCTATCCAATATTTGGTGATAATGTAAATCTAAGAGATGCAAGTAACATAA ACGGAAAGGTAATCAAAAAACTCAATTTAGGTAGTTCTGTTAAAGTCCTCACAAAAACGAACCAAATCTTAGAACAGAAT TCAGTAAAAGAATACTGGTATAAGGTACAAGTTGGTGAAGAGATAGGTTATCTTTGGGGTGGTTTAATTGCAGACTATTC GTTCCCATTCAAAGAATATTTGGTACTTTGTAAAAATCTAGGAATCAAAACTCGTAAATTAGAATTAAAAATCATTCAGG ATTCCAAACTTTTAAGCCACGGTAGTTGGGAAGTTGGCCCAATGAGCAATGAAACATGGGACCATACGATTTACGAATCC AAACAATTTTCACCAAGTCCAAATGCATTATTTGCTATCAAATTTTTAATCTTTTCAGAAATTGAGTATGGTTATTCAAA TGAACAAATATTCATTTTGAACTCAGAGAATAAAATTTCACCACAGTTTTCTTGGAATCCCGGAGCATGTGACCCACCAT CCTGTTCTGAGACATGGTTGGTATTTCCAAAGGATACTTTACCAGAAGATAAAAAGATCTCTCGTAAATTGGTAAAAGGG AAAGATAACACGATCATCGAAGTGATGCATAGTTTCGATGTGGAGGATCCAAACCAACATGACTATTACCAAACGGAATA TACTTGGAATGGATCATTATTTCAAAAAAAGGAAAAATAG
Upstream 100 bases:
>100_bases ACGAAGCTCTCTAAAAGTATCGTCTTCTATCGTTCAGAAAAATACCCTCCGAATCGAAAAGAGATCGACTCTCGTTCAAA AGTTCCCATTTTATAACACT
Downstream 100 bases:
>100_bases AATCGAATGAAAAAACAAATCATCATCGTAACTTTAATCGCTTTTTCATTTCCAAGTTTTGCTTGGAACAACCATGCAGG AATCACCTATCTAATCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSGYKVSFFILVLCFISSLYSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKKLNLGSSVKVLTKTNQILEQN SVKEYWYKVQVGEEIGYLWGGLIADYSFPFKEYLVLCKNLGIKTRKLELKIIQDSKLLSHGSWEVGPMSNETWDHTIYES KQFSPSPNALFAIKFLIFSEIEYGYSNEQIFILNSENKISPQFSWNPGACDPPSCSETWLVFPKDTLPEDKKISRKLVKG KDNTIIEVMHSFDVEDPNQHDYYQTEYTWNGSLFQKKEK
Sequences:
>Translated_279_residues MSGYKVSFFILVLCFISSLYSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKKLNLGSSVKVLTKTNQILEQN SVKEYWYKVQVGEEIGYLWGGLIADYSFPFKEYLVLCKNLGIKTRKLELKIIQDSKLLSHGSWEVGPMSNETWDHTIYES KQFSPSPNALFAIKFLIFSEIEYGYSNEQIFILNSENKISPQFSWNPGACDPPSCSETWLVFPKDTLPEDKKISRKLVKG KDNTIIEVMHSFDVEDPNQHDYYQTEYTWNGSLFQKKEK >Mature_278_residues SGYKVSFFILVLCFISSLYSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKKLNLGSSVKVLTKTNQILEQNS VKEYWYKVQVGEEIGYLWGGLIADYSFPFKEYLVLCKNLGIKTRKLELKIIQDSKLLSHGSWEVGPMSNETWDHTIYESK QFSPSPNALFAIKFLIFSEIEYGYSNEQIFILNSENKISPQFSWNPGACDPPSCSETWLVFPKDTLPEDKKISRKLVKGK DNTIIEVMHSFDVEDPNQHDYYQTEYTWNGSLFQKKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32230; Mature: 32099
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYKVSFFILVLCFISSLYSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKK CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEE LNLGSSVKVLTKTNQILEQNSVKEYWYKVQVGEEIGYLWGGLIADYSFPFKEYLVLCKNL ECCCCCEEEEEHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHC GIKTRKLELKIIQDSKLLSHGSWEVGPMSNETWDHTIYESKQFSPSPNALFAIKFLIFSE CCEEEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHH IEYGYSNEQIFILNSENKISPQFSWNPGACDPPSCSETWLVFPKDTLPEDKKISRKLVKG HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCC KDNTIIEVMHSFDVEDPNQHDYYQTEYTWNGSLFQKKEK CCCCEEEEHHHCCCCCCCCCCCEEEEEEECCCHHCCCCC >Mature Secondary Structure SGYKVSFFILVLCFISSLYSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKK CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEE LNLGSSVKVLTKTNQILEQNSVKEYWYKVQVGEEIGYLWGGLIADYSFPFKEYLVLCKNL ECCCCCEEEEEHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHC GIKTRKLELKIIQDSKLLSHGSWEVGPMSNETWDHTIYESKQFSPSPNALFAIKFLIFSE CCEEEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHH IEYGYSNEQIFILNSENKISPQFSWNPGACDPPSCSETWLVFPKDTLPEDKKISRKLVKG HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCC KDNTIIEVMHSFDVEDPNQHDYYQTEYTWNGSLFQKKEK CCCCEEEEHHHCCCCCCCCCCCEEEEEEECCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA